transcript:BL84057_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL84057_cuf0
Unique Nametranscript:BL84057_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL84057_cuf0

>transcript:BL84057_cuf0-protein ID=transcript:BL84057_cuf0-protein|Name=transcript:BL84057_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=110bp
FEISSVLCHFQTSFDSFFYPTSYTPALPLLHVVQSLIVFLYPIFSEQRRL
LEKCAATALSSKLIAHQQVFFAKMVVDAVMMLDELLPVNMIGMKKVTGGG
LEVGSDPMIP
Run BLAST on NCBI

mRNA from alignment at xfSc0013111:10..944+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL84057_cuf0 ID=transcript:BL84057_cuf0|Name=transcript:BL84057_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=935bp|location=Sequence derived from alignment at xfSc0013111:10..944+ (Branchiostoma lanceolatum)
CTTCGAAATTTCCTCTGTTTTGTGTCATTTTCAAACATCTTTCGATAGTT TTTTTTACCCAACCTCCTACACACCAGCCCTCCCCCTGCTACATGTTGTA CAGTCCCTTATTGTGTTTTTGTATCCTATCTTCAGTGAGCAGCGGAGACT ACTGGAGAAATGCGCAGCCACTGCCTTGAGCTCCAAGCTGATCGCCCACC AGCAGGTGTTCTTTGCCAAGATGGTTGTAGATGCCGTGATGATGCTGGAT GAGCTGCTGCCAGTCAATATGATTGGCATGAAGAAAGTTACCGGCGGTGG GCTGGAGGTGGGTTCTGACCCAATGATTCCATGATTCCATTGTTAGACTT TTCCTGAACTGAGGACCAAGACCAAGTTCATACCAGGATTTGAGAATCGG GATTCACCCAGGCACGGGATTGATCCTGATTTTCAACCGGTTTGACTCTT ACTCAGAGAGGGGTTAGTCCCGATCCACCAAACGGATCAGGCGGATCAAA TTGGAATCAATCCCGTGCCTGGGTGAATTGTGATTCGTGAATCCTGATTA TGAACTGGGCCTAAACCTTTGATTAATAAGATTTCGGAGACCTCATATCT CCATGAACTATTCTGATTATGCAAATGACTTTTACATAATACATTTACAT GATATATGCTTGGTCATGTACACCTTTAATTAACTTACACATGTCACAAT TTCGCCAGTTTTTCAGTCATTTACCACTTAGATGAATTATGACGCTTTTG CAATAATTATGCAAATTAGGAATTTATTTGCATGATTGGTATCTGTTTAT GTTCCCCATGCCATAAACTACATATATTACATGTATTTGAGTCCTATAAT GGAAAACACGGCAAATATAGATTTTCCTCATTAATTATGTAATTTAAGTC CCAATTTGCACTTCATCATGTACATTTCTGTTTAA

Coding sequence (CDS) from alignment at xfSc0013111:10..944+

>transcript:BL84057_cuf0 ID=transcript:BL84057_cuf0|Name=transcript:BL84057_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=333bp|location=Sequence derived from alignment at xfSc0013111:10..944+ (Branchiostoma lanceolatum)
TTCGAAATTTCCTCTGTTTTGTGTCATTTTCAAACATCTTTCGATAGTTT
TTTTTACCCAACCTCCTACACACCAGCCCTCCCCCTGCTACATGTTGTAC
AGTCCCTTATTGTGTTTTTGTATCCTATCTTCAGTGAGCAGCGGAGACTA
CTGGAGAAATGCGCAGCCACTGCCTTGAGCTCCAAGCTGATCGCCCACCA
GCAGGTGTTCTTTGCCAAGATGGTTGTAGATGCCGTGATGATGCTGGATG
AGCTGCTGCCAGTCAATATGATTGGCATGAAGAAAGTTACCGGCGGTGGG
CTGGAGGTGGGTTCTGACCCAATGATTCCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL84057gene:BL84057Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL84057_cuf0-E1BL84057_cuf0-E1-1564476830-542581Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL84057_cuf0transcript:BL84057_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0013111genomexfSc0013111:10..944 +
Properties
Property NameValue
Transcript idBL84057_cuf0
Biotypeprotein_coding