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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83832_cuf0 >transcript:BL83832_cuf0-protein ID=transcript:BL83832_cuf0-protein|Name=transcript:BL83832_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=132bp
KYKNHCYIMRDEEVPWFEASVLCTQSGANLVSIRDHNENEFITKLIYLAP
SEHVWIGLNDVHNNEILWTDGSRVSYTNWAPGEPNNHKNWLWSPAEKCGS
MYSKSGPVRGLPGQWNDDKCRFKFRFICKKPI Run BLAST on NCBI mRNA from alignment at Sc0000039:175089..177288- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83832_cuf0 ID=transcript:BL83832_cuf0|Name=transcript:BL83832_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2200bp|location=Sequence derived from alignment at Sc0000039:175089..177288- (Branchiostoma lanceolatum)
AAGTATAAGAACCACTGCTACATCATGAGAGATGAAGAAGTCCCCTGGTT
TGAAGCGAGCGTACTATGCACTCAGAGTGGGGCCAATCTGGTTTCTATCA
GAGACCACAACGAAAATGAGTTCATCACAAAACTCATCTATCTTGGTGGG
TGATGCTAACTTTTTTCAGTGCTGTACTTCAACGTCAGGTTTCTCCCACA
GACAGACGGACAGACAGACAGACAGACAGACAGACAGACAGACACTCTAA
AATCAAGGCGTCACTCCCTTGGAGATAAATTAAAAACACAAATCTTTGAG
CTATCACAACTATAGCCTTCTTTAGGTTGGAATGGTCATTTGTCTGACCA
AATGGACATTATTGAACCTTCGATCAATTGTCACATCATATGTTTGTTAA
ACCACGTTTCCTAAATGATTGTTCAATTTGAACATGTTAAAGTCAGTTAT
AGAGAAGGCATGGGGGATTTTTCCCACTTTGTTGTGGCACAGGTTAGGTT
TTGAGGATGTTAAAATTCTAACTTTTATCTGCAGCCCCCAGTGAACATGT
CTGGATTGGACTAAATGACGTCCACAACAATGAGATACTTTGGACGGATG
GATCACGTGTGAGCTACACTAACTGGGCACCGGGTGAACCAAACAACCAC
AAAAATTGGCTTTGGTCACCGGCAGAGAAGTGCGGCAGTATGTACTCTAA
GGTTTGTGCTCCTATTTTTATTCGTCTTTATGACCACCATTGACAAGGCT
CTGCTCTTGGAGACGTTTTGTTGTTTGTATCGACGTGTACGTGTGTTAGT
GTTTGTTGTTGAACAGCATGACTCGAGTACTCAAGAAACTACTATGAATT
GTTATGAAAGTCAGTGTGTTTGGCGATGATGGTGTGATTATAGGTTGTTA
CCTATGAAAGACATTAGATTTAGCCCCTCCTGGCGGCTTTCCTAAGTGAT
GCAGTTGAACCTTTTTTGAATCTAGTGCCAGGTCTACCTTGTCCCCTCCT
AGGTAGGTAGGTTTTGGGCATGTTACGGTGAAAGTTTTCATGCTTTCATA
TTTTTTCTCACGGTTTTCTTTCAGTAAAATCATTCAAATTCATTTCAGCT
GTAAGTCTTTTTGTAGAAAGCCAGCGTTAGGAGCCTAGGAAATGTAACCA
AATAGAGCAATAGTTATCTTTATCACACCTATTAATGCATATGTCATTTA
TACTCTGACAGTCTGGACCTGTCCGAGGCCTTCCCGGACAGTGGAACGAC
GATAAATGCCGCTTCAAGTTTCGCTTCATTTGCAAGAAGCCAATATAAGA
ATGGTCCAAAACTATATTTATTATCAGGCGCTGCACGTAGAAAAATAGTG
GTTATTATAATATTAATGGACCGTAGTATTGTCTAAGATAAAGGAAAATA
CAACAGAACCAGTACTTTCAACAAGAAAGTAAAATCATGACCGCTATGTA
TTTTAAGAAAGTACCATTGAGATTCATCATGGCATGGTGGATCATAGTAG
TGTTGTATTCTATTCACTTGTGCATGTGTTAAGATGATATGTTAGACAAG
GTTTGGAAGAATTAGGGCCGAAAGAGATGTGGTTATGATATACATAAGCC
GAATATGTAATCAAGAAAGTCGATTAAATGTAACGCTTTTGGTACAAAAT
TAGCCTGCGTTTACACAAGCTGTCGGCCGGAGGTTACTCCGGCGGTTACA
GGACCGGGTGGCCGCTAGGAGCGCCATTTGTCAGGCTAATACAAAATGGT
CTGTAAAATTGCTGTACCTATAATGCAAGTCGGTATTGCTTCTTAAAGCG
AAGTTGTAATTGTTGTTTACAGGGCACCACAACCCTGTTATAAAATTCAA
GCCGCAATTAGCTTTAAACGTCGGCATCTGCATGTCTTTATCTTTAAACA
TTTTACTGAAATGAAATGACATGAAAACAAGTATGACGTCATGAAGTAAA
CAAAAACATTAGGGGTTAGTTGTCAGCTGAAAATACTCTGATTTACTCTG
ATTCAAATGTAAAATCTGTGTAATTGTATCCAAAGCAAGAAACTGAAATG
TAAAAGCTTTTCTCTTTATGAGATACCTAATACATAAACAGCAATGTCTT
TGTGTGTAATTCAAGGTTCAAGGCACTGACAGGTTGCACATACCTGAAAA
CGTATGAACATCATGTTAACCTGGACAAAAGAAAAATAAATATAAACAAG
Coding sequence (CDS) from alignment at Sc0000039:175089..177288- >transcript:BL83832_cuf0 ID=transcript:BL83832_cuf0|Name=transcript:BL83832_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1197bp|location=Sequence derived from alignment at Sc0000039:175089..177288- (Branchiostoma lanceolatum)
AAGTATAAGAACCACTGCTACATCATGAGAGATGAAGAAGTCCCCTGGTT
TGAAGCGAGCGTACTATGCACTCAGAGTGGGGCCAATCTGGTTTCTATCA
GAGACCACAACGAAAATGAGTTCATCACAAAACTCATCTATCTTGCCCCC
AGTGAACATGTCTGGATTGGACTAAATGACGTCCACAACAATGAGATACT
TTGGACGGATGGATCACGTGTGAGCTACACTAACTGGGCACCGGGTGAAC
CAAACAACCACAAAAATTGGCTTTGGTCACCGGCAGAGAAGTGCGGCAGT
ATGTACTCTAAGTCTGGACCTGTCCGAGGCCTTCCCGGACAGTGGAACGA
CGATAAATGCCGCTTCAAGTTTCGCTTCATTTGCAAGAAGCCAATATAAA
AGTATAAGAACCACTGCTACATCATGAGAGATGAAGAAGTCCCCTGGTTT
GAAGCGAGCGTACTATGCACTCAGAGTGGGGCCAATCTGGTTTCTATCAG
AGACCACAACGAAAATGAGTTCATCACAAAACTCATCTATCTTGCCCCCA
GTGAACATGTCTGGATTGGACTAAATGACGTCCACAACAATGAGATACTT
TGGACGGATGGATCACGTGTGAGCTACACTAACTGGGCACCGGGTGAACC
AAACAACCACAAAAATTGGCTTTGGTCACCGGCAGAGAAGTGCGGCAGTA
TGTACTCTAAGTCTGGACCTGTCCGAGGCCTTCCCGGACAGTGGAACGAC
GATAAATGCCGCTTCAAGTTTCGCTTCATTTGCAAGAAGCCAATATAAAA
GTATAAGAACCACTGCTACATCATGAGAGATGAAGAAGTCCCCTGGTTTG
AAGCGAGCGTACTATGCACTCAGAGTGGGGCCAATCTGGTTTCTATCAGA
GACCACAACGAAAATGAGTTCATCACAAAACTCATCTATCTTGCCCCCAG
TGAACATGTCTGGATTGGACTAAATGACGTCCACAACAATGAGATACTTT
GGACGGATGGATCACGTGTGAGCTACACTAACTGGGCACCGGGTGAACCA
AACAACCACAAAAATTGGCTTTGGTCACCGGCAGAGAAGTGCGGCAGTAT
GTACTCTAAGTCTGGACCTGTCCGAGGCCTTCCCGGACAGTGGAACGACG
ATAAATGCCGCTTCAAGTTTCGCTTCATTTGCAAGAAGCCAATATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000039 | genome | Sc0000039:175089..177288 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83832_cuf0 |
| Biotype | protein_coding |
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