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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83807_cuf1 >transcript:BL83807_cuf1-protein ID=transcript:BL83807_cuf1-protein|Name=transcript:BL83807_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=292bp
MEVDDLLDTESLLFLIFILLYAVIFLFVKGRKLKSENVKLRQVNAELAAY
TQERPLVISPDKCTHCGRVTPHTVWMKLEVQDLKKLNHLLRACVEAREPR
TSHLLNEITSLQDLNRSLSTSANELLNNEDDLRVENMQLWAEVLELETTQ
EEKELQIRKLRITVREQRELASDLEHSLMVALDELQHQKRQRHKDAKRKS
SPNKTRKERKEPLPVVKQNAKEEKAKMEQCLEDERDRLRCAVCHDEDRRI
LLLPCKHFVLCGKCWGGVSRRVRRTCPICNSTVTDAMTIFLS Run BLAST on NCBI mRNA from alignment at Sc0000007:4417872..4420305+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83807_cuf1 ID=transcript:BL83807_cuf1|Name=transcript:BL83807_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2434bp|location=Sequence derived from alignment at Sc0000007:4417872..4420305+ (Branchiostoma lanceolatum)
TTGTTAACTAAGGTATGTGTGATAGCGAGGTTTTGCATGGTTCCTTGGCG
GTATCATCTTTAAATTTGATATAGATAGATAGCCATAATCTATCAAATCG
CACGTGTAGTTATCTACGCATGTTGTAATCTCCAAGCAGATGTGGGATTT
GGTCAGCTTTTACGTGTGTTTTTTAAATCTTTTTTAAACCTCTTTTAGTG
GTCCGCATTTTTCTTTGTCTTCCCAGAGCGGGCCACTAGAAATACCTATT
CTACGCCTCAATAACAAACGTAAACACTAAACTGAACCCTACATCTGCTT
GGAGATTGCGCAATCATACACTTCGAATTGGGTCACAAAATATGTTTTGT
CGATTGTGTTTCCTTTCTTGAGGAGAATGGGAGCAAATTTGGATGGATGG
ATAAAACGAAAGGTTTTTTTTGCCAATATTGTGACGAAAGCTAAACGTGG
TTGAAGAAATATAGTTTCTGTACTAAGGGTGACGTGGCATTGGGGCGCGA
TCCAAGAAAAACATTTTTACTATGTCTCAAAATGGCCGACAGAATGAATC
ATGTCCCAGAACTGTTTGAATGAAATCGTATAGAATATGCCAGTATGAGA
CAAAACAGTCCATAAGACTTGGTATATGTGGCCGTGATTTAAACCATATA
TAGTCAGTTTTTGCCGTTTTAGAAGGGTTGTATGTACCAAGGACTGTTTT
ACGAACACATTTGAAACAGTATGGCGGTGAGTGTTTTAATGTTATCGTGT
TCCTTTTATTTCCAGGAGTAGAAGAGCGAGCAGAAACAACTCGAACTGAA
ATCAAAAGTTGACAACAACTATGGAAGTTGATGATCTACTCGACACAGAA
TCCTTGCTCTTCCTCATATTCATTCTGCTATATGCTGTCATTTTCTTGTT
CGTCAAAGGGAGGAAATTGAAGAGCGAAAATGTCAAACTTCGCCAAGTCA
ATGCAGAACTCGCGGCTTATACTCAAGAGCGCCCCCTGGTCATTTCTCCA
GATAAATGCACCCACTGTGGCAGAGTGACCCCTCATACAGTATGGATGAA
ACTGGAAGTGCAAGACCTGAAGAAACTGAACCACCTTCTTCGCGCATGCG
TGGAGGCTAGAGAACCAAGAACAAGTCATCTCCTTAACGAGATTACGTCA
CTACAAGATCTCAACCGTTCCTTAAGTACGAGCGCAAATGAGTTGCTGAA
CAATGAAGACGATTTGCGGGTAGAAAACATGCAGCTTTGGGCAGAGGTAC
TTGAACTTGAAACCACGCAGGAGGAAAAAGAGCTCCAAATTCGTAAGCTT
CGAATCACAGTCCGAGAGCAGAGAGAGCTAGCATCCGATTTGGAACACAG
CCTGATGGTTGCACTGGATGAGCTTCAACACCAAAAAAGGCAACGCCACA
AAGACGCAAAGCGAAAGAGCTCGCCTAATAAAACTCGAAAAGAACGAAAA
GAGCCGCTTCCCGTAGTGAAACAAAACGCAAAAGAGGAGAAAGCAAAGAT
GGAGCAATGTTTGGAAGACGAGAGGGATAGATTACGGTGTGCAGTGTGTC
ACGATGAAGACAGGAGAATCTTACTCCTTCCCTGTAAACATTTTGTTCTG
TGTGGGAAGTGCTGGGGAGGGGTGAGTCGCCGTGTCAGGCGAACCTGCCC
CATCTGTAATTCCACCGTTACCGACGCCATGACAATTTTTCTGTCATGAA
AATGTTCCCGACATATATGTAGCCTTCGTAACCTCTACGTCTCCTAATGG
TCAGTTAGTCCTCAGTCTCGGTGAGCCAAGCTAGCTTGTCTTGAGCCTTG
ACTCGCGTTTTCTGACCTAGGGAGAAGAGATACTCTACCCGTCCTTTTCA
AATAATAACCCGTGACCTTGAAGTGACCTTCGGGTCGTAGTGACCTTTGA
GTAAAAAAAAGTTCCATGCACACCCGGACTCTTTAGAAACTCTATGTCTC
ATACTGCCACCCACCGAAGAACTTTTTTTACATACAACCGAGGACTGTGT
AACAGACTTCAAGGCTGTTGCGATTAGCGATATACAGAAATGTAAATGTG
AAGTCAATGTCTTGCTTAGTGTGTACTGATAGGGTCATGAGCTCCAGTGA
CTGCTGCTGATTCTGCGTGAAGACAAAAGTTTAAGATGTACATTATGTCC
AGTCCAACATGGCGGCCGATTAGATAAGACTACGTCACAGTCACGTGACT
TAAAACACATCAATGACATTGAACTCTATTCTAAGACGTACGTACTAGCA
TATATACCTGTATGCGGTTGAAATCCAGCGAAATTCCTCACATACGGCAT
TGTAATGCTAGACTGGACATTGTATAAGAGGCTTTGTAAATTTACAACAA
TATATGCAACAGCAGCCATACGCTTCAAAGTTTCATACACATTGTGTAAT
ATGAGACGAGTATTAAAAGCATAGTGAATAGCGC Coding sequence (CDS) from alignment at Sc0000007:4417872..4420305+ >transcript:BL83807_cuf1 ID=transcript:BL83807_cuf1|Name=transcript:BL83807_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=879bp|location=Sequence derived from alignment at Sc0000007:4417872..4420305+ (Branchiostoma lanceolatum)
ATGGAAGTTGATGATCTACTCGACACAGAATCCTTGCTCTTCCTCATATT
CATTCTGCTATATGCTGTCATTTTCTTGTTCGTCAAAGGGAGGAAATTGA
AGAGCGAAAATGTCAAACTTCGCCAAGTCAATGCAGAACTCGCGGCTTAT
ACTCAAGAGCGCCCCCTGGTCATTTCTCCAGATAAATGCACCCACTGTGG
CAGAGTGACCCCTCATACAGTATGGATGAAACTGGAAGTGCAAGACCTGA
AGAAACTGAACCACCTTCTTCGCGCATGCGTGGAGGCTAGAGAACCAAGA
ACAAGTCATCTCCTTAACGAGATTACGTCACTACAAGATCTCAACCGTTC
CTTAAGTACGAGCGCAAATGAGTTGCTGAACAATGAAGACGATTTGCGGG
TAGAAAACATGCAGCTTTGGGCAGAGGTACTTGAACTTGAAACCACGCAG
GAGGAAAAAGAGCTCCAAATTCGTAAGCTTCGAATCACAGTCCGAGAGCA
GAGAGAGCTAGCATCCGATTTGGAACACAGCCTGATGGTTGCACTGGATG
AGCTTCAACACCAAAAAAGGCAACGCCACAAAGACGCAAAGCGAAAGAGC
TCGCCTAATAAAACTCGAAAAGAACGAAAAGAGCCGCTTCCCGTAGTGAA
ACAAAACGCAAAAGAGGAGAAAGCAAAGATGGAGCAATGTTTGGAAGACG
AGAGGGATAGATTACGGTGTGCAGTGTGTCACGATGAAGACAGGAGAATC
TTACTCCTTCCCTGTAAACATTTTGTTCTGTGTGGGAAGTGCTGGGGAGG
GGTGAGTCGCCGTGTCAGGCGAACCTGCCCCATCTGTAATTCCACCGTTA
CCGACGCCATGACAATTTTTCTGTCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000007 | genome | Sc0000007:4417872..4420305 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83807_cuf1 |
| Biotype | protein_coding |
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