transcript:BL83723_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL83723_cuf0
Unique Nametranscript:BL83723_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL83723_cuf0

>transcript:BL83723_cuf0-protein ID=transcript:BL83723_cuf0-protein|Name=transcript:BL83723_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=104bp
QQEVVVDCLHCAVFFHVSFNHPTASHRAFCPFVRTSLKDEVCHVFPKTKC
FSTVSPSYLSGTSYLIWYLTICVRQSNQSSRSFKTSQYFTCSSYLPGGVD
SVSE
Run BLAST on NCBI

mRNA from alignment at Sc0000239:238982..239295+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL83723_cuf0 ID=transcript:BL83723_cuf0|Name=transcript:BL83723_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=314bp|location=Sequence derived from alignment at Sc0000239:238982..239295+ (Branchiostoma lanceolatum)
CGCAACAGGAAGTTGTGGTCGATTGCCTCCACTGTGCTGTGTTCTTCCAT
GTTTCTTTCAACCACCCCACAGCCAGCCACCGGGCATTCTGTCCATTTGT
TAGGACATCCCTTAAGGACGAGGTGTGCCATGTCTTTCCTAAAACAAAGT
GTTTTTCAACTGTCAGCCCCTCTTATCTGTCTGGGACTTCTTATCTCATC
TGGTATCTTACCATCTGTGTTCGACAGAGTAATCAATCCTCGCGGTCCTT
CAAAACCAGTCAGTACTTCACATGTTCCTCTTACCTCCCAGGGGGAGTTG
ACAGTGTTTCTGAG

Coding sequence (CDS) from alignment at Sc0000239:238982..239295+

>transcript:BL83723_cuf0 ID=transcript:BL83723_cuf0|Name=transcript:BL83723_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=312bp|location=Sequence derived from alignment at Sc0000239:238982..239295+ (Branchiostoma lanceolatum)
CAACAGGAAGTTGTGGTCGATTGCCTCCACTGTGCTGTGTTCTTCCATGT
TTCTTTCAACCACCCCACAGCCAGCCACCGGGCATTCTGTCCATTTGTTA
GGACATCCCTTAAGGACGAGGTGTGCCATGTCTTTCCTAAAACAAAGTGT
TTTTCAACTGTCAGCCCCTCTTATCTGTCTGGGACTTCTTATCTCATCTG
GTATCTTACCATCTGTGTTCGACAGAGTAATCAATCCTCGCGGTCCTTCA
AAACCAGTCAGTACTTCACATGTTCCTCTTACCTCCCAGGGGGAGTTGAC
AGTGTTTCTGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL83723gene:BL83723Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL83723_cuf0-E1BL83723_cuf0-E1-1564476830-403669Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL83723_cuf0transcript:BL83723_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000239genomeSc0000239:238982..239295 +
Properties
Property NameValue
Transcript idBL83723_cuf0
Biotypeprotein_coding