|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83720_cuf0 >transcript:BL83720_cuf0-protein ID=transcript:BL83720_cuf0-protein|Name=transcript:BL83720_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=109bp
MFFSIQSFIRCTPVYCLSNEWLQRLVSCFVAVYLSLKVGHIFDICGNQHF
WLTLMPSTCQSGMFFSIQSFIRSTLVYCLSNECLQRLVFCFVAVELFLKV
GHTLHIYRN Run BLAST on NCBI mRNA from alignment at Sc0000239:157975..159493+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83720_cuf0 ID=transcript:BL83720_cuf0|Name=transcript:BL83720_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1519bp|location=Sequence derived from alignment at Sc0000239:157975..159493+ (Branchiostoma lanceolatum)
CGAGCAGATGCTTGAATTTAACGTGAAAACAAAAACTGGGCTAAAAAGAG
CAACTATTCAGCTTTATTAGAATAGCTTTGAAGTTTTCAGAAATTCAAGT
TGAAGTGCTTGGGCAACCTACAAACAATACAGTGTTTGTAGCTTGTGAAA
AAATGTAATTTTGTCCCAACTTTGAAACGCTGTAAGTCCAAAAGTGGTGT
TTTGTTTTGCTTCAAATTTACATCATATATACATCCAAGTAGTAGCTATC
ATGTATCAGTTTTCAAATTTTGGTATCTTTTTTGGTTGTCACGTTACTGT
CCACAGAAGTAGGTCATTTTTTATGTTTGACGAAAAATATGATGTTGGGC
CATATTTAAAGCCCAATATATGGGAAAGTNAGTTGTCACGTTACTGTCCT
CAGAAGTAGGTCATTTTTTATGTTTGACGAAAAATGTGATGTTGGGCCAT
ATTTAAAGCCCAATATATGAGAAAGTAAAAAAGTGATTTAGTTTTAATTC
ATGTCAAAGGTAACCCTATGCATGTTTTATCAAATGAATGGTTGCAAAGG
TTGGTGTCTTGTTTCGTTGCTGTGTACTTGTCCCTAAAAGTAGGCCATAT
TTTCGACATATGCGGAAATCAACATTTTTGGCTAACTTTGAAGCCCTGAA
GATGTCAAAGTAGGATGTTTTTTCAATTCAATCTTTTATCAGATGTACCC
CTGTGTATTGTCTATCAAATGAATGGTTGCAAAGGTTGGTGTCTTGTTTC
GTTGCTGTGTACTTGTCCCTAAAAGTAGGCCATATTTTCGACATATGCGG
AAATCAACATTTTTGGCTAACTTTGAAGCCCTGAAGATGTCAAAGTAGGA
TGTTTTTTCGATTCAATCTTTTATCAGATGTACTCCTGTGTATTGTCTAT
CAAATGAATGGTTGCAAAGGTTGGTGTCTTGTTTCGTTGCTGTGTACTTG
TCCCTAAAAGTAGGCCATATTTTCGACATATGCGGAAAACAACATTTTTG
GCTAACTTTGAAGCCCTGAAGATGTCAAAGTGGGATGTTTTTTTCGATTC
AATCTTTTATCAGATGTACTCCTGTGTATTGTCTATCAAATGAATGGTTG
CAAAGGTTGGTGTCTTGTTTCGTTGCTGTGTACTTGTCCCTAAAAGTAGG
CCATATTTTTGACATATGCGGAAATCAACATTTTTGGCTAACGTTGATGC
CCTCAACATGTCAAAGTGGGATGTTTTTTTCAATTCAATCTTTTATCAGA
AGTACCCTTGTGTATTGTCTATCAAATGAATGCCTGCAAAGGTTGGTGTT
TTGTTTTGTTGCCGTGGAATTGTTCCTTAAAGTAGGCCATACTTTGCATA
TATACAGAAACTAGCGTTTTTTTGGCTAACTTTGTAGCCCTGAAAATGTC
AAAGTAGGATATCTTTTTAATTCCATCAACAGAAGTACCCCTGTGTATTG
TCTACCAAATGAATATTTTCTAAAGTTTGGTGTCTTGTCTCGTTGCAGTG
TACTTGTCCCTGAACGTAC Coding sequence (CDS) from alignment at Sc0000239:157975..159493+ >transcript:BL83720_cuf0 ID=transcript:BL83720_cuf0|Name=transcript:BL83720_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=330bp|location=Sequence derived from alignment at Sc0000239:157975..159493+ (Branchiostoma lanceolatum)
ATGTTTTTTTCGATTCAATCTTTTATCAGATGTACTCCTGTGTATTGTCT
ATCAAATGAATGGTTGCAAAGGTTGGTGTCTTGTTTCGTTGCTGTGTACT
TGTCCCTAAAAGTAGGCCATATTTTTGACATATGCGGAAATCAACATTTT
TGGCTAACGTTGATGCCCTCAACATGTCAAAGTGGGATGTTTTTTTCAAT
TCAATCTTTTATCAGAAGTACCCTTGTGTATTGTCTATCAAATGAATGCC
TGCAAAGGTTGGTGTTTTGTTTTGTTGCCGTGGAATTGTTCCTTAAAGTA
GGCCATACTTTGCATATATACAGAAACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000239 | genome | Sc0000239:157975..159493 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83720_cuf0 |
| Biotype | protein_coding |
|
