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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83713_cuf0 >transcript:BL83713_cuf0-protein ID=transcript:BL83713_cuf0-protein|Name=transcript:BL83713_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=293bp
GFSSCGDGGGFSSDTGGGFGGGFDHNSHHTSGGFAHGMHHGGHHGIGGPG
FHSHTPHHVSAVGGGTSFYTGPTFGAQNPGVAAACPFMFAFFFVVSGFIM
TVMGWSTGFGFSPILVIGPMFLCLGIVLCTVGCVCYRCRRQEAARQTGQS
TVQVVTSSGAPQPGPGGQTMMMHPTTVIGQGGPPQAYPGPTSAAGAVPNP
TGPPQPYPGYPPTMPGGYPPAGQPPYPPAATAPPTGYPPPGQPPYPLAGA
PPPPTGGLPPPSGYPPYGAAPPPGTSDVPPPPSYHEVTKGEKN Run BLAST on NCBI mRNA from alignment at Sc0000010:4742090..4745155+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83713_cuf0 ID=transcript:BL83713_cuf0|Name=transcript:BL83713_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3066bp|location=Sequence derived from alignment at Sc0000010:4742090..4745155+ (Branchiostoma lanceolatum)
GGGGTTCAGTAGTTGCGGGGACGGAGGCGGTTTCAGCTCGGACACGGGTG
GAGGTTTCGGCGGAGGCTTCGATCACAACAGCCACCACACAAGCGGCGGG
TTCGCCCACGGCATGCACCACGGCGGTCACCACGGGATCGGAGGTCCTGG
GTTCCATTCCCACACCCCGCACCACGTGTCCGCAGTCGGCGGCGGCACGA
GCTTCTACACCGGGCCGACGTTCGGAGCACAGAACCCCGGCGTGGCCGCG
GCCTGCCCGTTCATGTTCGCCTTCTTCTTCGTTGTGTCCGGGTTCATCAT
GACGGTGATGGGGTGGTCCACTGGGTTCGGGTTCAGCCCTATTCTGGTGA
TAGGACCGATGTTCCTGTGCCTCGGCATCGTGCTCTGTACCGTCGGATGC
GTCTGTTACAGGTGAGTACGGATAGCATTGTTTTCCCCAAATTATTCGCA
ACGAGGTATCAAAACAGGCAGTTCCGCTGCAGTACCGTAACAAGCCGCTA
GGGCGCCCCAAAGCCTAATCATTTTCAGGTCTCACACCAAGACAGATTGT
TTTCCCCAAACCATTCACAACGAGATATTTTAGCTTTGCGTTTTGTGTAC
GCCTTCATGTGTGTGTTTGACGTGCTCTGTGAAAGTTTGTATTTAACTTT
GAATACTGTTCCCAGGGCTAACCCTTTGTTATAGTCTTTGGCTAGTTGGG
TAGCCCTGGCTGTACTTTTTTACAGTCAAATAAATCAAATCAAATATTAA
AGCAGGCAGTTCCGCGGCAGTACTGCAGCAAGCCACTAGAAGGCCCAAAG
CCTATCATTTTCAGGTCTCACCAAGACCTACTCACATACCGTATATCAAG
GCAATCCATCCAGGCCTTTTTGTTCATCAACATCCGGACATGCGTACAAA
CGCTGCCGAAAACATAACCTTCTTGGCGAATGTAACAGGTCAATTTACCG
TTAATACAGGCCCCGCTAAATCTATCGTTGCCAGAATCCCCCATGTAGAC
CCTCTTACAGGTGCCGCCGCCAGGAGGCTGCCCGTCAGACTGGCCAGTCT
ACGGTCCAGGTGGTGACGTCATCAGGTGCCCCCCAGCCGGGCCCGGGAGG
ACAGACCATGATGATGCACCCGACCACCGTCATCGGTCAGGGCGGCCCGC
CGCAGGCCTACCCCGGGCCCACCTCTGCAGCGGGGGCGGTCCCTAACCCG
ACGGGCCCGCCGCAACCCTACCCCGGCTACCCCCCAACGTGAGTAACTGT
TGTTGGCATGTTTACCTTCATGGAAGTTTCTCCCTATTCTTCCTCGTCTC
CAAGCGACCTGGACTAGACCCTACCCCGCCTACCCTCCAACGTGAGTAGT
TGTTGTTGTCATGTTTACCTTCATGGAAGTTTCTTCCTCTTCTTCCTCGT
CTCCAAGCGACCTGGACTAGACCCTACCCCGCTTACCCTCCAACATGAGT
ACATGTTGTTGTCATGTTTACCTTCATGGAAGAAACATATTGTTTTTGCT
CCGTTACTTCATCTTCTTCCTCGTCTCCAAGCGACCTGGACTAGATGGCT
GTCACCCTGCTTAGAAAATTCAAAGGATCTCACATTGAAATACATTTGCT
TCAACGTTGCGTCATTGACATTGGTGTTTTTCTTGTTCTGTTCTATCACA
GCATGCCGGGAGGATACCCACCGGCGGGGCAGCCCCCCTACCCCCCAGCA
GCAACCGCCCCACCCACGGGGTACCCCCCTCCTGGCCAGCCGCCGTACCC
CCTTGCAGGCGCCCCACCACCCCCCACGGGCGGACTGCCACCACCCTCGG
GATACCCGCCCTATGGCGCCGCGCCACCCCCCGGGACGTCTGACGTCCCC
CCACCCCCCTCGTACCACGAAGTCACCAAGGGAGAGAAGAACTGATTAAC
ACACAGAGGAACTAGGTTTCCTGTGGTTTTGAAATGTGTGTTTAACTGAA
CGTTTGTGGGATTTTATATGCATGTGTTTTATATGGTTTAGTGTAGAAAA
TACTATGTACATGTGGATTATCTTTCTCTACAAGGATGGAAATTTTAAGT
AAATTTTTCATGCAAATTTCCTAAAACTGGAAGATTTTAGCATATTTTGT
CTATATTTTTCTGTAGAACAAAATATAACGTAAACAGCCATGGCGCTTTC
TCTACGTATACGCACAGCCATGAAATGGAAAAGACAAGAACAAGAAATTT
TGACATCAATTTTATAAAAGTGTAAAGGGCAAGTCAATTGATACATGCAT
TACAGTGCTTTTCAAATGTAGAATCATGTCAACTGTCATAGTTTTTGTTG
TAGCGGCGGAGTACGTATACTCAAGATTTTTTTTATTCTACATATATGCG
TATATTTTTCAATGATGATGATGATTTTATTCAGTAAGAAGCTCGCGGAT
TAAGTTACAACATAATCCGAATTCCGTTCTTAGTACAAAAGTGTTACAAT
CCTGTTACAATTCCAATAATCACAATGTCATTACATTTATAAAAACTTGC
ACAGTAAAATCCAAACTTTCTTAAATCGGGAAATATTTTATCCCCTGCAT
GTAAATGTTGTTTTATTTATTGTGCAATACGTCACAGGAAATGCCATATA
TGGCAGATGTAGTTGGAATCGTATGATTCCAGTTAAATAAAGAGAGCAGG
AGAGAGAAATGATGAGATTTGATTGGTCAGGTCGTTTTTAAAGCACGTAC
TATGTAATGGATAGGCTTGTTTTCCCTTACTGGCGGGGTTTAGTACCTGG
CCATGTTTGCGCTATTGGTGGCAAAAGCACTGTTGTATTTGTGCTTTTAT
CTATACCATTAAAATGGTGCTTAATTAACGTAGACAATATGGTGCTTAAC
GTAAAAGAAATGATGTAGACTTTCAGATATAATCAACCGTTTTTACACCG
TAGTTAACATTATTTGCTTTCCTGACGCCTGTATGAGCTGTTATCATCAG
CAAATAAACGCAACTAACCTTGCACGTATCGCATACTACGCGTGGTCTCT
TTTTTTAGAAACGCGACATACTTAATGTCATAATAGTTCTTCAGGAATGC
CACGAAAGGGTGCTCT Coding sequence (CDS) from alignment at Sc0000010:4742090..4745155+ >transcript:BL83713_cuf0 ID=transcript:BL83713_cuf0|Name=transcript:BL83713_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2646bp|location=Sequence derived from alignment at Sc0000010:4742090..4745155+ (Branchiostoma lanceolatum)
GGGTTCAGTAGTTGCGGGGACGGAGGCGGTTTCAGCTCGGACACGGGTGG
AGGTTTCGGCGGAGGCTTCGATCACAACAGCCACCACACAAGCGGCGGGT
TCGCCCACGGCATGCACCACGGCGGTCACCACGGGATCGGAGGTCCTGGG
TTCCATTCCCACACCCCGCACCACGTGTCCGCAGTCGGCGGCGGCACGAG
CTTCTACACCGGGCCGACGTTCGGAGCACAGAACCCCGGCGTGGCCGCGG
CCTGCCCGTTCATGTTCGCCTTCTTCTTCGTTGTGTCCGGGTTCATCATG
ACGGTGATGGGGTGGTCCACTGGGTTCGGGTTCAGCCCTATTCTGGTGAT
AGGACCGATGTTCCTGTGCCTCGGCATCGTGCTCTGTACCGTCGGATGCG
TCTGTTACAGGTGCCGCCGCCAGGAGGCTGCCCGTCAGACTGGCCAGTCT
ACGGTCCAGGTGGTGACGTCATCAGGTGCCCCCCAGCCGGGCCCGGGAGG
ACAGACCATGATGATGCACCCGACCACCGTCATCGGTCAGGGCGGCCCGC
CGCAGGCCTACCCCGGGCCCACCTCTGCAGCGGGGGCGGTCCCTAACCCG
ACGGGCCCGCCGCAACCCTACCCCGGCTACCCCCCAACCATGCCGGGAGG
ATACCCACCGGCGGGGCAGCCCCCCTACCCCCCAGCAGCAACCGCCCCAC
CCACGGGGTACCCCCCTCCTGGCCAGCCGCCGTACCCCCTTGCAGGCGCC
CCACCACCCCCCACGGGCGGACTGCCACCACCCTCGGGATACCCGCCCTA
TGGCGCCGCGCCACCCCCCGGGACGTCTGACGTCCCCCCACCCCCCTCGT
ACCACGAAGTCACCAAGGGAGAGAAGAACTGAGGGTTCAGTAGTTGCGGG
GACGGAGGCGGTTTCAGCTCGGACACGGGTGGAGGTTTCGGCGGAGGCTT
CGATCACAACAGCCACCACACAAGCGGCGGGTTCGCCCACGGCATGCACC
ACGGCGGTCACCACGGGATCGGAGGTCCTGGGTTCCATTCCCACACCCCG
CACCACGTGTCCGCAGTCGGCGGCGGCACGAGCTTCTACACCGGGCCGAC
GTTCGGAGCACAGAACCCCGGCGTGGCCGCGGCCTGCCCGTTCATGTTCG
CCTTCTTCTTCGTTGTGTCCGGGTTCATCATGACGGTGATGGGGTGGTCC
ACTGGGTTCGGGTTCAGCCCTATTCTGGTGATAGGACCGATGTTCCTGTG
CCTCGGCATCGTGCTCTGTACCGTCGGATGCGTCTGTTACAGGTGCCGCC
GCCAGGAGGCTGCCCGTCAGACTGGCCAGTCTACGGTCCAGGTGGTGACG
TCATCAGGTGCCCCCCAGCCGGGCCCGGGAGGACAGACCATGATGATGCA
CCCGACCACCGTCATCGGTCAGGGCGGCCCGCCGCAGGCCTACCCCGGGC
CCACCTCTGCAGCGGGGGCGGTCCCTAACCCGACGGGCCCGCCGCAACCC
TACCCCGGCTACCCCCCAACCATGCCGGGAGGATACCCACCGGCGGGGCA
GCCCCCCTACCCCCCAGCAGCAACCGCCCCACCCACGGGGTACCCCCCTC
CTGGCCAGCCGCCGTACCCCCTTGCAGGCGCCCCACCACCCCCCACGGGC
GGACTGCCACCACCCTCGGGATACCCGCCCTATGGCGCCGCGCCACCCCC
CGGGACGTCTGACGTCCCCCCACCCCCCTCGTACCACGAAGTCACCAAGG
GAGAGAAGAACTGAGGGTTCAGTAGTTGCGGGGACGGAGGCGGTTTCAGC
TCGGACACGGGTGGAGGTTTCGGCGGAGGCTTCGATCACAACAGCCACCA
CACAAGCGGCGGGTTCGCCCACGGCATGCACCACGGCGGTCACCACGGGA
TCGGAGGTCCTGGGTTCCATTCCCACACCCCGCACCACGTGTCCGCAGTC
GGCGGCGGCACGAGCTTCTACACCGGGCCGACGTTCGGAGCACAGAACCC
CGGCGTGGCCGCGGCCTGCCCGTTCATGTTCGCCTTCTTCTTCGTTGTGT
CCGGGTTCATCATGACGGTGATGGGGTGGTCCACTGGGTTCGGGTTCAGC
CCTATTCTGGTGATAGGACCGATGTTCCTGTGCCTCGGCATCGTGCTCTG
TACCGTCGGATGCGTCTGTTACAGGTGCCGCCGCCAGGAGGCTGCCCGTC
AGACTGGCCAGTCTACGGTCCAGGTGGTGACGTCATCAGGTGCCCCCCAG
CCGGGCCCGGGAGGACAGACCATGATGATGCACCCGACCACCGTCATCGG
TCAGGGCGGCCCGCCGCAGGCCTACCCCGGGCCCACCTCTGCAGCGGGGG
CGGTCCCTAACCCGACGGGCCCGCCGCAACCCTACCCCGGCTACCCCCCA
ACCATGCCGGGAGGATACCCACCGGCGGGGCAGCCCCCCTACCCCCCAGC
AGCAACCGCCCCACCCACGGGGTACCCCCCTCCTGGCCAGCCGCCGTACC
CCCTTGCAGGCGCCCCACCACCCCCCACGGGCGGACTGCCACCACCCTCG
GGATACCCGCCCTATGGCGCCGCGCCACCCCCCGGGACGTCTGACGTCCC
CCCACCCCCCTCGTACCACGAAGTCACCAAGGGAGAGAAGAACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000010 | genome | Sc0000010:4742090..4745155 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83713_cuf0 |
| Biotype | protein_coding |
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