|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83526_cuf0 >transcript:BL83526_cuf0-protein ID=transcript:BL83526_cuf0-protein|Name=transcript:BL83526_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=575bp
DKMAAAPSSLGEQIREELSCSICLELFTKPKMLPCQHTFCQGCLVDHVGN
SKKVWVFKCPNCRRQVRVPPKGIAGLPDNYLVTSLCERLKGVTTQPETGP
TARDLIAEGKNILGSYHSFIRTLGETGNTLNTQKQLTRNRIIQAYNQLDD
DLRQRKSFLLAEVGQNDKKNLERINSERNRVLEDIKELSAVCEQAEKELE
QGGDAQQSILTEVVEKHRKKSSEPTPVQMQRPIFQPTDILMPLLGRVTVQ
PLPSAIAPEAVVNQHTSPVPTITYRSNEVNCTPGRHVGGNHRQGENESQT
FGGEGKEQGKFRDPCGVAVSDDGCIFVADYCNQRIQVFTVEQIFMHKFPT
IVSDKEKMFPGDVATDGVGNLWVVGRTGSAEFAVLYSKQGKMINKINLQY
TLQGRGVAVDTRKNRILITETTGSPSKPYGLVLVFKADGTFVKTVGEKQG
GTNKYLRYIDVDTQGNILVSDWANNCIYSFSEDGRLLLRSGVSCKARGDG
ELKLPCGICADSADNIIVANREHNRLELFDKTGRFLRHIATDIVSPQAVA
VTTHGQLVVISTGCTVTILNRYFYT Run BLAST on NCBI mRNA from alignment at Sc0000099:709610..711503- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83526_cuf0 ID=transcript:BL83526_cuf0|Name=transcript:BL83526_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1894bp|location=Sequence derived from alignment at Sc0000099:709610..711503- (Branchiostoma lanceolatum)
GGACAAAATGGCAGCTGCACCATCAAGCTTAGGGGAGCAAATTCGTGAAG
AACTGTCCTGCAGCATCTGCCTGGAGCTGTTCACCAAGCCCAAGATGCTG
CCCTGTCAGCACACTTTCTGTCAGGGCTGTCTAGTGGACCATGTAGGGAA
TTCTAAGAAAGTGTGGGTGTTTAAGTGCCCAAACTGCCGTCGGCAGGTCA
GGGTGCCGCCCAAGGGGATAGCAGGTTTACCAGACAACTACTTGGTTACG
AGTCTGTGTGAAAGGCTTAAAGGGGTGACTACACAGCCTGAAACAGGGCC
CACAGCTCGGGACTTGATCGCTGAGGGGAAAAACATCCTGGGCAGTTATC
ACAGCTTCATCAGAACTTTGGGAGAGACCGGGAACACCCTGAATACACAG
AAACAGCTGACAAGGAACAGAATTATTCAGGCCTATAACCAACTGGATGA
CGACCTCAGACAACGAAAAAGCTTCCTCTTGGCTGAAGTCGGACAAAACG
ACAAGAAAAACTTGGAACGAATAAACAGTGAGAGGAACAGGGTGCTGGAG
GATATCAAAGAACTGTCTGCTGTCTGTGAGCAAGCAGAAAAAGAATTGGA
GCAGGGCGGGGATGCTCAGCAAAGCATTTTGACAGAGGTGGTAGAAAAGC
ACAGAAAGAAATCATCAGAGCCAACGCCTGTACAAATGCAGCGCCCTATC
TTTCAACCCACAGACATCCTAATGCCATTGTTGGGGCGTGTGACGGTCCA
GCCTCTCCCATCTGCAATAGCCCCAGAAGCTGTCGTCAATCAACACACAT
CACCAGTGCCTACCATTACATATAGAAGCAATGAGGTAAATTGCACACCA
GGTCGTCACGTTGGTGGGAATCATAGGCAAGGGGAGAATGAGTCTCAGAC
CTTTGGTGGAGAGGGAAAAGAACAGGGGAAGTTTAGGGATCCCTGTGGTG
TTGCAGTGTCAGATGATGGGTGTATTTTTGTAGCAGACTACTGCAACCAG
AGAATCCAAGTCTTCACAGTAGAGCAAATATTCATGCACAAGTTCCCAAC
AATCGTGTCAGACAAAGAGAAGATGTTCCCTGGCGATGTGGCCACGGATG
GGGTGGGGAACCTGTGGGTGGTGGGGAGGACAGGCTCTGCCGAGTTTGCC
GTGCTGTACTCCAAACAGGGCAAGATGATCAACAAGATTAACCTACAGTA
CACCTTGCAGGGCAGAGGAGTTGCCGTGGACACCAGGAAGAACCGCATCC
TCATTACAGAAACCACGGGAAGCCCGTCCAAGCCTTACGGGCTAGTGTTG
GTCTTCAAGGCAGATGGGACCTTTGTGAAAACTGTGGGTGAAAAGCAGGG
AGGAACAAACAAATACCTGCGGTACATCGACGTGGACACGCAAGGGAACA
TTCTCGTGTCCGACTGGGCCAATAACTGCATCTACTCATTCAGCGAGGAC
GGACGGTTGCTGCTGCGGTCTGGAGTGTCGTGCAAGGCAAGGGGTGATGG
CGAGCTGAAGCTTCCCTGTGGCATCTGTGCAGACAGCGCGGATAACATCA
TTGTGGCAAACAGAGAACATAACCGTTTGGAGCTGTTTGACAAGACAGGC
AGATTCCTACGGCACATCGCTACAGACATCGTGTCGCCACAGGCTGTTGC
CGTGACAACACATGGACAGTTGGTGGTGATCTCTACAGGTTGCACAGTCA
CCATACTTAACCGGTACTTCTACACCTGAATCGGACTAAAAGTTTATCAT
TAAACTTATCTGTTTGATACTAGAGTGTTGGCCTTGTATCCGGTGGGTCG
TGAGTTCAAATACTTAAAAGATATGGATATCATCTGGAAAAGTTTTCTAA
TACGCAAAAAGATTAGATCATGATTGAATTTGCTGAGATGACGG Coding sequence (CDS) from alignment at Sc0000099:709610..711503- >transcript:BL83526_cuf0 ID=transcript:BL83526_cuf0|Name=transcript:BL83526_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1728bp|location=Sequence derived from alignment at Sc0000099:709610..711503- (Branchiostoma lanceolatum)
GACAAAATGGCAGCTGCACCATCAAGCTTAGGGGAGCAAATTCGTGAAGA
ACTGTCCTGCAGCATCTGCCTGGAGCTGTTCACCAAGCCCAAGATGCTGC
CCTGTCAGCACACTTTCTGTCAGGGCTGTCTAGTGGACCATGTAGGGAAT
TCTAAGAAAGTGTGGGTGTTTAAGTGCCCAAACTGCCGTCGGCAGGTCAG
GGTGCCGCCCAAGGGGATAGCAGGTTTACCAGACAACTACTTGGTTACGA
GTCTGTGTGAAAGGCTTAAAGGGGTGACTACACAGCCTGAAACAGGGCCC
ACAGCTCGGGACTTGATCGCTGAGGGGAAAAACATCCTGGGCAGTTATCA
CAGCTTCATCAGAACTTTGGGAGAGACCGGGAACACCCTGAATACACAGA
AACAGCTGACAAGGAACAGAATTATTCAGGCCTATAACCAACTGGATGAC
GACCTCAGACAACGAAAAAGCTTCCTCTTGGCTGAAGTCGGACAAAACGA
CAAGAAAAACTTGGAACGAATAAACAGTGAGAGGAACAGGGTGCTGGAGG
ATATCAAAGAACTGTCTGCTGTCTGTGAGCAAGCAGAAAAAGAATTGGAG
CAGGGCGGGGATGCTCAGCAAAGCATTTTGACAGAGGTGGTAGAAAAGCA
CAGAAAGAAATCATCAGAGCCAACGCCTGTACAAATGCAGCGCCCTATCT
TTCAACCCACAGACATCCTAATGCCATTGTTGGGGCGTGTGACGGTCCAG
CCTCTCCCATCTGCAATAGCCCCAGAAGCTGTCGTCAATCAACACACATC
ACCAGTGCCTACCATTACATATAGAAGCAATGAGGTAAATTGCACACCAG
GTCGTCACGTTGGTGGGAATCATAGGCAAGGGGAGAATGAGTCTCAGACC
TTTGGTGGAGAGGGAAAAGAACAGGGGAAGTTTAGGGATCCCTGTGGTGT
TGCAGTGTCAGATGATGGGTGTATTTTTGTAGCAGACTACTGCAACCAGA
GAATCCAAGTCTTCACAGTAGAGCAAATATTCATGCACAAGTTCCCAACA
ATCGTGTCAGACAAAGAGAAGATGTTCCCTGGCGATGTGGCCACGGATGG
GGTGGGGAACCTGTGGGTGGTGGGGAGGACAGGCTCTGCCGAGTTTGCCG
TGCTGTACTCCAAACAGGGCAAGATGATCAACAAGATTAACCTACAGTAC
ACCTTGCAGGGCAGAGGAGTTGCCGTGGACACCAGGAAGAACCGCATCCT
CATTACAGAAACCACGGGAAGCCCGTCCAAGCCTTACGGGCTAGTGTTGG
TCTTCAAGGCAGATGGGACCTTTGTGAAAACTGTGGGTGAAAAGCAGGGA
GGAACAAACAAATACCTGCGGTACATCGACGTGGACACGCAAGGGAACAT
TCTCGTGTCCGACTGGGCCAATAACTGCATCTACTCATTCAGCGAGGACG
GACGGTTGCTGCTGCGGTCTGGAGTGTCGTGCAAGGCAAGGGGTGATGGC
GAGCTGAAGCTTCCCTGTGGCATCTGTGCAGACAGCGCGGATAACATCAT
TGTGGCAAACAGAGAACATAACCGTTTGGAGCTGTTTGACAAGACAGGCA
GATTCCTACGGCACATCGCTACAGACATCGTGTCGCCACAGGCTGTTGCC
GTGACAACACATGGACAGTTGGTGGTGATCTCTACAGGTTGCACAGTCAC
CATACTTAACCGGTACTTCTACACCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000099 | genome | Sc0000099:709610..711503 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83526_cuf0 |
| Biotype | protein_coding |
|
