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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL83073_cuf1 >transcript:BL83073_cuf1-protein ID=transcript:BL83073_cuf1-protein|Name=transcript:BL83073_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=154bp
MLFVCFQQKRYDQVNPFSWHDNRNSFQDHGEYFGHGLGKQSVVPVEKSLH
YSNNYIRWTTREGSHTDNRSSYAVSFRGDRDTESPTKRRFPRTYSEPRQG
RIQLDTGTTDWSNESHRTPLQVMASAQEPFLPHNPWRYSYKAHEQGRNPL
CMQN Run BLAST on NCBI mRNA from alignment at Sc0000470:154224..156805- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL83073_cuf1 ID=transcript:BL83073_cuf1|Name=transcript:BL83073_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2582bp|location=Sequence derived from alignment at Sc0000470:154224..156805- (Branchiostoma lanceolatum)
CACATAACAAACCTGTGTTTTGGCGATGCATGGCCGCAAAGGTTTTTTCT
CTCCAGAGAGAATACAGCGTATTTGGTACGGCCTAATTGCAGGAAAGCAG
ACACCTGGTGTTGGTTCTGAAGCACAATGGCAGAGATGACACGTTATATC
CCAGCCTGTCAGATAGAGAGTGCACTGAGGTGTTCCCTCCTGAAAATTGT
CATACTATCCTCTAATTTTGTACGCTTCACATAGCTTCTACGGTAAACAT
GTCTGCCTCAATAGTGCATGATCAGAGAGAGACTAATTTGCCCATTGGTA
GTGTGGGAATACTGAGCAAAATTTTTGTCAATTTAATTTATCTTTATCTC
ATTACATATATTTAATCATCATAGAACAGCTAAGAGAGAAAAAAAGTGAG
GTATGGCAGGATGTGGCAGTTCCAAAAAACAGAAAAAAAACATTGCTAAA
GTGACACTGTCCCCCACGTTCCAAATGCTCGGATTTCAGTTTGTTTGTCC
AGCTTTCCTGGCAAGTAGGACAGATCATTAGCCTTTTGTGAACACAAAAG
GCCAGGCTGTTTGTTGGTTTAAAATAATCTCTAATTTCAGGTGTTTTTAG
ACAGTGCAACTAATTTTTCCCCAAGAAACGATAACATAGTTGGTAGAGTC
TCATATGAGAGAGTTACAATCATCTTTATACAAGTATAAAGCCTGATAGT
ACGAATCATATAGACAACATTACTGGGACACGGCCAAAACAACTTGTTGA
TTGAAAAGCAAATGCTCTTCCATAATGCTTCTGTTATGCCTGTCATGTTT
TCTGCAGCATATTATGGACGGTTCACACAAAGCACTTGCAGACAGCTCTA
AAATGTTATGAAGATAACCACTAATAATTTTGCTTGTTATGTTCCAAGAC
ACATGTAATGATCACAAAAGGCTTTTACGCTGACACCACCCCCAAAAAAT
CACTTGTTTATATGGAGATTTGATTATTTACATATCATTGGATTGCATTA
CAGTTTGAATGGAACAAAGTTTACGTAATACTAATGCAACATAAACCTCA
ACATTAACCTTTGATCTTAGGCTTTCACAACACACATATTCCATTTACAA
TATGGAGGTTCATATTTCATGCTGTTTGTTTGTTTTCAACAGAAGCGGTA
TGACCAAGTCAACCCCTTCTCCTGGCACGACAACAGGAATTCCTTCCAGG
ACCATGGGGAGTACTTTGGACATGTAAGCCAGTTTACAATGCTAAGATTA
TCAATTAAAGAGGTGTACTGACAAAACTAGCGGGTATTTCTACTGGTCAT
TTGATGAAGAAAATCTCATGCCACTGTATGTAGAGCTGGCCACCCAGAAA
AAGAATGGTGACAATACACCAAAAATAGTTACTCAAGCAACTGGATAAAA
TTTTGAAATGGTGAATTTTGAATGGTGACACTATTGTGAAACTGGCAAAT
CAGATATTAAAAAAGAAAAAAAATTTGAGAAGTTTTTTATCAATTTTTTT
TTTCCTTTAGGGTCTTGGAAAACAATCAGTGGTTCCTGTTGAGAAGAGTC
TTCACTACTCCAATAACTACATCCGTTGGACCACACGCGAGGGAAGCCAC
ACCGACAACAGGAGCAGCTACGCCGTGTCCTTCCGAGGAGACCGTGACAC
TGAGTCCCCCACGAAACGTCGCTTTCCTCGCACGTACAGTGAGCCGCGGC
AGGGCAGGATACAACTGGACACGGGCACTACAGACTGGAGTAACGAAAGC
CACAGGACCCCTCTACAGGTCATGGCATCTGCACAAGAACCCTTCCTACC
CCACAACCCATGGAGATACTCATACAAGGCACATGAACAGGGCAGAAATC
CCCTGTGTATGCAGAACTAAATTCAAACATCCAGACTCGTATATAAGTGA
TTGTAGAAGTATACAGTTTTCAGTCAACATATCTTCTTTTGCTAATATGT
GAAGAATTTTACTCAACTACAGAGATAGATGTTTCCTTAAGTTACAATGA
TGAACTCTGAGGCTGAATTTTGAAAATGTTCCTAACATATCAAATCTTTG
AAAGGTGACAATTTATAAACAGCAGCAAACAGAATTAGATTTAGTTCATG
GTAGAACAACACAAAGCTACATTTAGTTACTATTCATAAAATCTACTATT
TCAACTGATTGCTTTTATTGTACTGTTGATCAGAAAGTACATTCTAGCAA
ATGGAGACAACTATCATAGCTTCTATGCATTTTAACTATAAAACTCACTG
TATTGTATATATCTAACATCTTAATTTATGTATTATGTATATAAAACTGC
AGGATGTCTTAATGCAAATCAAGATATCATCTTGTGTATATTACTGTGCT
TGAAAAGAAATAAATGCATCACATTTGTCACAATAGGCTTGTGCAGTAGC
CTTTTTGCTGATTACAGACAGTAACTGTTTTTCTGATAAGTGCATAACCA
CATTCTGATGGGTCCTTTTTTTTCAACAACAGAGGTAAAAAAAGTCACTG
CATTGATAAAGTTTATATAATTGTAAATACATCTGACCAAACTGCCAAAA
TGCAACATTTGCCATGTGACTTTTAAGTGTCC Coding sequence (CDS) from alignment at Sc0000470:154224..156805- >transcript:BL83073_cuf1 ID=transcript:BL83073_cuf1|Name=transcript:BL83073_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=930bp|location=Sequence derived from alignment at Sc0000470:154224..156805- (Branchiostoma lanceolatum)
ATGCTGTTTGTTTGTTTTCAACAGAAGCGGTATGACCAAGTCAACCCCTT
CTCCTGGCACGACAACAGGAATTCCTTCCAGGACCATGGGGAGTACTTTG
GACATGGTCTTGGAAAACAATCAGTGGTTCCTGTTGAGAAGAGTCTTCAC
TACTCCAATAACTACATCCGTTGGACCACACGCGAGGGAAGCCACACCGA
CAACAGGAGCAGCTACGCCGTGTCCTTCCGAGGAGACCGTGACACTGAGT
CCCCCACGAAACGTCGCTTTCCTCGCACGTACAGTGAGCCGCGGCAGGGC
AGGATACAACTGGACACGGGCACTACAGACTGGAGTAACGAAAGCCACAG
GACCCCTCTACAGGTCATGGCATCTGCACAAGAACCCTTCCTACCCCACA
ACCCATGGAGATACTCATACAAGGCACATGAACAGGGCAGAAATCCCCTG
TGTATGCAGAACTAAATGCTGTTTGTTTGTTTTCAACAGAAGCGGTATGA
CCAAGTCAACCCCTTCTCCTGGCACGACAACAGGAATTCCTTCCAGGACC
ATGGGGAGTACTTTGGACATGGTCTTGGAAAACAATCAGTGGTTCCTGTT
GAGAAGAGTCTTCACTACTCCAATAACTACATCCGTTGGACCACACGCGA
GGGAAGCCACACCGACAACAGGAGCAGCTACGCCGTGTCCTTCCGAGGAG
ACCGTGACACTGAGTCCCCCACGAAACGTCGCTTTCCTCGCACGTACAGT
GAGCCGCGGCAGGGCAGGATACAACTGGACACGGGCACTACAGACTGGAG
TAACGAAAGCCACAGGACCCCTCTACAGGTCATGGCATCTGCACAAGAAC
CCTTCCTACCCCACAACCCATGGAGATACTCATACAAGGCACATGAACAG
GGCAGAAATCCCCTGTGTATGCAGAACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000470 | genome | Sc0000470:154224..156805 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL83073_cuf1 |
| Biotype | protein_coding |
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