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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82961_cuf0 >transcript:BL82961_cuf0-protein ID=transcript:BL82961_cuf0-protein|Name=transcript:BL82961_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=114bp
MQTAFCNGYCQRSVIICEFRNVLAELESFLRASXSVMICEFRNVLAELES
FLRASCIYLCWKYSSTHHQSCPPHNHSVSCAFNLAGACKWCFFTSPCASF
LVIRPLFYQDVDRN Run BLAST on NCBI mRNA from alignment at xpSc0039686:77172..78210+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82961_cuf0 ID=transcript:BL82961_cuf0|Name=transcript:BL82961_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1039bp|location=Sequence derived from alignment at xpSc0039686:77172..78210+ (Branchiostoma lanceolatum)
GGCAGAATGATGTCTTACTGCGATAGAAAATAGGCCCTGGCATAATCAAG
GTCATTGTAAGCTAAGCCAAGATTTTGGATCTGGTGACTTACACGTAAAT
ATATCGCGTCTATTTCTATGTGCTAACGTCCAAATTTTGTTTTTTTATTT
TGACAAAAAGAGCCAAAACGATTCTATGCGGATGAATACAACAAGGACGC
TTCGGCAGCATGGGAATTTACGCCAGTGTTGCTTTTACATTGTGGCGTGG
GGTTGTAGAGCAAGCTTGGCCTTTCGTCCGTCTCTTTTAGCATTATATAC
TAAGCTTGTGCCATGCAAACTGCTTTCTGTAACGGTTATTGTCAAAGGTC
AGTTATAATTTGTGAGTTTAGAAATGTCCTTGCTGAGTTAGAATCCTTTT
TGAGGGCCTCTTGNTCAGTTATGATTTGTGAGTTTAGAAATGTCCTTGCT
GAGTTAGAATCCTTTTTGAGGGCCTCTTGCATTTACCTTTGTTGGAAATA
CAGCTCGACTCATCATCAGTCATGCCCACCCCACAACCACTCAGTGAGCT
GTGCCTTTAATCTTGCCGGAGCATGTAAATGGTGTTTTTTCACCTCCCCT
TGTGCTTCTTTCTTAGTTATACGTCCACTATTTTATCAAGATGTTGATAG
GAACTAATACAACTTTGGTCCTAAGAGTGAGTTTGCCTGGTATTGTGGCG
AAACAAGAAATGCTACTTGGGCTTTTTCTTGACTACATGCATGCCATGGG
AGCAGAAAGTCTTCTTCTTGTCGCAAATGTGTTGGCGCATTTTTATTTCT
TAAACAAGCTTATGGGGTTTGTGGATACTTACCTGGCAGAGATGGCCCAT
TAGTTACACATATATTTTACTAAAAAAATAAATGTGCTTCTTGTGCCCGT
GAATAGGCTTGTTTAGTTGTCTGTGATTAAGGTTTTGACTGTATGCGATA
TTGCTGTTTTGTTGTCTATAAGCTAGTTCGGAGTTGTTACTACGCATGTG
CAGTGTCAAAGGTGAAGGCCCCCGGCTCGTATACAGTGC Coding sequence (CDS) from alignment at xpSc0039686:77172..78210+ >transcript:BL82961_cuf0 ID=transcript:BL82961_cuf0|Name=transcript:BL82961_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=345bp|location=Sequence derived from alignment at xpSc0039686:77172..78210+ (Branchiostoma lanceolatum)
ATGCAAACTGCTTTCTGTAACGGTTATTGTCAAAGGTCAGTTATAATTTG
TGAGTTTAGAAATGTCCTTGCTGAGTTAGAATCCTTTTTGAGGGCCTCTT
GNTCAGTTATGATTTGTGAGTTTAGAAATGTCCTTGCTGAGTTAGAATCC
TTTTTGAGGGCCTCTTGCATTTACCTTTGTTGGAAATACAGCTCGACTCA
TCATCAGTCATGCCCACCCCACAACCACTCAGTGAGCTGTGCCTTTAATC
TTGCCGGAGCATGTAAATGGTGTTTTTTCACCTCCCCTTGTGCTTCTTTC
TTAGTTATACGTCCACTATTTTATCAAGATGTTGATAGGAACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039686 | genome | xpSc0039686:77172..78210 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82961_cuf0 |
| Biotype | protein_coding |
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