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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82236_cuf0 >transcript:BL82236_cuf0-protein ID=transcript:BL82236_cuf0-protein|Name=transcript:BL82236_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=161bp
QMDDDEMLEEPAPAGRIRNVRRIEARRLLLLDAGTTVVPRNQARLNLEAQ
PGRLATILLKQAHTANEVVRLVHNGFLAAGRSLRVGEWEFVSIADRNFLI
PFQGRGTGKRLLDQCRPEGTIYIRKKNVPTVQVQPPAAPAAQVRTSTRRR
QVAAQEQVRLR Run BLAST on NCBI mRNA from alignment at xfSc0003211:492..1344- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82236_cuf0 ID=transcript:BL82236_cuf0|Name=transcript:BL82236_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=853bp|location=Sequence derived from alignment at xfSc0003211:492..1344- (Branchiostoma lanceolatum)
TACAGATGGATGACGACGAGATGCTGGAAGAGCCAGCGCCTGCAGGAAGA
ATACGAAATGTGCGAAGGATAGAGGCCAGGAGGCTCTTATTGCTAGATGC
TGGCACAACAGTGGTGCCTAGAAACCAGGCAAGGCTGAACTTAGAGGCAC
AGCCTGGAAGATTGGCTACCATTTTGCTTAAACAGGCTCACACAGCTAAT
GAAGTGGTGCGGTTAGTGCACAATGGATTTTTGGCGGCTGGACGGTCTCT
GAGGTATGAAGTAACAAGTGATTTTACATTGGGTGAACAAAAATATGTGT
TTAGATAAACTCATAATCAAGTTGTTCTGGGAGAAATTTCTTGAAACTGT
TGGTTTATACCTCAGTAATATGGTGTTGAACTACTTAAGTTAAAGTTTAA
GGCAAGTAATAATTGGTAGGTACACAAGAATCGTTAACAATGACATACAA
TGTACATGTATACAATGTTGGTTACCAAGAGGTATGATCTTAACTTATGT
CAGTGTATTGTTAATGTTGTTTAGTTTTGATTATGTTTCTACATATGCAA
ATGAACAATCAATAAACAATTCTAAATTGCACTCTCAACTTCTCAGGGTT
GGTGAATGGGAGTTCGTCTCTATTGCAGACAGGAACTTCTTGATACCATT
TCAAGGGAGGGGAACTGGCAAGAGATTACTGGACCAATGCCGCCCAGAGG
GGACTATCTATATCAGAAAGAAGAATGTGCCAACGGTACAAGTGCAACCC
CCTGCAGCACCCGCAGCACAAGTGCGAACATCCACAAGGAGACGCCAAGT
AGCAGCACAAGAGCAGGTGAGATTAAGATAGATAAATATACCCAAGTTAT
TCT Coding sequence (CDS) from alignment at xfSc0003211:492..1344- >transcript:BL82236_cuf0 ID=transcript:BL82236_cuf0|Name=transcript:BL82236_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=972bp|location=Sequence derived from alignment at xfSc0003211:492..1344- (Branchiostoma lanceolatum)
CAGATGGATGACGACGAGATGCTGGAAGAGCCAGCGCCTGCAGGAAGAAT
ACGAAATGTGCGAAGGATAGAGGCCAGGAGGCTCTTATTGCTAGATGCTG
GCACAACAGTGGTGCCTAGAAACCAGGCAAGGCTGAACTTAGAGGCACAG
CCTGGAAGATTGGCTACCATTTTGCTTAAACAGGCTCACACAGCTAATGA
AGTGGTGCGGTTAGTGCACAATGGATTTTTGGCGGCTGGACGGTCTCTGA
GGGTTGGTGAATGGGAGTTCGTCTCTATTGCAGACAGGAACTTCTTGATA
CCATTTCAAGGGAGGGGAACTGGCAAGAGATTACTGGACCAATGCCGCCC
AGAGGGGACTATCTATATCAGAAAGAAGAATGTGCCAACGGTACAAGTGC
AACCCCCTGCAGCACCCGCAGCACAAGTGCGAACATCCACAAGGAGACGC
CAAGTAGCAGCACAAGAGCAGGTGAGATTAAGATAGCAGATGGATGACGA
CGAGATGCTGGAAGAGCCAGCGCCTGCAGGAAGAATACGAAATGTGCGAA
GGATAGAGGCCAGGAGGCTCTTATTGCTAGATGCTGGCACAACAGTGGTG
CCTAGAAACCAGGCAAGGCTGAACTTAGAGGCACAGCCTGGAAGATTGGC
TACCATTTTGCTTAAACAGGCTCACACAGCTAATGAAGTGGTGCGGTTAG
TGCACAATGGATTTTTGGCGGCTGGACGGTCTCTGAGGGTTGGTGAATGG
GAGTTCGTCTCTATTGCAGACAGGAACTTCTTGATACCATTTCAAGGGAG
GGGAACTGGCAAGAGATTACTGGACCAATGCCGCCCAGAGGGGACTATCT
ATATCAGAAAGAAGAATGTGCCAACGGTACAAGTGCAACCCCCTGCAGCA
CCCGCAGCACAAGTGCGAACATCCACAAGGAGACGCCAAGTAGCAGCACA
AGAGCAGGTGAGATTAAGATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0003211 | genome | xfSc0003211:492..1344 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82236_cuf0 |
| Biotype | protein_coding |
|
