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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82014_cuf1 >transcript:BL82014_cuf1-protein ID=transcript:BL82014_cuf1-protein|Name=transcript:BL82014_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=316bp
MWSPTGQPNGEEIREDWPFDARRREQERYGNCATTTWTTDPGLKLTPDMW
SPLVSSTTSGGYENAQGHSWDGSNQKDKPKTNHQCLQHQGRGLVWPCYLC
GSELSSVSILDKHISSHGFQGKRNSTTQQVVIGPDSSSVPTPVQTHPIER
IFPCSFCEKNFTNKAYMKMHMRVHTGDKPYKCKMCDKAFSQHGTLKNHIR
THTGEKPFVCEFCGMRFTSKGNMITHTRIHTADKPYDCQACNKKFSQLGS
LKVHMRKHTGERPFTCQVCGMKCITKGNLKTHLYTHTGEKPHSCGMCNKK
FSQKGSLKTHMKIHNP Run BLAST on NCBI mRNA from alignment at Sc0000000:4151282..4153528- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82014_cuf1 ID=transcript:BL82014_cuf1|Name=transcript:BL82014_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2247bp|location=Sequence derived from alignment at Sc0000000:4151282..4153528- (Branchiostoma lanceolatum)
CATGTCAGGTCATGATGGTCTGGTATATTTATATGTACAGAAACGTTATA
TTATGATGACCGTGGGAAACTCCAATACATAAAACCGCTACAGGTATGAG
CACCGATACTCTGTTAAGCACTTAGCACTTAAAGACGGTTCGTTTCTAAG
ATAGTACGTTCGTTTTTGTATGTTTTGTGTTCGTTATTGTGTTGGGGGAG
GGGCATCTTACAGTCCAAAGGAAATATATGGTGTTGCCAAAATTGTAATG
AGTAGCTGTATTATTAGTTTGGAAAAAAATATATATTATGTTTTTATTTG
CCCTATGAATAGAGTTTTATGATCTTATGATGTCAGTTAAGGAGCAGTCA
AACCTGTTCAAGTGACCACCTCTACATAAGATTACCCACCTGGCCATTGA
CACACGTTAAGAATCTTGTCTACAGTGACCACCTGTCCACATAGGCCACA
TTTTATCGGTCGCCTGAGGGGTCTTCCTGGGCACTTTTGTATCTTCATCA
TTTAGCCTCCAGGATATGATAATCATTTATCATATTCCAATTATACTGTA
TCATAACTGAACATAAGCAACAAAAAAAACAAATTTTTTACGATTCCCAG
TGTTCTAATAAGAATATATTTCTCTGTTGTATAGATGACAAGTGAGGAAG
TCAGATTGGCGATACTTGACTACATGTAATGAACGGATCGTAGCGGATAT
AACCATCCACCAGACATGTGGTCTCCTACTGGACAACCCAATGGTGAAGA
AATAAGAGAAGACTGGCCTTTTGATGCAAGAAGAAGAGAACAAGAAAGAT
ATGGAAACTGTGCAACAACAACTTGGACCACAGATCCAGGACTAAAACTC
ACACCTGACATGTGGAGTCCGCTGGTGAGCAGTACAACAAGTGGTGGATA
TGAAAACGCACAAGGACATAGCTGGGATGGAAGCAATCAGAAAGACAAGC
CAAAAACAAACCATCAGTGCTTGCAACATCAAGGCAGAGGTCTGGTTTGG
CCGTGCTACCTTTGTGGCTCAGAGTTAAGTTCAGTGTCAATTTTAGACAA
ACATATCAGTTCCCATGGATTCCAAGGAAAGCGTAACTCCACGACCCAGC
AAGTAGTCATAGGACCTGATTCGTCGAGCGTACCAACTCCTGTACAAACT
CACCCCATAGAACGTATTTTCCCCTGCAGTTTTTGTGAGAAGAACTTCAC
CAATAAGGCATATATGAAGATGCACATGCGTGTACATACCGGTGATAAAC
CGTACAAATGTAAGATGTGTGACAAGGCTTTTAGTCAGCATGGTACCCTG
AAGAACCACATCCGCACACACACTGGCGAGAAACCTTTCGTCTGCGAGTT
TTGTGGCATGCGTTTTACAAGCAAAGGCAATATGATAACACATACACGCA
TTCATACAGCGGATAAGCCTTATGACTGCCAAGCATGCAATAAGAAGTTC
AGTCAACTTGGTAGCTTAAAAGTCCACATGCGTAAACACACCGGTGAGAG
ACCATTCACGTGCCAGGTGTGTGGTATGAAGTGCATCACTAAGGGTAACC
TTAAGACTCACCTGTATACTCACACTGGTGAGAAACCACACAGTTGTGGC
ATGTGTAACAAGAAATTTAGCCAGAAGGGAAGTCTGAAGACGCACATGAA
AATTCATAATCCTTGACAATGAAAAATGTCTTATCAGTTTTAAATTTCAT
CTAATATGGTAGAAATCATTCTCGAGCAAAGTTGAATTGTGATTTCCAGT
GCAAATATTCGGGATGAGCAATCCATTGATTTTGTGACGTCACAATATGC
CGATATAACATGTGACTCAGTGAGCAGTGTATCACAGACGGGGGGGCGCT
ATAAACTTATATCACATATATGATCCACTGCTCATCAAGTCAAGTGCAAT
AAAGATGCAATGTTCAATCCAACTCTAACAGTAGGATTTGTGTTAAAAGA
ATAGAAAAACTGAATGTGAAGATAAATCTTTATTTCAATTCACACAATAT
ATTCAACATAAATATCAACCAGAACTATTTTTGTGCATTTTCAAAGTGCA
ATGATTTAGAAGTAATGGTACATGTATATAAATAACTAGATCAAATACAT
GTCTTTAGGCATTCAACATTTCTTTTTGTATTCAACAATAACATTTTTTT
TCAATTAACATGCAAATAACATAACAGCATTTGTTATTTCATATTCTTCT
ACATAGTTTGATAACAATTACATACATACATCATAAATTGTGAATGA Coding sequence (CDS) from alignment at Sc0000000:4151282..4153528- >transcript:BL82014_cuf1 ID=transcript:BL82014_cuf1|Name=transcript:BL82014_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=951bp|location=Sequence derived from alignment at Sc0000000:4151282..4153528- (Branchiostoma lanceolatum)
ATGTGGTCTCCTACTGGACAACCCAATGGTGAAGAAATAAGAGAAGACTG
GCCTTTTGATGCAAGAAGAAGAGAACAAGAAAGATATGGAAACTGTGCAA
CAACAACTTGGACCACAGATCCAGGACTAAAACTCACACCTGACATGTGG
AGTCCGCTGGTGAGCAGTACAACAAGTGGTGGATATGAAAACGCACAAGG
ACATAGCTGGGATGGAAGCAATCAGAAAGACAAGCCAAAAACAAACCATC
AGTGCTTGCAACATCAAGGCAGAGGTCTGGTTTGGCCGTGCTACCTTTGT
GGCTCAGAGTTAAGTTCAGTGTCAATTTTAGACAAACATATCAGTTCCCA
TGGATTCCAAGGAAAGCGTAACTCCACGACCCAGCAAGTAGTCATAGGAC
CTGATTCGTCGAGCGTACCAACTCCTGTACAAACTCACCCCATAGAACGT
ATTTTCCCCTGCAGTTTTTGTGAGAAGAACTTCACCAATAAGGCATATAT
GAAGATGCACATGCGTGTACATACCGGTGATAAACCGTACAAATGTAAGA
TGTGTGACAAGGCTTTTAGTCAGCATGGTACCCTGAAGAACCACATCCGC
ACACACACTGGCGAGAAACCTTTCGTCTGCGAGTTTTGTGGCATGCGTTT
TACAAGCAAAGGCAATATGATAACACATACACGCATTCATACAGCGGATA
AGCCTTATGACTGCCAAGCATGCAATAAGAAGTTCAGTCAACTTGGTAGC
TTAAAAGTCCACATGCGTAAACACACCGGTGAGAGACCATTCACGTGCCA
GGTGTGTGGTATGAAGTGCATCACTAAGGGTAACCTTAAGACTCACCTGT
ATACTCACACTGGTGAGAAACCACACAGTTGTGGCATGTGTAACAAGAAA
TTTAGCCAGAAGGGAAGTCTGAAGACGCACATGAAAATTCATAATCCTTG
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:4151282..4153528 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82014_cuf1 |
| Biotype | protein_coding |
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