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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81979_cuf2 >transcript:BL81979_cuf2-protein ID=transcript:BL81979_cuf2-protein|Name=transcript:BL81979_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=103bp
CKRCRTKKGVAEESDEEDDRDSFGSGSARRMQYTSSRRHGFYAPPTRSSG
YSSRRPCPCGSPVLPAHAQICYHGYMNPMTYPYRSPHGYQGKQTAQTIVL
QDF Run BLAST on NCBI mRNA from alignment at xfSc0005623:249..1456- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81979_cuf2 ID=transcript:BL81979_cuf2|Name=transcript:BL81979_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1208bp|location=Sequence derived from alignment at xfSc0005623:249..1456- (Branchiostoma lanceolatum)
CTGCAAGAGATGCAGAACCAAGAAAGGGGTAGCAGAAGAGAGCGATGAAG
AGGATGACAGGGACAGCTTTGGTAGCGGCAGCGCCAGAAGAATGCAGTGT
AGGTGTTAGAAAATATATCCATTAAGCTCACAGCCTGCCAAATAGTTTGA
CAATTATACGAATAACGCTTTCGTTAACAAATACGTGACTGTGCCATGTA
GCAAAATCATGTTGATCTACAGAAACTTGTACATGTCAATAATGAATTCA
AAATTAAAACCTTCAGAGCACAATTCAATGACGAACTACATCAACGCCTG
GAAAGCCGATATGCTCCATTTTAAGATTTACCTTTCATGTTGCCACGAGT
TACATTTCAAGTTGATCCACCTATGATGACCACTAGCAGTAGTTGGGAGC
ACGGAAGATGTCTTGTATTGTGCTACATTCCTATGTGCTCTCAACACGAT
GACGAACACGAAAATCTCTTCTTCTACAGATACAAGCTCACGACGTCATG
GGTTCTACGCACCCCCTACCAGATCGAGTGGGTACAGCAGCCGTCGTCCC
TGTCCGTGCGGTTCGCCCGTTCTTCCTGCGCATGCACAGATCTGTTACCA
TGGCTACATGAACCCTATGACGTATCCATACCGCTCCCCACATGGATACC
AAGGGAAGCAGACAGCACAAACTATCGTTCTGCAGGATTTCTGAAAAATC
ATATTCCTCTAATTATAAGGCTCTATGTTTAGCACGATAATGTGCTTCTA
CATGTATCTTATTTTCATCGCTTCACGTGTAGTTCCAAGTGTACTTTACA
ATGTAGGGTTTTTGTCCCAAATATATATAGACCCTGATTGTCCTGCTGAC
AGGGGAATAGCTAGATCACTTTTGTACCGTGCTACTGACTAGTCAAATAA
GGGAGGGGATTTCTCGATCACAGTCCTTATATATACAGTTGACGTTAGCT
GACAGTAGACGTTCTTCCAAACGTGACTGCATGTAGAGTGAATAGCAAAG
TTAAAGCGACGTTTCGGTGCCTGTCAGTCACCTAGCCTAGCTTGCACAGG
GCTTAGGTAAAACACTTGTTGTGTATAAAGTATGTTGTTATCCAGTGACT
TACCAAACAGTGATAAAACTATTCACGGGTGACTGAAGACTATTACGAAG
TCTAGACTATTCTGGTCACATTTTTCATCAACTTTTATATATTAAAACTG
TGTTTGTA Coding sequence (CDS) from alignment at xfSc0005623:249..1456- >transcript:BL81979_cuf2 ID=transcript:BL81979_cuf2|Name=transcript:BL81979_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=624bp|location=Sequence derived from alignment at xfSc0005623:249..1456- (Branchiostoma lanceolatum)
TGCAAGAGATGCAGAACCAAGAAAGGGGTAGCAGAAGAGAGCGATGAAGA
GGATGACAGGGACAGCTTTGGTAGCGGCAGCGCCAGAAGAATGCAGTATA
CAAGCTCACGACGTCATGGGTTCTACGCACCCCCTACCAGATCGAGTGGG
TACAGCAGCCGTCGTCCCTGTCCGTGCGGTTCGCCCGTTCTTCCTGCGCA
TGCACAGATCTGTTACCATGGCTACATGAACCCTATGACGTATCCATACC
GCTCCCCACATGGATACCAAGGGAAGCAGACAGCACAAACTATCGTTCTG
CAGGATTTCTGATGCAAGAGATGCAGAACCAAGAAAGGGGTAGCAGAAGA
GAGCGATGAAGAGGATGACAGGGACAGCTTTGGTAGCGGCAGCGCCAGAA
GAATGCAGTATACAAGCTCACGACGTCATGGGTTCTACGCACCCCCTACC
AGATCGAGTGGGTACAGCAGCCGTCGTCCCTGTCCGTGCGGTTCGCCCGT
TCTTCCTGCGCATGCACAGATCTGTTACCATGGCTACATGAACCCTATGA
CGTATCCATACCGCTCCCCACATGGATACCAAGGGAAGCAGACAGCACAA
ACTATCGTTCTGCAGGATTTCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0005623 | genome | xfSc0005623:249..1456 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81979_cuf2 |
| Biotype | protein_coding |
|
