transcript:BL81934_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL81934_cuf0
Unique Nametranscript:BL81934_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL81934_cuf0

>transcript:BL81934_cuf0-protein ID=transcript:BL81934_cuf0-protein|Name=transcript:BL81934_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=234bp
HKYTMNKVDGTTHTLESIEEEKDLGVTIDKNLTFSKHTQVQVNKANKTLG
LIKHTFSHVDSVSFSLLYKSLVRPHLEYATAIWHPKTKRDRDTVERVQRR
ATKLVKSLANLPYSERLRELDLPTLHYRRQRADIIQLFKITHGFDKVRVN
NHCNLCGRAMFKPSLATNTRGHQFKYQIQKATGPRAHFFPTRVTPAWNKL
SQTTVNSKTVKEFKTRLGQEWGRHPDLYEYQFTY
Run BLAST on NCBI

mRNA from alignment at Sc0000372:82201..82983+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL81934_cuf0 ID=transcript:BL81934_cuf0|Name=transcript:BL81934_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=783bp|location=Sequence derived from alignment at Sc0000372:82201..82983+ (Branchiostoma lanceolatum)
ACACAAGTATACAATGAATAAAGTAGACGGAACAACGCACACGCTGGAGA
GTATAGAAGAGGAAAAAGACCTAGGGGTCACCATTGACAAGAACCTGACT
TTCAGCAAACACACGCAAGTGCAGGTGAATAAAGCAAATAAAACACTAGG
GCTGATCAAGCACACCTTCTCACATGTGGACAGTGTATCCTTCTCACTGC
TGTATAAAAGCCTGGTTCGACCGCACTTAGAATATGCTACGGCAATATGG
CACCCCAAAACCAAGAGAGACCGGGACACGGTGGAAAGAGTGCAACGGCG
AGCAACAAAACTGGTGAAGAGTTTAGCCAACCTACCATATTCTGAAAGGC
TGAGAGAACTGGACCTTCCCACGCTACACTACAGAAGACAGAGAGCCGAC
ATAATACAGCTGTTCAAGATCACACATGGGTTTGACAAAGTCAGAGTGAA
CAACCACTGCAACTTATGTGGGAGAGCCATGTTTAAGCCAAGCTTGGCAA
CCAACACACGGGGACACCAGTTCAAGTATCAAATTCAGAAAGCTACAGGC
CCGAGGGCACACTTCTTTCCCACACGAGTTACCCCCGCTTGGAACAAACT
CTCACAGACCACGGTCAACAGCAAGACAGTGAAAGAGTTCAAGACAAGAC
TGGGGCAGGAATGGGGACGGCATCCAGACCTATATGAGTACCAATTCACA
TACTGATGCTACTACCGCCACAACTAGGACAGCCTTATTACCCGTGAGGG
TATCGACTGGCTGTGGTTCAAGGTAAAGATTCA

Coding sequence (CDS) from alignment at Sc0000372:82201..82983+

>transcript:BL81934_cuf0 ID=transcript:BL81934_cuf0|Name=transcript:BL81934_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=705bp|location=Sequence derived from alignment at Sc0000372:82201..82983+ (Branchiostoma lanceolatum)
CACAAGTATACAATGAATAAAGTAGACGGAACAACGCACACGCTGGAGAG
TATAGAAGAGGAAAAAGACCTAGGGGTCACCATTGACAAGAACCTGACTT
TCAGCAAACACACGCAAGTGCAGGTGAATAAAGCAAATAAAACACTAGGG
CTGATCAAGCACACCTTCTCACATGTGGACAGTGTATCCTTCTCACTGCT
GTATAAAAGCCTGGTTCGACCGCACTTAGAATATGCTACGGCAATATGGC
ACCCCAAAACCAAGAGAGACCGGGACACGGTGGAAAGAGTGCAACGGCGA
GCAACAAAACTGGTGAAGAGTTTAGCCAACCTACCATATTCTGAAAGGCT
GAGAGAACTGGACCTTCCCACGCTACACTACAGAAGACAGAGAGCCGACA
TAATACAGCTGTTCAAGATCACACATGGGTTTGACAAAGTCAGAGTGAAC
AACCACTGCAACTTATGTGGGAGAGCCATGTTTAAGCCAAGCTTGGCAAC
CAACACACGGGGACACCAGTTCAAGTATCAAATTCAGAAAGCTACAGGCC
CGAGGGCACACTTCTTTCCCACACGAGTTACCCCCGCTTGGAACAAACTC
TCACAGACCACGGTCAACAGCAAGACAGTGAAAGAGTTCAAGACAAGACT
GGGGCAGGAATGGGGACGGCATCCAGACCTATATGAGTACCAATTCACAT
ACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL81934gene:BL81934Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL81934_cuf0-E1BL81934_cuf0-E1-1564476830-451375Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL81934_cuf0transcript:BL81934_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000372genomeSc0000372:82201..82983 +
Properties
Property NameValue
Transcript idBL81934_cuf0
Biotypeprotein_coding