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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81928_cuf1 >transcript:BL81928_cuf1-protein ID=transcript:BL81928_cuf1-protein|Name=transcript:BL81928_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=149bp
MALELFPVPLSWVLLALLAVLFYLYALHPFWTFKKMGVPGPTPLPLLGNL
LISFKNGIWNPESSRQRVQQWGKVYGFFFGRTPMLFISDREMLREIFVKK
FHAFTNRQSKGLTLETKPGGRMLTNLRGEDWKDVRSTLSPAFSGGKLKM Run BLAST on NCBI mRNA from alignment at Sc0000731:28363..30746- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81928_cuf1 ID=transcript:BL81928_cuf1|Name=transcript:BL81928_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2384bp|location=Sequence derived from alignment at Sc0000731:28363..30746- (Branchiostoma lanceolatum)
GGCACTTTTCAGCTGTAAGCGCTCGACCGCATCACCTGTGCACGTCCGAC
CTCGCGCACGGCTGCCAAACTTTACCTGCTAATTTTTTCAGTAGCATACA
AGCTTTCATCAGTGTGACGCTTGAGATCAGTTGGGCTGGCTAAAAGAGAA
CTTCCCACCGATATAAACGCACGTTCATGCCGCCGTTAATTTTTTGGGGT
ACGGTCTACACGCGGGGTATCTCAGGAATGAGACCTTGACCCGAACTGGC
ACATTATGTAAACACTTCCGGGGCCGGCTGAGTCATAACCATTCTTGGGT
TACACGTCAGCACAAAACGCAGGCTAAGGCAAAGACAGAACAACAAGAGT
CTCCGCGATTACTAGTATATAGAAAAGGTAAACTGGTTGCGTTGTGTTAG
CTCAGTCTGAAGTTGTCCTGACGAGACTGGAGTCACAACCCGTTGATCAC
CATGGCCCTGGAACTCTTCCCGGTCCCCTTATCCTGGGTCCTGCTGGCGC
TACTAGCAGTTCTGTTTTACCTGTAAGTATGACACATTTTCATGACAGGG
TTCTGTCTCTGAACTCTGCCACGCACGTACGTCGTCACAATCATGGACCG
TTTATGAACTCCAAAGAACGCATTCAATGCATTTTCCTTAGTATAACTTT
AAGCACACGTAACAACAATGTGGCTCGAGGGCCTTAACCTTTGCCCCTTG
TCAGTGCACGTTCTTGTGTTTCATCGAACCAGGGGTCACGGAGGGAAAGG
GTGGATTTGATACATTAACTAAAATTGACCGATATTACTACAAAAACTAA
TTATACTATGCTTACGTACAGCTAGTAACTTACTCTCTAGTCATTCGAGA
CATGGCATCAAATATTGATATTAATGGTTGCCATTCAATTAAGTTTTTCT
TTGTTTCGGCCCCCCTCATAACTTCCAAACGGTATAGTGTGTCATCATTA
AATTTGTAGGGAGTGATGTACACGTAGGCCTTAGGAATTTCTGTAATTTT
GGTAACGTTATGACGTAATTATGACGTTATTATGACGTCATCGATGCGAT
TCTATTGGCTAAATAGGGAATTCCCGTAATAACAAAGGTATTTCACAAAA
AAGTGTGTTTATGGATGTTAAGGTATGCCATGACATCTGACGTCAATGAT
AACTATCTTGACATCAAAATGACGTCATAGAATGACTAGCTATCCCTTGG
GATCCGCCATCTTGGATCGGCCATTTTGAAATTGTTGAAAATTCATTTTT
TTCCACTTATGACCGTAAAACACAATGAAAATAGACTAGAAACGTTAATC
ATGGTTAATAAAATATAAGGTAGTGACGCATTTAAAGGAAAAAAGCCCCT
TTAAAAAACCTTAACGGATGATATGGTTTGTATACGTTACAATTTCAAGG
GTATACTTAAGGTTCTTTGCGCCTCCCCAGGTATGCATTGCATCCCTTTT
GGACCTTCAAGAAGATGGGTGTTCCTGGACCCACCCCTTTGCCACTTCTT
GGAAACTTATTGATATCATTCAAGAACGTAAGTAGGATATGCAGTTATAC
ACGTTTTTTTCTTCTCATAAAAACCAATGGTAGAATCTGAGTGTTTGTGT
GAGTAACATCTGTAACATCATCAGTGGCTGTAATTTGTTGAATTGTCATG
CTGTCTTCATGTGCAGGGAATCTGGAATCCAGAATCATCAAGGCAGCGTG
TGCAGCAGTGGGGTAAAGTGTATGGGTAAGTCCTGGATATGTTTTCACCA
GATTTTGGCTGTGGATCTGTGGACGGGATAATACAAGATTATGACAGGAT
GTTCATATTTTTTCCAATCAGTAAATTAAGAGAAAAATTTGATTCCTCAC
AACATGTTTGTGCTCCGTTCCATGACTAGGTTTTTCTTTGGACGGACTCC
AATGCTCTTCATATCCGACCGAGAGATGCTCAGAGAGATCTTCGTGAAAA
AGTTTCATGCCTTCACCAACCGCCAGGTATCTGTTGCTAGTACCTCTGGT
TGTACCGTTACAATTCAACCTTTATCACTCTACAATAGCCATTTGGCACC
CCAGTCTCTATTGGTTACAGAGTTAGGCTTAGAAGTGAGAAGGTTAAGTG
ATGAAAAATGAAAAGAAATTCATTTAACCAAATTATGATGTAAAATTCCA
AAGCCTTTAACTAACACTATAATGTATATATTATATACTACATACCATAA
TTTGTCCATTTTACTTGAGGTTCTGATTTGTGGATTATCAATTTTTTTTT
CCAAACCAGTCCAAAGGACTTACACTGGAGACAAAACCCGGTGGCCGCAT
GCTGACTAATCTGAGGGGCGAGGACTGGAAGGACGTGCGGAGCACCTTAA
GTCCAGCCTTCAGTGGGGGCAAACTGAAGATGGT Coding sequence (CDS) from alignment at Sc0000731:28363..30746- >transcript:BL81928_cuf1 ID=transcript:BL81928_cuf1|Name=transcript:BL81928_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2235bp|location=Sequence derived from alignment at Sc0000731:28363..30746- (Branchiostoma lanceolatum)
ATGGCCCTGGAACTCTTCCCGGTCCCCTTATCCTGGGTCCTGCTGGCGCT
ACTAGCAGTTCTGTTTTACCTGTATGCATTGCATCCCTTTTGGACCTTCA
AGAAGATGGGTGTTCCTGGACCCACCCCTTTGCCACTTCTTGGAAACTTA
TTGATATCATTCAAGAACGGAATCTGGAATCCAGAATCATCAAGGCAGCG
TGTGCAGCAGTGGGGTAAAGTGTATGGGTTTTTCTTTGGACGGACTCCAA
TGCTCTTCATATCCGACCGAGAGATGCTCAGAGAGATCTTCGTGAAAAAG
TTTCATGCCTTCACCAACCGCCAGTCCAAAGGACTTACACTGGAGACAAA
ACCCGGTGGCCGCATGCTGACTAATCTGAGGGGCGAGGACTGGAAGGACG
TGCGGAGCACCTTAAGTCCAGCCTTCAGTGGGGGCAAACTGAAGATGATG
GCCCTGGAACTCTTCCCGGTCCCCTTATCCTGGGTCCTGCTGGCGCTACT
AGCAGTTCTGTTTTACCTGTATGCATTGCATCCCTTTTGGACCTTCAAGA
AGATGGGTGTTCCTGGACCCACCCCTTTGCCACTTCTTGGAAACTTATTG
ATATCATTCAAGAACGGAATCTGGAATCCAGAATCATCAAGGCAGCGTGT
GCAGCAGTGGGGTAAAGTGTATGGGTTTTTCTTTGGACGGACTCCAATGC
TCTTCATATCCGACCGAGAGATGCTCAGAGAGATCTTCGTGAAAAAGTTT
CATGCCTTCACCAACCGCCAGTCCAAAGGACTTACACTGGAGACAAAACC
CGGTGGCCGCATGCTGACTAATCTGAGGGGCGAGGACTGGAAGGACGTGC
GGAGCACCTTAAGTCCAGCCTTCAGTGGGGGCAAACTGAAGATGATGGCC
CTGGAACTCTTCCCGGTCCCCTTATCCTGGGTCCTGCTGGCGCTACTAGC
AGTTCTGTTTTACCTGTATGCATTGCATCCCTTTTGGACCTTCAAGAAGA
TGGGTGTTCCTGGACCCACCCCTTTGCCACTTCTTGGAAACTTATTGATA
TCATTCAAGAACGGAATCTGGAATCCAGAATCATCAAGGCAGCGTGTGCA
GCAGTGGGGTAAAGTGTATGGGTTTTTCTTTGGACGGACTCCAATGCTCT
TCATATCCGACCGAGAGATGCTCAGAGAGATCTTCGTGAAAAAGTTTCAT
GCCTTCACCAACCGCCAGTCCAAAGGACTTACACTGGAGACAAAACCCGG
TGGCCGCATGCTGACTAATCTGAGGGGCGAGGACTGGAAGGACGTGCGGA
GCACCTTAAGTCCAGCCTTCAGTGGGGGCAAACTGAAGATGATGGCCCTG
GAACTCTTCCCGGTCCCCTTATCCTGGGTCCTGCTGGCGCTACTAGCAGT
TCTGTTTTACCTGTATGCATTGCATCCCTTTTGGACCTTCAAGAAGATGG
GTGTTCCTGGACCCACCCCTTTGCCACTTCTTGGAAACTTATTGATATCA
TTCAAGAACGGAATCTGGAATCCAGAATCATCAAGGCAGCGTGTGCAGCA
GTGGGGTAAAGTGTATGGGTTTTTCTTTGGACGGACTCCAATGCTCTTCA
TATCCGACCGAGAGATGCTCAGAGAGATCTTCGTGAAAAAGTTTCATGCC
TTCACCAACCGCCAGTCCAAAGGACTTACACTGGAGACAAAACCCGGTGG
CCGCATGCTGACTAATCTGAGGGGCGAGGACTGGAAGGACGTGCGGAGCA
CCTTAAGTCCAGCCTTCAGTGGGGGCAAACTGAAGATGATGGCCCTGGAA
CTCTTCCCGGTCCCCTTATCCTGGGTCCTGCTGGCGCTACTAGCAGTTCT
GTTTTACCTGTATGCATTGCATCCCTTTTGGACCTTCAAGAAGATGGGTG
TTCCTGGACCCACCCCTTTGCCACTTCTTGGAAACTTATTGATATCATTC
AAGAACGGAATCTGGAATCCAGAATCATCAAGGCAGCGTGTGCAGCAGTG
GGGTAAAGTGTATGGGTTTTTCTTTGGACGGACTCCAATGCTCTTCATAT
CCGACCGAGAGATGCTCAGAGAGATCTTCGTGAAAAAGTTTCATGCCTTC
ACCAACCGCCAGTCCAAAGGACTTACACTGGAGACAAAACCCGGTGGCCG
CATGCTGACTAATCTGAGGGGCGAGGACTGGAAGGACGTGCGGAGCACCT
TAAGTCCAGCCTTCAGTGGGGGCAAACTGAAGATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000731 | genome | Sc0000731:28363..30746 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81928_cuf1 |
| Biotype | protein_coding |
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