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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81926_cuf2 >transcript:BL81926_cuf2-protein ID=transcript:BL81926_cuf2-protein|Name=transcript:BL81926_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=114bp
MYKQQSFNWRELADKGACVPNSMYVSRADVTYDAVAADKMTKCCNLRKKM
LQAAGLVIVIVIFFLLPYFAVKVATISADVAKLSEELAILSDTMAKLNSM
AQLRFAKLEREIVS Run BLAST on NCBI mRNA from alignment at Sc0000155:701512..704469+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81926_cuf2 ID=transcript:BL81926_cuf2|Name=transcript:BL81926_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2958bp|location=Sequence derived from alignment at Sc0000155:701512..704469+ (Branchiostoma lanceolatum)
ATCCAACAAAAAGCTCGCCCGGGTATTATCTTATACTAGATGATGATAGC
CTGAAGTAGTCTTTTGTGTTTTCTTCGTTGGAAATGAACACACTTGTAAA
GCCTATATATCAAAATAGGATTTCTAGATTTCCACAATGATTTCCACAAT
ATAATACTGAATATTATGTTACTCGAACCAATGTAAAGTCTACCTGGATT
TGTTTACATTCTTTCATTTCAGTAGCAATGTGGTTGAAGTGCTTGAGCAC
GAACCGTAAAATCCTGATTATAATTACATATTTCAACAAGCACTACAATG
GACCACAGGAAGAGTAGCTGTTAAGCTAATTGTGGATCCTAATAAACTCA
AACTCAAACTACCTGTTGCTTAACATGAGAGCTGAAAGATTTCAACTGAT
CTTACAGTTGATAATGTTCTTTTCCTGCAGACATCATGTACAAGCAACAG
TCATTTAACTGGAGAGAACTTGCCGACAAAGGCGCATGCGTACCCAACTC
TATGTACGTTTCCCGTGCAGGTAAAACGCTCTCCAGAACTTTCTTGTTAC
CTCCGCGAAGGAGGTCAGTCACCTCAGACAGGAGTACTGTTTTGTCTGTG
TTTGTGTGTTTGCAGCTATAACTCAAAGCCCTTATGATTAATTTGCTTCA
ATTTTGGCGTGTTGGTCGTTATTGAGGTCCCGGTGAAACATGGCGATTTT
ATTTGTTTATTTTATTCTTATTTATTTATTCTTTGTCTCAGGCCGAAGGC
CCATATGAAAAAAAAAGACAATTTACAGACATCTACATATAACAACAACA
ACAACATAAAATATTGCATATCAAGTAGTGTCGAAACGAGCAGGCGGGGC
AAAGATTTTGTCCACCGCAGCAGTATTTTCAGGTTTTATTATTAGGAGAA
TTATAGATCGACAGCCCCCCCCCTCTTGAAGGTAATGTGGAATAGCCATT
TAACAGCAGTCGTTTGCCTAATGTAGCCAGTGTCATACAAGCTGGGACCA
ATGAACTACTCTCCAAGCAGAGGTTAGGCTCCGGCTTGCCACACTGCCTT
GGTTACTGCCCAGTGTTATGATTAACAACTACCTGGACATAAATGAGAAA
CAGTTTTTAAAAAAAATCAGTACTCCTCGTAAAGAAGCTATCCAGCATCC
TAGCCCATACCACAAATACAATGATTACTACACGGAGGTTTGTCTCCTAC
GGACTCTTGTTTTCATGCTGTTGCTCCTTTGCTTTGCACCTCTTGATTTG
GCTTTGATTAGTCTGGGAATGATCAAAGGTCTTTCTTCAGATCTCTTGGC
TCTTATTTTCATCGTGAAACTATTGTGTTGAATGTTCATCCTTGAAATAA
TGCTTGATAGATGTAAGTTTTATAAGCTACACTGGTCAGTGACGACGACG
TTAGGCCGCTGGCATCAACTGAAACAACAACAAAAAATTGTCAATCTTCA
ATTACGTACATATGTCTTGAAATGATGAAGGCTGATGCAATACTGATGGC
CGGAATTGTTTTGACTGCAACATGCGTTGATGCTATCTAAAACTCCCCGT
TTTAAACGTAGTTTTGAAATAAAAGAGGTTTAATGTTTGTGTTCTATTTC
TTCTAAAAGATGTAACCTATGATGCGGTCGCTGCTGACAAGATGACAAAA
TGTTGCAACCTCCGCAAGAAGATGTTGCAAGCCGCCGGCCTTGTGATCGT
CATTGTTATATTCTTTCTGTTGCCATATTTTGCAGGTCAGTTGTTTATCA
CTTACGCTTTTACAGATACTAATTTCTGTTCTGTAAGTCAGCGGTCGAAT
TACTGGGTGCATATGCACTTTTGTGGACCTAAAATGGGAGCTGTGCACCT
CGTCATTTTTGACTGTGGGTGCACCGACAGGTGTACGTGGATATTTGTGT
GGGTTATGTACTAAATATTGCTAATGTAGCATATTCTTGACATTTAAGTG
TCAGAGAAAAAATAGTAAAACCTTTGTTGTATTACTTGTTTGAACTTTTG
AAGTTAGTTGCAGTAAGATTTTAGATTTTGCTGTCGGTGTCATTCTGCTG
CTGCTAGTATGCTGTGCACCCAAGGTTTTTTCTGTGCACCTAAATTGTGC
ACCACTGCACCTATCCCCAAAAATGAATTTCGGGTTCTGACTATGGTTTT
GTAGCATTCTTGTTGCAGAGCTAAGTAACTGCAATCCTCTTTTTTGTTTA
ACAGTGAAAGTCGCCACCATTTCTGCTGACGTGGCAAAGCTGTCTGAAGA
GCTGGCGATTCTTTCTGACACGATGGCCAAACTGAACAGCATGGCCCAGC
TGCGATTCGCCAAGCTGGAACGTGAGATTGTGTCCTGATATTATTGTTAT
TAATGCCAATGTTACCACCGATCCTTCAATTTCTAGAAGGTGCCAAATTG
AGAGATTATAGTTTTTTTTCTTTTCTTTTATTGAGATACTGTTTTTTTTT
TCAATCGTCATTGAAATGACTAACATTTTTCCGCATAATGTACTGAATAA
TTGTGACATTTCTGAAAATGAAATCCAACATTTTCTGCTGTAGAATCGCA
CATAAGCAAAAGTGCATTTACCATAGCATTGATCTGTAGAAATTTCCGCT
ATTTGCATACTGAGTGGGCGTTATTCCTAGACATATGAATGTGATGGTAA
AAGAAAAACAATTGTGTACATGTTATCACAGCTACCTACTATATGATCAA
ATTGTGCATTGTATACATGTGATTCATACCATAGAGAAATGGAGGCATGG
TAAATGATTTTTTCTTCAACGTTTATATTAAAAAAAAATCAATTCTGTCA
TCTGTATAAGTATAGCTTGAAAGTTGAAAGTGTAACCCAATTGACGTAAT
TCTTTTGTAAGACTTTAGGTTGTCCTGCTGTCCAGCGATATTTGTTTTGC
AAATTGTTTGCACTGCCTTTTGCGGATCAACCTTCCTGTATCAAACAATA
AACTCTTT Coding sequence (CDS) from alignment at Sc0000155:701512..704469+ >transcript:BL81926_cuf2 ID=transcript:BL81926_cuf2|Name=transcript:BL81926_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1035bp|location=Sequence derived from alignment at Sc0000155:701512..704469+ (Branchiostoma lanceolatum)
ATGTACAAGCAACAGTCATTTAACTGGAGAGAACTTGCCGACAAAGGCGC
ATGCGTACCCAACTCTATGTACGTTTCCCGTGCAGATGTAACCTATGATG
CGGTCGCTGCTGACAAGATGACAAAATGTTGCAACCTCCGCAAGAAGATG
TTGCAAGCCGCCGGCCTTGTGATCGTCATTGTTATATTCTTTCTGTTGCC
ATATTTTGCAGTGAAAGTCGCCACCATTTCTGCTGACGTGGCAAAGCTGT
CTGAAGAGCTGGCGATTCTTTCTGACACGATGGCCAAACTGAACAGCATG
GCCCAGCTGCGATTCGCCAAGCTGGAACGTGAGATTGTGTCCTGAATGTA
CAAGCAACAGTCATTTAACTGGAGAGAACTTGCCGACAAAGGCGCATGCG
TACCCAACTCTATGTACGTTTCCCGTGCAGATGTAACCTATGATGCGGTC
GCTGCTGACAAGATGACAAAATGTTGCAACCTCCGCAAGAAGATGTTGCA
AGCCGCCGGCCTTGTGATCGTCATTGTTATATTCTTTCTGTTGCCATATT
TTGCAGTGAAAGTCGCCACCATTTCTGCTGACGTGGCAAAGCTGTCTGAA
GAGCTGGCGATTCTTTCTGACACGATGGCCAAACTGAACAGCATGGCCCA
GCTGCGATTCGCCAAGCTGGAACGTGAGATTGTGTCCTGAATGTACAAGC
AACAGTCATTTAACTGGAGAGAACTTGCCGACAAAGGCGCATGCGTACCC
AACTCTATGTACGTTTCCCGTGCAGATGTAACCTATGATGCGGTCGCTGC
TGACAAGATGACAAAATGTTGCAACCTCCGCAAGAAGATGTTGCAAGCCG
CCGGCCTTGTGATCGTCATTGTTATATTCTTTCTGTTGCCATATTTTGCA
GTGAAAGTCGCCACCATTTCTGCTGACGTGGCAAAGCTGTCTGAAGAGCT
GGCGATTCTTTCTGACACGATGGCCAAACTGAACAGCATGGCCCAGCTGC
GATTCGCCAAGCTGGAACGTGAGATTGTGTCCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000155 | genome | Sc0000155:701512..704469 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81926_cuf2 |
| Biotype | protein_coding |
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