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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81848_cuf0 >transcript:BL81848_cuf0-protein ID=transcript:BL81848_cuf0-protein|Name=transcript:BL81848_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=177bp
MRQHTGEKPYRCDQCDYSAARKEDLNQHVMIKHTGEKPYVCRECWYKTAI
RANLSRHMRTHTGEKSYKCDQCDYSAAVKCALDKHMTKHTGEKPYMCKEC
GYRTADRSHLSRHIRTHTGEKPYKCDQCDYSAAQKGELDRHVMVKHTGEK
PYMCAQCGYRTADRSALSRHTKTHSGD Run BLAST on NCBI mRNA from alignment at Sc0000028:806299..809919- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81848_cuf0 ID=transcript:BL81848_cuf0|Name=transcript:BL81848_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3621bp|location=Sequence derived from alignment at Sc0000028:806299..809919- (Branchiostoma lanceolatum)
CGTTGCTACCACGGCAGCCGCCATTTCTGGTCGACGTCATCTTCTTCAGG
ATCATTTCTTCTCTGAACTGACGGCCTTTAAGATCGCAGATATCTGAAAC
CACGTATTATATTTCATTGTTGTTTACACTAGCTATGTGGTGCTTTTGTA
GAATAAGAAGTGCGTTTGTAATCGGTATTGGATAGGGAGAGTGTAACTGT
AATGCGTCAAATGTATATGTAACAGCTGGAACTTGTTGTGTTGTATTATG
TTGTTGTATTGATACAACCAGTGGGTACCTATCTAAGTAACGAGGCTTGA
GTAACAGTAGTAGTGAGGTGCTCAAGAGGCCTCCTCGAACAAAGGGCGCC
TATTTTACGTATTCATTTCACGTCTGATGATCGGAAAGACGCAGCTTCTA
CCAGAATCCCTCCCGGATACAAACGGGTCTCCCAGTTACGTACCTTGAAC
TAATTTAAACCAGGTGCTCAACTGTGAAGCCGCTTCCAATTGAGTTACAG
GGACGTTCCAATTTGTACCTTGAAAGTATCATCAGAATACTCGAAAGACT
TATTTTTGTTACCTGTATTATGAGTAGGTCTTGGCATTTGTTTTTTTAAT
TTTCTATTAGAATAAAAAAAAAAGTACCCGTCCACATTCTCCAGTTACAT
CACGCTGAGAAACTGGCTGGAAGCGGGGTCAAGTGGGGTTAAGGACTTGG
CAATTTATCTTGAAGGAAGCTGGTGGTGACTTGAGGCTCCTACTAGTAGC
TAGCATCCCAGGACACATGTGCAGGGCCAGGGTCAATAGAAGTCCTTGAT
ACTAGTTTCGGGTTGTTCACTTTTCCCAGAAAAAACTAAATAAGCTTAAG
AAAGACTACTGAAGGGGTTTAGATTTTAAAATCAGTGTGAAATGAAAAAA
AGTAACTTTGCAAACTATTTCAAAGAGTTACGAAATGTATATATGTTGGT
TGTTCATATTGTCCCCACCCTTTTCTGGTTTCTAAGCCCCCTTATTTATA
TCTATATTACCAATATTTTCTCTCTCTATCTCACAGATGGACCAGTTTGT
AAGTCAGCATCGCCTCAAGGATATTCATCGTGAACAAACTGCGAACGAAA
CTATCATCAAAGAGGAGGAGACAGGAGACACGAGATGGCAACGTGACGAA
GAATGCGAGCCATTCCAGAAAACATATAGTGATGACCAAGACACCTACGA
CTACTACGGCACAACCCAACCAATGGGATATCATGGGAACTTGCGGGGAA
CTTACAACTGCGGGGAGCAGACAACCGACACGGGGCGACAGCAAGACATT
CTAAGGGAGGAAACGGGCGGGGTAAACCATAAGTTGGGGACGTGCAACAT
AGGGGAACAAACAACAGATACGGCACGGCAGCAGGACGAGAAACAAAACA
TTTCAAACGATGCTTGCCGTGTAAACTTTACCGAGTATGACGAAGAATTA
TTGCCGCAGACAGCTGCAAAGAGCCATGCAGTGCAGGCGGGCAGCCATGT
GCTTAAGCATACCTTCATTTGCTGGAAATGTGGTTACAGGTCGACTTAAA
AGAGTCACCTGTTTAGACACATGAGACAGCATACTGGTGAGAAGCCCTAC
AGATGTGACCAGTGCGACTATTCTGCAGCACGGAAAGAAGATTTAAACCA
ACACGTTATGATAAAACACACCGGTGAGAAGCCGTACGTATGTAGAGAGT
GTTGGTACAAGACTGCTATTAGGGCTAACCTATCCCGACACATGAGAACA
CATACAGGTGAGAAATCCTATAAATGTGACCAGTGCGATTATTCTGCAGC
TGTTAAATGCGCCCTGGACAAGCATATGACTAAACATACCGGTGAGAAAC
CCTACATGTGTAAGGAGTGCGGATACAGGACGGCTGATAGGTCTCACCTC
TCCCGACATATTAGGACACATACGGGCGAAAAACCCTACAAATGTGACCA
GTGCGATTATTCTGCTGCACAGAAAGGCGAATTAGACCGACACGTCATGG
TAAAACACACCGGTGAGAAGCCCTACATGTGTGCGCAGTGTGGATACAGG
ACGGCGGACAGGTCAGCTCTATCGCGACATACAAAAACGCATTCCGGTGA
TTAATCTTACAAATATGACCATTTGTGTGACTAATCTGGAGCAGAGAAAA
GAGACCAAGAGTGACACGTTGTTATGAAAAACTCTGGTGCGAAACCCTAT
ACGTGTGAAACAGCACGGCTATCATGGCTGAGCTAACCCGACTGCCGTGA
GAAAACACAATGGCGGAAAAACTGCAAATGTGATCAGTGCGACTATTCTA
CAACACAAAAAGTAGTTTATATAAACACATGGCTAAAGATACGAGTGAAA
AAAACCTCATGTATTTTAGAGAATTACGACCACTTTGCGGCTGGTAGATA
TCATTTTCAGCAATAGATTAAAAAATACCTCCACTCCTATTGAGTGCCAC
TGTAGCATGCTATGCTGTCCTTTCAACATCAATTATTCCAGGGTGACAAA
TTCCTACTGTCGCTTATTCAAAGTACAAAGTATACTAGCAAGTGCCGCAA
AAATAGTGTTGCAGTACTGTGAATGGTCAAACGAGGGCGTTGTACTTTTA
AACGTGACGGGGTTGCATTTATGCAACCAGCTTCACGCTTTTCCGACCCT
TTACCCTCATTAAGAGCAAGTCTGAGATAGATTTCTTCAATATAGTATTG
CCCCTTTGTAGCCATGAGTTGACACCTCCGGTGAGAAACACTACATGTGC
AGAGAGCAAACAACACATTGTGGTGTAAAAACATACATCGGATGATTTCG
ACCAGTCCCAAGCAAAATACGTCTGACTCATGGGGACAAGCCGTTGTTGG
TAAAGACTGGGGGAAGATGATGTCACAAAACCATTCCACTTGTCACTAAT
TAAATCATAAGGTCAGTTAAGACACCCACAAGCAATCATATCTATTTCAC
ACGTCAGAAAAACAAAAACAAAAAAATTGTACTTGTAGTTTATTTTTTCT
GACTTGGTACACGTACTGAAATGTAAAATTGAGTCTATATCTTTACCCTC
TGCTTTCTGATTTAGCTTTTCGTTGAATATAAGTATATTGTACTTGTAGT
TTATTTTTTCTGACTTGGTACACGTACTGAAATGTAAAATTGAGTCTATA
TCTTTACCCTCTGCTTTCTGATTTAGCTTTTCGTTGAATATAAGTATATT
GTACTTGTAGTTTATTTTTTCTGACTTGGTACACGTACTGAAATGTAAAA
TTGAGTCTATATCTTTACCCTCTGCTTTCTGATTTAGCTTTTCGTTGAAT
ATAAGTATATTGTACTTGTAGTTTATTTTTTCTGACTTGGTACACGTACT
GAAATGTAAAATTGAGTCTATATCTTTACCCTCTGCTTTCTGATTTAGCT
TTTCGTTGAATATAAGTATATTGTACTTGTAGTTTATTTTTTCTGACTTG
GTACACGTACTGAAATGTAAAATTGAGTCTATATCTTTACCCTCTGCTTT
CTGATTTAGCTTTTCGTTGAATATAAGTAGGCAAATTCACTAGATTTTAA
ACGAAATGTATCATATTGACATTCTTAAGCATAATTAAAGAACACATATT
GACAGTGTGTTTATAGTGCAC Coding sequence (CDS) from alignment at Sc0000028:806299..809919- >transcript:BL81848_cuf0 ID=transcript:BL81848_cuf0|Name=transcript:BL81848_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=534bp|location=Sequence derived from alignment at Sc0000028:806299..809919- (Branchiostoma lanceolatum)
ATGAGACAGCATACTGGTGAGAAGCCCTACAGATGTGACCAGTGCGACTA
TTCTGCAGCACGGAAAGAAGATTTAAACCAACACGTTATGATAAAACACA
CCGGTGAGAAGCCGTACGTATGTAGAGAGTGTTGGTACAAGACTGCTATT
AGGGCTAACCTATCCCGACACATGAGAACACATACAGGTGAGAAATCCTA
TAAATGTGACCAGTGCGATTATTCTGCAGCTGTTAAATGCGCCCTGGACA
AGCATATGACTAAACATACCGGTGAGAAACCCTACATGTGTAAGGAGTGC
GGATACAGGACGGCTGATAGGTCTCACCTCTCCCGACATATTAGGACACA
TACGGGCGAAAAACCCTACAAATGTGACCAGTGCGATTATTCTGCTGCAC
AGAAAGGCGAATTAGACCGACACGTCATGGTAAAACACACCGGTGAGAAG
CCCTACATGTGTGCGCAGTGTGGATACAGGACGGCGGACAGGTCAGCTCT
ATCGCGACATACAAAAACGCATTCCGGTGATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000028 | genome | Sc0000028:806299..809919 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81848_cuf0 |
| Biotype | protein_coding |
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