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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81781_cuf0 >transcript:BL81781_cuf0-protein ID=transcript:BL81781_cuf0-protein|Name=transcript:BL81781_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=165bp
DGYRCGRDTDQDGWPDEPVSCLVRWCKQDNCPLEPNSGQEDNDGDNMGNV
CDQDDDNDGRLNTVDNCIFVSNWDQADTDGDGYGDVCDTCPLVANQDQTD
TDGDGTGDECDDDDDGDGLPDASDPCPLLNDTQSDADGDCVSDVNDNCPD
FINANQQDTDMDGYG Run BLAST on NCBI mRNA from alignment at Sc0000022:2543080..2544277- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81781_cuf0 ID=transcript:BL81781_cuf0|Name=transcript:BL81781_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1198bp|location=Sequence derived from alignment at Sc0000022:2543080..2544277- (Branchiostoma lanceolatum)
AGACGGTTACCGATGCGGACGTGACACTGACCAGGACGGGTGGCCTGATG
AACCTGTGTCATGTCTGGTGCGCTGGTGCAAGCAGGTAATGCATTGTCTC
TTATGGAGGAGACCTAAGTAATAACAACGACAACCACTGCATATTGAATC
TATGGAAAACGGCGGTGTTTCTATCGCTGGACGCAAGGATGTCTGTAACC
ATTGTTAGTTGATTTTTATATCAATGTCGTCCTGCGTCAGAGCGCTTTTA
CCATAGATATTTTGTGTGGTGCAGTGATTCGGTGTCTTCGATCGATGGCA
TGGAGAGACAACAATGTCAATGTAGCCATGTTTCACCAAGATTGATTCAA
TTGCTTTATTTGCCATCACACGCACACAGGATAACTGTCCCCTCGAGCCT
AACAGTGGACAGGAGGACAACGATGGCGATAACATGGGAAACGTCTGTGA
CCAGGATGACGACAACGACGGGCGACTAAACACTGTTGTAAGTCCGTCTT
ATATATCAGAATTTTAATTTTCAAAGATAGGAAAAGTATCTCTAGGTAAA
GAGTAATTATTATTAATGCTTAGGGCATCGGGATATCTGAATGTTTATGA
AGCTAGTACTATTTTTCTACTGTAACCTTCCTAAATACAACAAATGAGTT
TCCAATCCCACAGGACAATTGTATATTCGTTTCGAACTGGGATCAAGCAG
ACACCGATGGCGACGGTTACGGTGACGTATGTGACACGTGCCCACTCGTG
GCCAATCAGGACCAGACTGACACTGACGGAGATGGCACTGGGGACGAGTG
TGATGATGATGACGATGGTGATGGTAAGTGTAATCTCTTTCCTTATTAGA
GGGCAACAAAAATGCGTTGTCAATACTCTGCGCCTCCAGCATACAGCTAA
GCAATGATTTGCCCAGAATCACTGAGATTCAAAGGAACTATCAAGTGAAT
ACTTTTTTTTAATTTGAAACTAGAAGAAGCAAGAGTTCTGAATTCTTTGG
TCTTTCCCATGAAATATATCTTAACGCTCAGTAAATTGGATGTATTTTCT
ATAGGTTTGCCGGATGCGTCAGACCCATGTCCGCTTCTAAACGATACGCA
GTCCGATGCAGACGGCGACTGCGTCAGTGACGTCAACGACAACTGCCCTG
ACTTCATTAATGCTAACCAACAGGACACGGACATGGACGGGTATGGGG Coding sequence (CDS) from alignment at Sc0000022:2543080..2544277- >transcript:BL81781_cuf0 ID=transcript:BL81781_cuf0|Name=transcript:BL81781_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1980bp|location=Sequence derived from alignment at Sc0000022:2543080..2544277- (Branchiostoma lanceolatum)
GACGGTTACCGATGCGGACGTGACACTGACCAGGACGGGTGGCCTGATGA
ACCTGTGTCATGTCTGGTGCGCTGGTGCAAGCAGGATAACTGTCCCCTCG
AGCCTAACAGTGGACAGGAGGACAACGATGGCGATAACATGGGAAACGTC
TGTGACCAGGATGACGACAACGACGGGCGACTAAACACTGTTGACAATTG
TATATTCGTTTCGAACTGGGATCAAGCAGACACCGATGGCGACGGTTACG
GTGACGTATGTGACACGTGCCCACTCGTGGCCAATCAGGACCAGACTGAC
ACTGACGGAGATGGCACTGGGGACGAGTGTGATGATGATGACGATGGTGA
TGGTTTGCCGGATGCGTCAGACCCATGTCCGCTTCTAAACGATACGCAGT
CCGATGCAGACGGCGACTGCGTCAGTGACGTCAACGACAACTGCCCTGAC
TTCATTAATGCTAACCAACAGGACACGGACATGGACGGGTATGGGGACGG
TTACCGATGCGGACGTGACACTGACCAGGACGGGTGGCCTGATGAACCTG
TGTCATGTCTGGTGCGCTGGTGCAAGCAGGATAACTGTCCCCTCGAGCCT
AACAGTGGACAGGAGGACAACGATGGCGATAACATGGGAAACGTCTGTGA
CCAGGATGACGACAACGACGGGCGACTAAACACTGTTGACAATTGTATAT
TCGTTTCGAACTGGGATCAAGCAGACACCGATGGCGACGGTTACGGTGAC
GTATGTGACACGTGCCCACTCGTGGCCAATCAGGACCAGACTGACACTGA
CGGAGATGGCACTGGGGACGAGTGTGATGATGATGACGATGGTGATGGTT
TGCCGGATGCGTCAGACCCATGTCCGCTTCTAAACGATACGCAGTCCGAT
GCAGACGGCGACTGCGTCAGTGACGTCAACGACAACTGCCCTGACTTCAT
TAATGCTAACCAACAGGACACGGACATGGACGGGTATGGGGACGGTTACC
GATGCGGACGTGACACTGACCAGGACGGGTGGCCTGATGAACCTGTGTCA
TGTCTGGTGCGCTGGTGCAAGCAGGATAACTGTCCCCTCGAGCCTAACAG
TGGACAGGAGGACAACGATGGCGATAACATGGGAAACGTCTGTGACCAGG
ATGACGACAACGACGGGCGACTAAACACTGTTGACAATTGTATATTCGTT
TCGAACTGGGATCAAGCAGACACCGATGGCGACGGTTACGGTGACGTATG
TGACACGTGCCCACTCGTGGCCAATCAGGACCAGACTGACACTGACGGAG
ATGGCACTGGGGACGAGTGTGATGATGATGACGATGGTGATGGTTTGCCG
GATGCGTCAGACCCATGTCCGCTTCTAAACGATACGCAGTCCGATGCAGA
CGGCGACTGCGTCAGTGACGTCAACGACAACTGCCCTGACTTCATTAATG
CTAACCAACAGGACACGGACATGGACGGGTATGGGGACGGTTACCGATGC
GGACGTGACACTGACCAGGACGGGTGGCCTGATGAACCTGTGTCATGTCT
GGTGCGCTGGTGCAAGCAGGATAACTGTCCCCTCGAGCCTAACAGTGGAC
AGGAGGACAACGATGGCGATAACATGGGAAACGTCTGTGACCAGGATGAC
GACAACGACGGGCGACTAAACACTGTTGACAATTGTATATTCGTTTCGAA
CTGGGATCAAGCAGACACCGATGGCGACGGTTACGGTGACGTATGTGACA
CGTGCCCACTCGTGGCCAATCAGGACCAGACTGACACTGACGGAGATGGC
ACTGGGGACGAGTGTGATGATGATGACGATGGTGATGGTTTGCCGGATGC
GTCAGACCCATGTCCGCTTCTAAACGATACGCAGTCCGATGCAGACGGCG
ACTGCGTCAGTGACGTCAACGACAACTGCCCTGACTTCATTAATGCTAAC
CAACAGGACACGGACATGGACGGGTATGGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000022 | genome | Sc0000022:2543080..2544277 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81781_cuf0 |
| Biotype | protein_coding |
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