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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81756_cuf4 >transcript:BL81756_cuf4-protein ID=transcript:BL81756_cuf4-protein|Name=transcript:BL81756_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=113bp
MYFSNCSKSDFRRGQQLGEGEIDLGGNVFNKGMFEICCRQPVANLTDQQP
TIADLIPHLGVRLDVVGCWSARISTQHTRYQVPRFHRLCRGTSAALRSVH
MLSLSTYRYVLFN Run BLAST on NCBI mRNA from alignment at Sc0000291:189758..192829- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81756_cuf4 ID=transcript:BL81756_cuf4|Name=transcript:BL81756_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=3072bp|location=Sequence derived from alignment at Sc0000291:189758..192829- (Branchiostoma lanceolatum)
TTGAAGAATACACACAGTTCTGTGCACACGAATTTCGTGTCAAAATTTTA
AAGATGCTGTACTTTTTGGAGTGTTGACGACCTACTAATCTACCAGAGCG
GTGGGTGCAGACTACTTTGGACAAGGTATCAACAGTTTTGTAGCAGGTAA
GCATGCCAAAACGTCATAACTTGTACGTCGCGTCGATGGTCTTCGGGGAG
GGGGGCTGTAACAGTGACACCTATTAAACCAAGGATTAAACTCAGTTACT
GAGATATAATCTCATCTACAATCAGAAAAGTAACGTCAGTACGAAGTATA
TTTGGACCTAGGACGTACTTGTTTAACCACAATATTTCCCGTAAGATAAT
TTGAAATCGAGAAAATAGCGCTAGCCTGAGTATCCACAGGGAAACGACCT
ACCGACATTAGATTTCGGCCATTTTATGCAAATTAGCGATTTTGCGACAG
ACCGGAAAATGGCGTCCCATCTGGCCCATTCAAACTTCCCACCAAACTGG
AATTAGTAGAATAAGTTCTCTTCGTGGTACGCATTTAGAATTTATATCAA
ATTGTAGGTAGATTTGTCATAAAGATGATGGCGAAAACCGCACGGGGGTA
CCATTGAGAGGTAAGCTCAGACACGTCCGAAGAGTTGTAATACATTTAGA
TATGAAGTTCTGATGTGACCTCGCGAGATCTCATGCGATCTTGCGCTGTT
TCGCGAGTTTCGCGAGATCTCGTGTGATTTTGCGACAAGAAGTGAAATTA
CGGCCCGAAGCTGCCGGGGAGCTTACTTTAAGATGGAAATTTCACATAGA
NTTGTAGCAGGTAAGCATGCCAAAACGTCATAACTTGTACGTCGATGGTC
TTCGGGGAGGGGGGCTGTAACAGTGACACCTATTAAACTCAGTTACTGAG
ATATAATCTCATCTACAATCAGAAAAGTAACGTCAGTACGAAGTATATTT
GGACCTAGGACGTACTTGTTTAACCACAATATTTCCCGTAAGATAATTTG
AAATCGAGAAAATAGCGCTAGCCTGAGTGTCATCTTATTATTTTATCAAT
TATTTCAGATACAGACAAGGAGAGAAGCGGAAAAGAAACTACCATGCCCA
CTGGTAACACCNGAACCTTTCAAAATGGCGGCTTGAAGAATACACACAGT
TCTGTGCACACGAATTTCGTGTCAAAATTTTAAAGATGCTGTACTTTTTG
GAGTGCTGACGACCTACTAATCTACCAGAGCGGTGGGTGCAGACTACTTT
GGACAAGGTATCAACAGTTTTGTAGCAGGTAAGCATGCCAAAACGTCATA
ACTTGTACGTCGATGGTCTTCGGGGAGGGGGGCTGTAACAGTGACACCTA
TTAAACTCAGTTACTGAGATATAATCTCATCTACAATCAGAAAAGTAACG
TCAGTACGAAGTATATTTGGACCTAGGACGTACTTGTTTAACCACAATAT
TTCCCGTAAGATAATTTGAAATCGAGAAAATAGCGCTAGCCTGAGTGTCA
TCTTATTATTTTATCAATTATTTCAGATACAGACAAGGAGAGAAGCGGAA
AAGAAACTACCATGCCCACTGGTAGCACCAAACCAGGCACAGCCTCATTA
CTCGAAAGGGTACCTACTGGCTGAACTTCAAGGTGAATATTCAAGGTTAA
TATTTCCAGGGCTGATATGAGAACCTGGCGCATTCTATACTGAAATGTGT
GTTTTCTTGGGTTAGTATGACATTAATAAAATACAACATATAGTGTATTC
TGGTCTGCATCACCCTCAGTCCCAGCCCTCCCCCTGTTTGTAAACCGGGT
TACATTTAGCTAGCACATCAGATTAAAAATATACTAGATGCACATTCACA
AGATACTTTCACGTAGAAAAATCTGTGTCGTTCTAAACTTAGTTTCCGAG
TAGAGCTACGCGCTGTCGAACTCACTTGTGCTAGTGGGCAGCGATTACCA
AGTCTGTTTGCCTGACCAAGCCAACTGCGCCGTAGTCCACTCAGAAATGT
TGCGGTCTCAATCAGTCAATGATTGCTTAGAAATATATAGATTAAAATCA
TTGTTTATCAAATGTAACAGCACATCTTAATTGGTGATTTCTGGGCGTTT
CCTAACATCAAAGAGGTTTGATAGATAAAGCACTCAGAAGGAAGGCGTGC
TTGTCAAATATACACTTTAATGGAGCGGTGAACTTGGTTTATTGGAATGT
TAGGCCACAAATCGGACCGGAAGTGTATGCTGTCTCATTTTTATATTGTC
ACAGTCAGAAATCGGAAAATGCTTACAAAAAGATTACTATAGCCTAGTAT
AGGCTAGTAAATATTAAATGAGCCAGCAATAATTGTGACATTCTTGGGAC
TACAGTGGGCAAAGTGGGCTTGGTCAGGCGGGCGGACTTAAGGATTGCCG
CCGCCGGCTCGCACAGTTGGGTTCGGTGGTGCGCAGCTCAGTACATTAGC
CTGCTCGGAAAGTATGTATAGGATACTCTGATGCGGATTTTATCCGACAT
AAAGGTAGGTATATTCAGTGTACTTAGACAATGTATTTTAGCAATTGTAG
CAAGTCAGATTTCAGAAGGGGGCAACAACTGGGGGAGGGGGAAATCGACC
TGGGGGGAAACGTCTTTAACAAAGGAATGTTTGAAATATGTTGCAGGCAA
CCAGTAGCCAACCTTACAGACCAGCAGCCAACCATAGCGGACCTAATTCC
CCACTTAGGAGTGAGGTTGGATGTGGTTGGCTGTTGGTCTGCCAGGATCT
CAACCCAACATACCAGGTACCAGGTTCCCCGCTTCCATAGACTATGCAGA
GGCACGTCAGCTGCATTGAGAAGTGTACACATGCTTAGCCTTAGCACTTA
CCGGTATGTCTTGTTCAATTGATTTTATCAATTGCTTTGATCAATTGATT
TTATCAGTTGACTAGAAAGTGCATGTACTTGATGCTACAATGGTCCCCGG
CCCTCAGGCATGAGGATGGGACTAGGTACGGTAAGATACTAGAAACTAAA
TGTATTTTTGCTATAATGGTAAGATTCAGCTTAGCCCTCAACACGCCTAC
ATCATGTTCTACTTGATCTTAG Coding sequence (CDS) from alignment at Sc0000291:189758..192829- >transcript:BL81756_cuf4 ID=transcript:BL81756_cuf4|Name=transcript:BL81756_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=342bp|location=Sequence derived from alignment at Sc0000291:189758..192829- (Branchiostoma lanceolatum)
ATGTATTTTAGCAATTGTAGCAAGTCAGATTTCAGAAGGGGGCAACAACT
GGGGGAGGGGGAAATCGACCTGGGGGGAAACGTCTTTAACAAAGGAATGT
TTGAAATATGTTGCAGGCAACCAGTAGCCAACCTTACAGACCAGCAGCCA
ACCATAGCGGACCTAATTCCCCACTTAGGAGTGAGGTTGGATGTGGTTGG
CTGTTGGTCTGCCAGGATCTCAACCCAACATACCAGGTACCAGGTTCCCC
GCTTCCATAGACTATGCAGAGGCACGTCAGCTGCATTGAGAAGTGTACAC
ATGCTTAGCCTTAGCACTTACCGGTATGTCTTGTTCAATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000291 | genome | Sc0000291:189758..192829 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81756_cuf4 |
| Biotype | protein_coding |
|
