|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81620_cuf0 >transcript:BL81620_cuf0-protein ID=transcript:BL81620_cuf0-protein|Name=transcript:BL81620_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=176bp
HNMSRLVWGGLGVLFAAVGLGVYWTTMQMMSWLIWGSIGVLLGAVGLGVY
WSRDGFDPESIRGATVVITGCSSGIGEEMAYQYARLGAKILITARRENRL
KEVTFSFLLFPHRNIPTTIYVNFRRNNSAHFRLSNCLSGRILLKVVAKAE
SLGAQEAHYVAGDMGKAEDCERTIQT Run BLAST on NCBI mRNA from alignment at Sc0000382:56833..57996- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81620_cuf0 ID=transcript:BL81620_cuf0|Name=transcript:BL81620_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1164bp|location=Sequence derived from alignment at Sc0000382:56833..57996- (Branchiostoma lanceolatum)
CACAACATGTCCCGGCTAGTGTGGGGTGGTTTGGGTGTGCTGTTTGCTGC
TGTAGGCCTCGGTGTGTACTGGACTACAATGCAGATGATGTCGTGGCTGA
TTTGGGGCAGTATAGGTGTGCTGTTGGGTGCAGTAGGCCTCGGTGTGTAC
TGGAGCCGTGACGGCTTCGATCCAGGTAATGTTGCGTCAGGGGTTCCAGG
GGTTGAACGGGGCAAACGGCGCACCCGGAAGCTTCTCCTTTGTCGCGACA
GTGGGGGAGGGGGGCAAATGATGATCGAGCCACATTCATTGCCTTCATCA
TGATGCATTGCTTTTATATGCATTCCTCAGAAATTACAACGTAGCTGTAC
AGGGTCTGTTTATGCAGTGTATACACCACAACACAGTGTCACACCACAGT
GGTGTACTCGCACATCGGAGTCAGTATGTGACCCGAAAATATCATGACGA
GAGCACTGACATTTTTGGGTCACTAGCTAGTGGGGAAGGGTCAGGCGTCA
ATATCAGACAATCGATGCTGAACAAAGACTGCTATGGCAACAAGTAGGCA
ATCTGTGGATGATCTTAAACTGTGCAAACACCCATACTTGACACCAATGT
TAACAAGTTGTGTAAGATCATTGGTGACGGCTTTCACTTCCGGGTTGTGC
ATTTCGGCAATTGTACGCATTGCACCAAGCCTTGATTGCATTTGTGGCTA
TATTGGATTTTATAGGACTTGAAACAATTGAATTAAATATTTTGTGTGCT
CACAATGTATTGGTGTGTTGTACGCATCAAACCGTGCTCGTCTTTTATCT
ATTTAATAGAGTCTATCAGAGGAGCCACAGTCGTCATCACAGGCTGCAGT
TCCGGTATCGGGGAAGAGATGGCGTACCAGTACGCCCGGCTGGGGGCAAA
GATCCTCATCACAGCCAGGAGGGAGAACCGACTGAAGGAGGTGACGTTTT
CTTTCTTACTTTTCCCACATCGCAACATCCCTACAACAATCTATGTAAAT
TTTCGACGAAACAATAGCGCTCATTTCCGTCTCTCTAATTGTTTATCCGG
TCGGATTCTATTGAAGGTTGTCGCCAAGGCGGAGTCTCTGGGTGCCCAGG
AGGCGCACTACGTGGCCGGGGACATGGGGAAGGCGGAGGACTGTGAGAGA
ACCATTCAAACAGC Coding sequence (CDS) from alignment at Sc0000382:56833..57996- >transcript:BL81620_cuf0 ID=transcript:BL81620_cuf0|Name=transcript:BL81620_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1056bp|location=Sequence derived from alignment at Sc0000382:56833..57996- (Branchiostoma lanceolatum)
CACAACATGTCCCGGCTAGTGTGGGGTGGTTTGGGTGTGCTGTTTGCTGC
TGTAGGCCTCGGTGTGTACTGGACTACAATGCAGATGATGTCGTGGCTGA
TTTGGGGCAGTATAGGTGTGCTGTTGGGTGCAGTAGGCCTCGGTGTGTAC
TGGAGCCGTGACGGCTTCGATCCAGAGTCTATCAGAGGAGCCACAGTCGT
CATCACAGGCTGCAGTTCCGGTATCGGGGAAGAGATGGCGTACCAGTACG
CCCGGCTGGGGGCAAAGATCCTCATCACAGCCAGGAGGGAGAACCGACTG
AAGGAGGTGACGTTTTCTTTCTTACTTTTCCCACATCGCAACATCCCTAC
AACAATCTATGTAAATTTTCGACGAAACAATAGCGCTCATTTCCGTCTCT
CTAATTGTTTATCCGGTCGGATTCTATTGAAGGTTGTCGCCAAGGCGGAG
TCTCTGGGTGCCCAGGAGGCGCACTACGTGGCCGGGGACATGGGGAAGGC
GGAGGACTGTGAGAGAACCATTCAAACACACAACATGTCCCGGCTAGTGT
GGGGTGGTTTGGGTGTGCTGTTTGCTGCTGTAGGCCTCGGTGTGTACTGG
ACTACAATGCAGATGATGTCGTGGCTGATTTGGGGCAGTATAGGTGTGCT
GTTGGGTGCAGTAGGCCTCGGTGTGTACTGGAGCCGTGACGGCTTCGATC
CAGAGTCTATCAGAGGAGCCACAGTCGTCATCACAGGCTGCAGTTCCGGT
ATCGGGGAAGAGATGGCGTACCAGTACGCCCGGCTGGGGGCAAAGATCCT
CATCACAGCCAGGAGGGAGAACCGACTGAAGGAGGTGACGTTTTCTTTCT
TACTTTTCCCACATCGCAACATCCCTACAACAATCTATGTAAATTTTCGA
CGAAACAATAGCGCTCATTTCCGTCTCTCTAATTGTTTATCCGGTCGGAT
TCTATTGAAGGTTGTCGCCAAGGCGGAGTCTCTGGGTGCCCAGGAGGCGC
ACTACGTGGCCGGGGACATGGGGAAGGCGGAGGACTGTGAGAGAACCATT
CAAACA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000382 | genome | Sc0000382:56833..57996 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81620_cuf0 |
| Biotype | protein_coding |
|
