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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81604_cuf0 >transcript:BL81604_cuf0-protein ID=transcript:BL81604_cuf0-protein|Name=transcript:BL81604_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=463bp
IYYKNIADQTQKDRDEHVEDDVFTETIRLTDTNALKEITNENDDLFLWLK
FQAKKGVTDAQSAMARMLFWGQQGIKRNLQAAFRYYEMHAQQEPKNPEAL
YDYGIVMLKGQGTEKDVKKAMNTLNKSAELGSPAAINALGWYALNHEGNA
TKAAHYFHQADRKGNHDAAHNLGHLYWSGGYPGLKKPDRGKAFECYWRSA
QRGHIEGSIQSAMMFYNGYGLQERNAYNGAIWARFIAEMSPELGKTLRNG
LLAFRQKNWSKSLLFYLLAAEAGLEQGEFNMAYLCEENPEGLAESFIEKD
CKWKYYNLSTLAEWPSSYAQIKMGDFHWYGCGGKRDASAAVKMYAKAAVQ
QDPQGLYNLAYLVGEGVEIENMTLLKIGIDPVHKTSNVTLMSEFYSRCRE
SRNSDAFIPCSLALARVQLFDIWQKYEGFLKLSSVLGVAMVTSLTAFAAH
AHIRANRQDVDTV Run BLAST on NCBI mRNA from alignment at Sc0001227:4..2869+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81604_cuf0 ID=transcript:BL81604_cuf0|Name=transcript:BL81604_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2866bp|location=Sequence derived from alignment at Sc0001227:4..2869+ (Branchiostoma lanceolatum)
ATCTACTACAAGAACATCGCCGACCAGACGCAGAAGGATCGCGACGAACA
CGTCGAAGACGACGTCTTTACCGAGACTATCCGCCTCACCGACACCAACG
CTCTGAAGGAAATCACCAACGAAAACGACGACCTCTTCTTGTGGCTGAAG
TTCCAGGCTAAGAAGGGAGTCACCGACGCCCAGTCCGCCATGGCGCGCAT
GCTCTTCTGGGGACAGCAAGGCATCAAGCGTAACCTTCAAGCGGCCTTCC
GGTATTACGAAATGCACGCACAACAAGAACCTAAGAACCCAGAGGCTCTA
TACGACTACGGCATCGTCATGTTGAAGGGACAAGGCACCGAGAAAGACGT
GAAGAAAGCCATGAACACCTTAAACAAGTCCGCCGAGTTAGGAAGTCCTG
CCGCCATCAACGCTCTCGGCTGGTACGCGCTCAACCACGAGGGCAACGCT
ACCAAAGCGGCTCACTACTTCCACCAGGCCGACCGGAAGGGGAACCACGA
CGCGGCGCACAACCTCGGCCACCTGTACTGGTCGGGTGGCTACCCGGGTC
TGAAGAAACCCGACAGGGGCAAGGCGTTCGAGTGCTACTGGCGGTCTGCG
CAGAGAGGGCATATCGAGGGTTCCATCCAATCCGCCATGATGTTCTATAA
CGGGTACGGTCTGCAGGAGAGAAACGCGTACAACGGCGCCATCTGGGCTC
GCTTTATCGCAGAAATGAGTCCCGAACTTGGCAAGACTTTGCGCAACGGC
CTCCTAGCTTTCCGGCAGAAGAACTGGTCTAAATCCCTACTTTTCTACCT
CCTTGCAGCAGAGGCGGGCTTGGAACAGGGAGAATTCAACATGGCGTATC
TCTGCGAAGAAAACCCCGAAGGTCTAGCCGAAAGTTTCATCGAAAAGGAC
TGCAAGTGGAAATACTACAACCTGTCCACGCTAGCCGAGTGGCCGAGCTC
GTACGCGCAAATCAAGATGGGCGATTTCCATTGGTACGGATGCGGCGGCA
AACGCGACGCTTCGGCAGCGGTGAAAATGTACGCGAAGGCGGCGGTACAA
CAAGACCCCCAGGGTCTCTACAACCTGGCTTACCTAGTTGGGGAGGGGGT
AGAGATTGAAAACATGACACTTCTAAAAATAGGCATAGATCCAGTACACA
AGACAAGCAACGTCACTCTAATGTCGGAATTCTACAGCCGTTGCCGAGAG
TCACGGAATTCGGACGCCTTCATTCCATGTTCGCTGGCTCTGGCGAGAGT
CCAACTCTTCGACATTTGGCAAAAGTACGAGGGTTTCCTCAAACTGTCCA
GCGTTCTCGGCGTCGCCATGGTAACGTCGCTGACGGCCTTTGCCGCCCAT
GCCCATATAAGGGCAAACAGACAAGACGTAGATACGGTATGATAGCGCCC
TATAGGGGTTACAGACAATGGCAATTCTGAGACAAATCCAACAGGTAATT
GTGGAGGACAATGGATTGTTCTTTCAACTGAAAATACCTTAGAAAGTTAC
GATGAGAATCGTGAACATCAGTGAAAAGGCTTTTAAGATAGCTGACATTG
AAAAAAGTGGCCTTTTTGGTGACACCACAGGGACGAGCCGAATGGTTGTT
CTGAATGTATGGTACATACGATATTCCCGTAAAAGCATAAAATTATACGT
ACATGTATTGATGATAAAATGTCAGTCAGAAAGACTTCGGGCCAGGTGTA
ATAATTTTAGATCAATAATTTCTCAGGCCTCTAGAAGTGCAATATGTGAC
ATAATACATTAGAGAAGGTCTTCAAAACTTCAGAATTGTATGTAAATGAG
GTATATGAAGATGAACTAAAGATTTGCTTCCTCCTACATAAAGTTTTGAT
ATATAGAATATATCAGCAAAGTAAAAGATATATAAATCTATATATGTTTG
TTTGAAGCATAAAATGGGTGTTCAAAACATGCGTAGTATCTTGTCTCAGT
GTTTGAAAAGATCTCAGAAAAACTTGGGAAACAAAAATGTATTAGTCTAG
ATCTTCTAACGCAAGTCAGATTATGTTACAAAGTAAGACAGAGGAGTTGT
CCTTATTATCTTCTGTGCTTGAGATAGAAAAGAGAACTATCATGATAGAC
CATTCTTAGGTAAATGACATACAGATAAGGTCATGATGTCAATCCTAGTC
AAAATAGTCTAGATAGCCAACCTCTCCTCAAAATAGCAGACGTCTGAACA
TATCATCAGAGCAGACTAAGAAAATGACGAAATTACTTTGAAGCTAAATA
TTACAAAAACAGACCTTCAACCATCCTTGCTAGCCTCTACCAGGCCCCGC
GGATGCCTGGGAAAATAGTCGAAATTGCCCAAATGGAGTGAATAGTATGC
TAAGGGAGTCGGCTATGGAGAGAGGGTCAAACCCTGGCAAATATTCTCCC
TATAGCCGGTGTAGTTAGTCTGGTAGAGACTATGAATTTGCTGTGTCTTT
GAACAAACATAAGCAGTTCATAATGCATGTGTATTATTGGATAGGATGAA
CTTGAAGGTCTCAAGCATACGTTATGCTGACCATTTGTCAATTGGTCAAA
TGAGGCTTTTACTACTCAGTTTTAAAAATAAAGAAGAGGTTGATTTTTCT
TTCCAGTGAGTGAGCAAAATTCAATAATATATTGGTAGTGGCGATCTGTA
ACAGTTTATCTACTGGGTGAGATTAAAAAAGCACCTTAAACAGGTTTGAA
GTGGCTCTTGTTTATGTAGTGATGGGCATAGGTCTTGTGTTTCTGTAGCG
GAGGAACTCTTTTCGGATTCGATTACTCCGAGAGCAATATTAGTTAGATT
AAGTTGCAGGGAAAGCAATGGAGTTCCCTTGTCACGGTCTGTGATTTAAA
CAAAAGACAAAACAGG Coding sequence (CDS) from alignment at Sc0001227:4..2869+ >transcript:BL81604_cuf0 ID=transcript:BL81604_cuf0|Name=transcript:BL81604_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1392bp|location=Sequence derived from alignment at Sc0001227:4..2869+ (Branchiostoma lanceolatum)
ATCTACTACAAGAACATCGCCGACCAGACGCAGAAGGATCGCGACGAACA
CGTCGAAGACGACGTCTTTACCGAGACTATCCGCCTCACCGACACCAACG
CTCTGAAGGAAATCACCAACGAAAACGACGACCTCTTCTTGTGGCTGAAG
TTCCAGGCTAAGAAGGGAGTCACCGACGCCCAGTCCGCCATGGCGCGCAT
GCTCTTCTGGGGACAGCAAGGCATCAAGCGTAACCTTCAAGCGGCCTTCC
GGTATTACGAAATGCACGCACAACAAGAACCTAAGAACCCAGAGGCTCTA
TACGACTACGGCATCGTCATGTTGAAGGGACAAGGCACCGAGAAAGACGT
GAAGAAAGCCATGAACACCTTAAACAAGTCCGCCGAGTTAGGAAGTCCTG
CCGCCATCAACGCTCTCGGCTGGTACGCGCTCAACCACGAGGGCAACGCT
ACCAAAGCGGCTCACTACTTCCACCAGGCCGACCGGAAGGGGAACCACGA
CGCGGCGCACAACCTCGGCCACCTGTACTGGTCGGGTGGCTACCCGGGTC
TGAAGAAACCCGACAGGGGCAAGGCGTTCGAGTGCTACTGGCGGTCTGCG
CAGAGAGGGCATATCGAGGGTTCCATCCAATCCGCCATGATGTTCTATAA
CGGGTACGGTCTGCAGGAGAGAAACGCGTACAACGGCGCCATCTGGGCTC
GCTTTATCGCAGAAATGAGTCCCGAACTTGGCAAGACTTTGCGCAACGGC
CTCCTAGCTTTCCGGCAGAAGAACTGGTCTAAATCCCTACTTTTCTACCT
CCTTGCAGCAGAGGCGGGCTTGGAACAGGGAGAATTCAACATGGCGTATC
TCTGCGAAGAAAACCCCGAAGGTCTAGCCGAAAGTTTCATCGAAAAGGAC
TGCAAGTGGAAATACTACAACCTGTCCACGCTAGCCGAGTGGCCGAGCTC
GTACGCGCAAATCAAGATGGGCGATTTCCATTGGTACGGATGCGGCGGCA
AACGCGACGCTTCGGCAGCGGTGAAAATGTACGCGAAGGCGGCGGTACAA
CAAGACCCCCAGGGTCTCTACAACCTGGCTTACCTAGTTGGGGAGGGGGT
AGAGATTGAAAACATGACACTTCTAAAAATAGGCATAGATCCAGTACACA
AGACAAGCAACGTCACTCTAATGTCGGAATTCTACAGCCGTTGCCGAGAG
TCACGGAATTCGGACGCCTTCATTCCATGTTCGCTGGCTCTGGCGAGAGT
CCAACTCTTCGACATTTGGCAAAAGTACGAGGGTTTCCTCAAACTGTCCA
GCGTTCTCGGCGTCGCCATGGTAACGTCGCTGACGGCCTTTGCCGCCCAT
GCCCATATAAGGGCAAACAGACAAGACGTAGATACGGTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001227 | genome | Sc0001227:4..2869 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81604_cuf0 |
| Biotype | protein_coding |
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