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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81601_cuf0 >transcript:BL81601_cuf0-protein ID=transcript:BL81601_cuf0-protein|Name=transcript:BL81601_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=469bp
DIQCQDQSLSGAQNNENPAGKKSKISHQKARALANMTPYYCCLVCDPAPV
KPPDKLEATAFTQYRALTQHLREKHNIQSRFEHRFTIKKFPNVKTNTQEK
YQCQYCPIYYHMPGFLVKHLRDQHGVKDQIVKGSAHFEIVKPEIMEKMGS
GKVVKTGVHPNSSHGQTVTQYCCALCPKSATKDHKTRYAFLQFKTLEDHL
MTSHNVTSDFDKYCTSQQVPVLEISKHDVITYAKHRCKLCNAQYNYMGFI
VRHLNEKHDLKDLDMKWSDFVEVVTPEMKSFTQDSVQRDQSWKLFGQVGT
KANSEQQLVQEQHPRSTSAAKPVRNINLSPSSSAHDLSKRSESGHIIYQC
TLCKSFFRFYNNATDHLGNKHSKYGTDCAKHIKERSAKIVEFGRHKEQEN
LGSANQEVNDGRPSLTKKATVSDCDAGSKMANLPPESLGHSGGFGNEGDP
ADFSTLDISLLEADGVIYE Run BLAST on NCBI mRNA from alignment at Sc0001224:7571..8981+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81601_cuf0 ID=transcript:BL81601_cuf0|Name=transcript:BL81601_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1411bp|location=Sequence derived from alignment at Sc0001224:7571..8981+ (Branchiostoma lanceolatum)
CAGATATTCAGTGTCAAGATCAATCCTTAAGTGGAGCACAAAACAATGAA
AACCCTGCCGGAAAAAAGTCAAAGATATCGCATCAAAAGGCCAGAGCTCT
CGCTAACATGACACCCTATTATTGTTGCCTTGTCTGTGATCCTGCCCCAG
TTAAACCCCCTGATAAACTGGAGGCCACAGCTTTTACACAATACAGAGCA
CTCACGCAACACCTCCGAGAGAAACACAACATACAGTCAAGGTTTGAGCA
TCGCTTCACCATCAAGAAGTTCCCCAATGTAAAAACAAACACTCAGGAAA
AGTACCAGTGCCAGTACTGCCCCATCTACTATCACATGCCTGGGTTCTTG
GTAAAGCACCTTAGAGATCAACATGGGGTGAAGGACCAGATTGTCAAGGG
GAGCGCCCACTTTGAGATAGTCAAACCAGAAATTATGGAAAAAATGGGAA
GTGGAAAGGTGGTAAAAACAGGTGTCCATCCCAATTCTAGCCATGGACAG
ACAGTTACACAGTACTGTTGTGCACTCTGTCCAAAGTCTGCAACTAAAGA
CCACAAGACAAGGTATGCCTTCCTGCAGTTCAAGACTTTGGAGGACCATC
TCATGACCAGTCATAATGTGACGTCAGACTTTGACAAGTACTGCACCAGT
CAGCAGGTGCCAGTCCTGGAGATCAGCAAGCATGATGTCATCACATATGC
AAAGCACCGTTGCAAGCTGTGCAATGCCCAGTACAACTACATGGGCTTCA
TTGTCAGGCATCTGAACGAGAAACATGACTTGAAAGACTTAGATATGAAG
TGGTCCGACTTTGTTGAAGTTGTTACACCAGAAATGAAAAGCTTTACTCA
AGACAGTGTTCAGAGGGATCAATCATGGAAACTGTTTGGCCAAGTCGGCA
CCAAGGCAAACTCTGAACAACAGTTAGTACAAGAACAGCATCCAAGGAGT
ACTAGTGCTGCAAAGCCAGTAAGAAATATCAATTTGTCACCTTCATCTTC
TGCTCATGATCTAAGCAAGAGATCCGAAAGTGGCCACATCATCTATCAAT
GCACACTCTGTAAATCTTTCTTCCGTTTCTACAACAATGCAACTGACCAC
CTCGGGAACAAACACTCCAAGTATGGGACTGACTGTGCAAAACACATCAA
AGAGAGGAGTGCAAAAATAGTGGAATTTGGAAGACATAAGGAACAAGAAA
ACCTAGGCTCTGCAAATCAGGAGGTAAATGATGGTAGGCCAAGTCTAACC
AAGAAGGCAACTGTTTCTGATTGCGATGCAGGCAGTAAGATGGCCAACCT
TCCTCCAGAATCATTAGGTCATTCAGGAGGATTTGGTAATGAGGGTGACC
CAGCAGACTTCTCTACCTTAGACATTTCACTTTTAGAAGCAGACGGTGTC
ATCTATGAGTG Coding sequence (CDS) from alignment at Sc0001224:7571..8981+ >transcript:BL81601_cuf0 ID=transcript:BL81601_cuf0|Name=transcript:BL81601_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1407bp|location=Sequence derived from alignment at Sc0001224:7571..8981+ (Branchiostoma lanceolatum)
GATATTCAGTGTCAAGATCAATCCTTAAGTGGAGCACAAAACAATGAAAA
CCCTGCCGGAAAAAAGTCAAAGATATCGCATCAAAAGGCCAGAGCTCTCG
CTAACATGACACCCTATTATTGTTGCCTTGTCTGTGATCCTGCCCCAGTT
AAACCCCCTGATAAACTGGAGGCCACAGCTTTTACACAATACAGAGCACT
CACGCAACACCTCCGAGAGAAACACAACATACAGTCAAGGTTTGAGCATC
GCTTCACCATCAAGAAGTTCCCCAATGTAAAAACAAACACTCAGGAAAAG
TACCAGTGCCAGTACTGCCCCATCTACTATCACATGCCTGGGTTCTTGGT
AAAGCACCTTAGAGATCAACATGGGGTGAAGGACCAGATTGTCAAGGGGA
GCGCCCACTTTGAGATAGTCAAACCAGAAATTATGGAAAAAATGGGAAGT
GGAAAGGTGGTAAAAACAGGTGTCCATCCCAATTCTAGCCATGGACAGAC
AGTTACACAGTACTGTTGTGCACTCTGTCCAAAGTCTGCAACTAAAGACC
ACAAGACAAGGTATGCCTTCCTGCAGTTCAAGACTTTGGAGGACCATCTC
ATGACCAGTCATAATGTGACGTCAGACTTTGACAAGTACTGCACCAGTCA
GCAGGTGCCAGTCCTGGAGATCAGCAAGCATGATGTCATCACATATGCAA
AGCACCGTTGCAAGCTGTGCAATGCCCAGTACAACTACATGGGCTTCATT
GTCAGGCATCTGAACGAGAAACATGACTTGAAAGACTTAGATATGAAGTG
GTCCGACTTTGTTGAAGTTGTTACACCAGAAATGAAAAGCTTTACTCAAG
ACAGTGTTCAGAGGGATCAATCATGGAAACTGTTTGGCCAAGTCGGCACC
AAGGCAAACTCTGAACAACAGTTAGTACAAGAACAGCATCCAAGGAGTAC
TAGTGCTGCAAAGCCAGTAAGAAATATCAATTTGTCACCTTCATCTTCTG
CTCATGATCTAAGCAAGAGATCCGAAAGTGGCCACATCATCTATCAATGC
ACACTCTGTAAATCTTTCTTCCGTTTCTACAACAATGCAACTGACCACCT
CGGGAACAAACACTCCAAGTATGGGACTGACTGTGCAAAACACATCAAAG
AGAGGAGTGCAAAAATAGTGGAATTTGGAAGACATAAGGAACAAGAAAAC
CTAGGCTCTGCAAATCAGGAGGTAAATGATGGTAGGCCAAGTCTAACCAA
GAAGGCAACTGTTTCTGATTGCGATGCAGGCAGTAAGATGGCCAACCTTC
CTCCAGAATCATTAGGTCATTCAGGAGGATTTGGTAATGAGGGTGACCCA
GCAGACTTCTCTACCTTAGACATTTCACTTTTAGAAGCAGACGGTGTCAT
CTATGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001224 | genome | Sc0001224:7571..8981 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81601_cuf0 |
| Biotype | protein_coding |
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