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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81571_cuf0 >transcript:BL81571_cuf0-protein ID=transcript:BL81571_cuf0-protein|Name=transcript:BL81571_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=115bp
MFSYFQDRFSYKNTFLTSNENILLARIFFLLLRLIFLHQEYFSHFKGKDF
YCLEMFSYFQDQFSYKNTFLTSNENILLARIFFLLLRLIFLHQEYFSHFK
GKDFYCLEMFSYFQD Run BLAST on NCBI mRNA from alignment at Sc0000012:4237120..4239606+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81571_cuf0 ID=transcript:BL81571_cuf0|Name=transcript:BL81571_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2487bp|location=Sequence derived from alignment at Sc0000012:4237120..4239606+ (Branchiostoma lanceolatum)
TCACTACTAAAAATGGAAAAGAAATTTTTTCTTGTTTTTCTTCCACACAG
AAAATTTGTCTTCCAGGAAGAAAATTTTTCTGTGTCCAAGAAACCGTTCT
TGTCCATGGGGCAAGCAAATTTTTCTTGTTGCAATTTTTCTTGTATGTAG
ATTTGTTTTCTTATATTTCTTGCAGGAGTTGACTAAGTTACTTCTAGAAT
ATCATTCTTGAAGAGCTCAAACTTTCTCACTTCAAGTTCAAAATTCTAAC
TGCACGGAAATTGTTTCTTACTTTCAAGATTGATTTTCTTACACCAAGAT
TTCTTTTCTTACTCCAAGTGAAAACATTTTTATTGGCTAGAAATGTTTTC
TTACGTCCAAGATTTATTTTCTTACAACAAGAATACTTTTCTTACTTCAA
GTGAAAACATTTTTAATGCCTAGAAATGTTTTCTTACTTCCAAGATCGAT
TTTCTTACAAGAATACTTTTCTTACTTCAAACGAAAACATTTTATTAGCT
AGAATTTTTTTCTTACTTCTAAGATTAATATTCTTACACCAAGAATACTT
TTCTCACTTCAAGGGTAAAGATTTTTATTGCCTAGAAATGTTTTCTTACT
TCCAAGATCAATTTTCTTACAAGAATACTTTTCTTACTTCAAACGAAAAC
ATTTTATTAGCTAGAATTTTTTTCTTACTTCTAAGATTAATATTCTTACA
CCAAGAATACTTTTCTCACTTCAAGGGTAAAGATTTTTATTGCCTAGAAA
TGTTTTCTTACTTCCAAGATTAATGTTCTTACACCAAGAATACAATTCTT
ATTGCCTAGAAATGTTTTCTTACTTTCAAGATTAATGTTCTTACACCAAG
AATACAATTCTTATTGCCTAGAAATGTTTTCTTACTTTCAAGATTAATGT
TCTTACACCAAGAATACAATTCTTATTGCCTAGAAATGTTTTCTTACTTT
CAAGATGAATGTTCTTACACCAAGAATATAATTCTTATAAGTTATTGCCA
AGAAATGTTTTCTTACTTTCAAGATTAATTTTCTTACACCAAGAATACTT
TTCTCACATCAAGAGTTATTATGAAAATAATATGTTCTTGATGGATTCAT
TTTTCTCTAAAATTGTACATTATCACAACAGGAACTTGACATTGACAATC
TTTTACAGTACCTATTTTCTAAGAACTTAATAGTCACCTAGTTGATTCAC
AAATACAATTTTGCTGAGTACAGTAATAATAAAAATTACTGGTAGAACAT
AAGAAAGATTACAAACTGACATCTAACATGGCCGCCATATAGAATAATTA
CAGAATATCTTCAGAATCTGCTTTTTTCGTCTTGGTAGCCCGTTCAAAAG
GAAAGATTTTCCATCCCAATACATGTTGCATTGTCACTGGCAGGGCTACA
ATCTTCCGACATCTGAAAAAAGAAAGACTATATCATCAATTTGTACTTTC
AATAAATTAAATGAAGTTGTAGCAGAGTTCATAAATTTGTTTGTACATTG
GCTAAAGACTAAAAATCATTTACTAAGAAAAGAAGGTTCTTAACAATTAC
CTCATAAATATACATTGAAATTCTTTAAAACCTATCATTATACAAGTTTA
CCGTGCAGAAGCAGTACATTGCAAAGGACCACCCTGCAGTACAGAATGTG
GTCTTCCAATGACCTTGAGGTCATCTGCAAATTAGGTCATTTGTTAGCAA
AAAAATTGTTTTTCTTTAAATTAAATGAGCCAAAGCAGAAGCTACTAGTA
TACTCATCATGTTGCCTAATACTTGTTGCTTTAGATGGTTACAACTATCC
AAGGTTACATTTATCAAGGATTTTAAAAATAGAAGGAGTACATTTTTGTA
TAAACTGTTGGGGGAGGGGGGCACTGACCTTTTCCATGACTGCTTTCCAC
CGATTCTGTGCCAAACTTGGTTTCTGCATGCTGCAGCTGCTTGGTTCAGA
CCAAGATCTCCATTGTCTTCCTTGTTCCCTTGTACCTTGGTTCTGGCTTT
GAAACTAACATGAGCTTTCAATTGATACAGGCAGATCCACAAGTCAGAGC
AGCTGACCCATGGCTGCCTGCATGCAACTGAACTCATCTAACTGTCATTT
CACTGATATGAATGAACCAATCAGGAGTTAGAAAAAGATCACATGACAAG
TGTTATCATTGGTTGAATTATCTAGTAGTGGCATTTGCATCATTGATTCT
TGCGTTCTTGCCACATCACAGACACCATATTTTGAGAAGTGTTTTTTTTA
TGTACATCTAAAAAAATTGTTTAAAAGTTTGATATTCAAGCCAAGTTTAA
TATAGACTTTGAATTTTAAAGGCCGTGTTCAATGTATCTCTTAAACATTG
TCAAGAAAAACAAGAATGGTCTTTCTCAAACTTTCTGGATACAAAAAAAC
AAGAACATTTAAGAATATCAATCTAAGTCATGACTTTGTCTTTCAATTTG
AATATCCTAATTTTCTTGTATTTCTAGTATTATTTAT Coding sequence (CDS) from alignment at Sc0000012:4237120..4239606+ >transcript:BL81571_cuf0 ID=transcript:BL81571_cuf0|Name=transcript:BL81571_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=348bp|location=Sequence derived from alignment at Sc0000012:4237120..4239606+ (Branchiostoma lanceolatum)
ATGTTTTCTTACTTCCAAGATCGATTTTCTTACAAGAATACTTTTCTTAC
TTCAAACGAAAACATTTTATTAGCTAGAATTTTTTTCTTACTTCTAAGAT
TAATATTCTTACACCAAGAATACTTTTCTCACTTCAAGGGTAAAGATTTT
TATTGCCTAGAAATGTTTTCTTACTTCCAAGATCAATTTTCTTACAAGAA
TACTTTTCTTACTTCAAACGAAAACATTTTATTAGCTAGAATTTTTTTCT
TACTTCTAAGATTAATATTCTTACACCAAGAATACTTTTCTCACTTCAAG
GGTAAAGATTTTTATTGCCTAGAAATGTTTTCTTACTTCCAAGATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000012 | genome | Sc0000012:4237120..4239606 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81571_cuf0 |
| Biotype | protein_coding |
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