|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81550_cuf0 >transcript:BL81550_cuf0-protein ID=transcript:BL81550_cuf0-protein|Name=transcript:BL81550_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=350bp
KAFDCINRSKMFNILEAYGVPLDIVNAIAVMYRDTSAVVITPDGETDMFS
IDTGVLQGDPLAPFLFIICLDYALRNSISDTDGFTLRRRRSSRYPAEVLA
DIDFADDIGLLENSLLFAQILLNKVEVACQAIGLYLNPSKTKYMHLNPTS
SERLTTSDGSEIERVADFKYLGGYTDSGRDMECRIAQAWSSLHSLQKIWK
APIRKQTKTKVFKACTETILLYSSESWAMSAAQSKKLDGTYTRMLRMIYN
VSWRSHLTNKQLYGSLPHISSVVRRRRLALAGHVVRSNEPAGRLMMWLPE
GKRRVGRPHTTVMTMIERDTGLSGPELSSAMKDRLYWKTFIDGIPPDDSG Run BLAST on NCBI mRNA from alignment at Sc0000252:42095..43151- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81550_cuf0 ID=transcript:BL81550_cuf0|Name=transcript:BL81550_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1057bp|location=Sequence derived from alignment at Sc0000252:42095..43151- (Branchiostoma lanceolatum)
AAAGCTTTTGATTGTATCAATCGCAGCAAAATGTTTAATATTCTAGAGGC
ATATGGAGTTCCATTAGACATTGTTAATGCTATAGCTGTCATGTATAGAG
ACACATCTGCAGTAGTTATTACTCCAGATGGAGAGACTGATATGTTTAGC
ATTGACACTGGTGTACTGCAAGGGGACCCCCTGGCCCCGTTTCTATTCAT
TATATGTCTAGATTATGCTTTAAGGAACTCGATTTCAGACACAGATGGTT
TTACCCTCCGCCGTCGTCGTAGTAGTCGCTACCCTGCCGAAGTGCTTGCC
GACATTGATTTTGCTGATGACATTGGCCTTCTCGAAAACTCACTACTTTT
CGCACAAATCCTGCTTAACAAAGTAGAAGTGGCATGTCAGGCCATAGGCT
TATATCTAAACCCATCAAAAACGAAATACATGCATTTGAACCCTACATCT
TCCGAGCGACTTACTACATCTGACGGCTCTGAAATCGAGCGTGTAGCTGA
CTTCAAGTATTTAGGGGGCTATACTGACTCAGGGAGAGACATGGAGTGCA
GGATTGCTCAAGCTTGGAGCTCTCTCCATTCTCTACAAAAGATATGGAAA
GCTCCTATTAGGAAGCAAACAAAAACTAAAGTGTTTAAAGCCTGTACCGA
GACCATTCTACTTTATAGCTCTGAGTCATGGGCCATGAGTGCAGCCCAGA
GTAAGAAACTGGATGGTACATACACAAGAATGCTTAGAATGATATACAAT
GTATCATGGAGAAGTCATCTAACAAATAAGCAACTGTATGGCTCTCTGCC
ACATATTTCGTCAGTAGTGCGACGACGCCGGCTCGCCCTGGCGGGGCATG
TTGTTCGCAGTAACGAGCCTGCTGGGCGACTAATGATGTGGCTACCTGAG
GGAAAACGCAGAGTTGGAAGACCCCACACAACTGTAATGACAATGATTGA
AAGAGACACTGGACTGTCAGGTCCTGAGTTATCATCTGCCATGAAGGACA
GATTGTATTGGAAAACCTTTATCGATGGTATCCCACCGGATGATTCCGGA
TGAATAA Coding sequence (CDS) from alignment at Sc0000252:42095..43151- >transcript:BL81550_cuf0 ID=transcript:BL81550_cuf0|Name=transcript:BL81550_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1053bp|location=Sequence derived from alignment at Sc0000252:42095..43151- (Branchiostoma lanceolatum)
AAAGCTTTTGATTGTATCAATCGCAGCAAAATGTTTAATATTCTAGAGGC
ATATGGAGTTCCATTAGACATTGTTAATGCTATAGCTGTCATGTATAGAG
ACACATCTGCAGTAGTTATTACTCCAGATGGAGAGACTGATATGTTTAGC
ATTGACACTGGTGTACTGCAAGGGGACCCCCTGGCCCCGTTTCTATTCAT
TATATGTCTAGATTATGCTTTAAGGAACTCGATTTCAGACACAGATGGTT
TTACCCTCCGCCGTCGTCGTAGTAGTCGCTACCCTGCCGAAGTGCTTGCC
GACATTGATTTTGCTGATGACATTGGCCTTCTCGAAAACTCACTACTTTT
CGCACAAATCCTGCTTAACAAAGTAGAAGTGGCATGTCAGGCCATAGGCT
TATATCTAAACCCATCAAAAACGAAATACATGCATTTGAACCCTACATCT
TCCGAGCGACTTACTACATCTGACGGCTCTGAAATCGAGCGTGTAGCTGA
CTTCAAGTATTTAGGGGGCTATACTGACTCAGGGAGAGACATGGAGTGCA
GGATTGCTCAAGCTTGGAGCTCTCTCCATTCTCTACAAAAGATATGGAAA
GCTCCTATTAGGAAGCAAACAAAAACTAAAGTGTTTAAAGCCTGTACCGA
GACCATTCTACTTTATAGCTCTGAGTCATGGGCCATGAGTGCAGCCCAGA
GTAAGAAACTGGATGGTACATACACAAGAATGCTTAGAATGATATACAAT
GTATCATGGAGAAGTCATCTAACAAATAAGCAACTGTATGGCTCTCTGCC
ACATATTTCGTCAGTAGTGCGACGACGCCGGCTCGCCCTGGCGGGGCATG
TTGTTCGCAGTAACGAGCCTGCTGGGCGACTAATGATGTGGCTACCTGAG
GGAAAACGCAGAGTTGGAAGACCCCACACAACTGTAATGACAATGATTGA
AAGAGACACTGGACTGTCAGGTCCTGAGTTATCATCTGCCATGAAGGACA
GATTGTATTGGAAAACCTTTATCGATGGTATCCCACCGGATGATTCCGGA
TGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000252 | genome | Sc0000252:42095..43151 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81550_cuf0 |
| Biotype | protein_coding |
|
