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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81457_cuf0 >transcript:BL81457_cuf0-protein ID=transcript:BL81457_cuf0-protein|Name=transcript:BL81457_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=451bp
LIDLLLALQPIVVIVLWKYGDIAERIEKYEEKREKKEANKDQYYRRRRIS
YFVMITISLFFLLHCVECATCSFSSPTIFFGTLIRGVPKKFCPWLSLLFH
LVFPGYCLYCWYATKMACVLRRRADYIRKYIGERSSTIFHKSIDQPDILL
SNLNENIFHDDWHSEVWENISFLMNIMMFFSATLVLLYTHVYVSEVRLTL
GEWATHFMRLVSIATLSVTPYMHVAFACVRVTEAYSYVAESMSSAFQGSN
SHTSIQESHEASLDISQDPADLDSQTCSPSTQKKNGDGEKALERLEYLIQ
WQFLQTKVYKKCKDGLTSGILGSSYTTRSGVHLASLGVIIAMTWEVLDRL
NDFDVERAIRLGNTRQEAFIVTLFGILAFLLWISAATILLCYRLRPKICD
CTKCLAPLTVNRRLSVYIVLTILYFTIMYVSFYLVVYQDDYCYSSSNPLF
V Run BLAST on NCBI mRNA from alignment at Sc0000136:676749..679330+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81457_cuf0 ID=transcript:BL81457_cuf0|Name=transcript:BL81457_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2582bp|location=Sequence derived from alignment at Sc0000136:676749..679330+ (Branchiostoma lanceolatum)
TCTCATTGACCTCCTGCTAGCGTTACAACCGATCGTTGTAATAGTTCTCT
GGAAGTACGGAGATATTGCCGAGAGAATAGAGAAATACGAGGAAAAAAGG
GAAAAGAAAGAGGCCAACAAGGACCAATACTACCGCAGGCGTCGCATAAG
TTATTTTGTGATGATTACTATATCCCTGTTTTTCCTTCTTCACTGTGTAG
AGTGTGCAACCTGTTCCTTTTCTAGTCCAACCATTTTCTTTGGCACGTTG
ATTCGCGGTGTTCCCAAAAAGTTCTGCCCGTGGCTGAGCCTTCTGTTTCA
TCTTGTGTTCCCGGGATATTGTCTGTACTGTTGGTATGCCACCAAAATGG
CATGCGTGCTCCGTCGACGAGCTGACTACATCCGTAAATACATCGGCGAG
AGATCTTCGACCATTTTTCACAAAAGTATAGATCAGCCCGATATACTTCT
GAGTAACCTTAACGAAAACATTTTCCATGACGATTGGCACAGTGAAGTTT
GGGAGAACATTTCTTTCCTCATGAACATTATGATGTTCTTCAGCGCTACG
TTGGTATTGTTGTACACCCACGTGTATGTATCTGAAGTCCGCCTAACACT
AGGGGAGTGGGCAACTCACTTCATGCGACTTGTGTCAATAGCCACCCTTT
CCGTTACGCCATACATGCACGTTGCCTTTGCCTGCGTCCGTGTAACCGAA
GCCTATAGCTACGTAGCAGAGAGCATGAGTAGTGCTTTTCAAGGGTCAAA
CAGTCATACTTCGATCCAAGAATCACACGAAGCTTCCTTAGACATTTCGC
AAGACCCGGCTGACTTAGATAGTCAAACTTGTAGTCCAAGCACTCAGAAA
AAGAATGGAGACGGGGAAAAGGCGCTCGAACGACTAGAATATCTCATCCA
ATGGCAATTCTTACAGACTAAGGTGTACAAGAAGTGTAAAGATGGGCTTA
CATCTGGAATATTGGGTTCGTCGTACACTACTCGCAGCGGTGTCCACTTG
GCGTCGCTAGGCGTGATCATAGCTATGACATGGGAGGTTCTGGACCGTCT
CAATGATTTTGACGTGGAGAGAGCGATCAGACTTGGGAACACAAGACAGG
AAGCTTTCATTGTGACTCTCTTTGGCATTCTTGCTTTCCTACTCTGGATC
TCAGCTGCGACCATCCTTTTATGCTATCGTTTGAGGCCCAAGATATGCGA
TTGCACAAAGTGTCTTGCACCACTCACAGTTAATAGAAGACTAAGCGTGT
ACATAGTTCTTACAATACTGTACTTCACCATCATGTACGTGTCCTTCTAT
TTGGTCGTTTATCAGGATGACTACTGTTACAGTTCGTCCAACCCCCTGTT
CGTATAGTTATACCATAACTTTATTGCACAACAAATATTGTACAAGGTAC
AAAGTATGGCATTCACTGGTACATAGATAACATTCTATTAGGCTAATCAG
TCTATCTTATACAATATGGTGTAGTAGTATGGGATGACAATGGGATTTTA
CAATCATTGGAGGAGTTTCTAACGTCTAGACATTCTTTGATATACTTCCC
AATGTATACCATGCATGGGTTGCCACATGTCATTATGTACTTAAATTTGT
CCATTGAGATAAATCCTGGTAAATCCGACGATAGCATTGAGTATAGTGAA
TTACGTATATCAAAATATTTGGGACATACAATCAAAAAGTGATATTCGTC
TTCAACTACCTGTGGACAAAATGGACAAACCCTCTGGTCAATAGGAAGTT
TTTGAAATCTCCCCGTTTCTATACTTAGTTTATGACAGCCAATTGTGAGT
TTTGTGATTGCCCTACGTACGTCAAGGCTCTTAATGTTTGAAAGGTAATT
TTCTTGCTTATGATTCTTGTTTAAGGTAGAAAGAAAGAAAGTTTAGAATT
GTTTCGAATAGCGCAATGCCAATTTTGTATATAAATATCTTGTAGACGTT
GTCGTAGCTGAGTGTTGATTTTATCTATCTATAGAAGCTCCTATTTAAAA
AAAAACGTACCAGAACATGTGTTATCCTTGCTAACTCAAGATGGAAATTT
TAAGCAACAGACTTTTGAAACTTGAAAAAAAGAATGTCAAGGTTTTCCAA
GCAAGGCTACAGTCTACATTTCTGATCTGTTGTACATTCTCACATGATCC
ACATGTGTAAATAAAGATTGATAACTTTATTGCAAGTTCATGCACAGAGG
CTAATTGCGTATGCAGACAAACAAGTACATGGAGATACATGGAAATCGAA
ACAGTTATCTAGTCTACTGTGAAAGTTCTATGTTAACTATGGTTGACTAT
GGTTGGGTTTGACTTCTTTTTTTGAAGGCAGTGGAAAATGAAGTGACCCA
GGTTTTGTATCGTAAGTGGGTTTGTTGATTTTTGTAGAAAGATGGATTTT
TGTAAATTATTCAAATGGTGAAAGCTAGGAGAATTTATGGAAGCTATTGT
AAACATTAGCACAGTCAAGTGCTATATGGCACTATTCACTGACCTCCTCC
CTTGAACTCTTGAAAAACGGCCTCGGCCGAATGAGTGTATGTGTTTGCAT
ACTTTCAAGGTTAAATAAAGGTTGAAAAAAAA Coding sequence (CDS) from alignment at Sc0000136:676749..679330+ >transcript:BL81457_cuf0 ID=transcript:BL81457_cuf0|Name=transcript:BL81457_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1356bp|location=Sequence derived from alignment at Sc0000136:676749..679330+ (Branchiostoma lanceolatum)
CTCATTGACCTCCTGCTAGCGTTACAACCGATCGTTGTAATAGTTCTCTG
GAAGTACGGAGATATTGCCGAGAGAATAGAGAAATACGAGGAAAAAAGGG
AAAAGAAAGAGGCCAACAAGGACCAATACTACCGCAGGCGTCGCATAAGT
TATTTTGTGATGATTACTATATCCCTGTTTTTCCTTCTTCACTGTGTAGA
GTGTGCAACCTGTTCCTTTTCTAGTCCAACCATTTTCTTTGGCACGTTGA
TTCGCGGTGTTCCCAAAAAGTTCTGCCCGTGGCTGAGCCTTCTGTTTCAT
CTTGTGTTCCCGGGATATTGTCTGTACTGTTGGTATGCCACCAAAATGGC
ATGCGTGCTCCGTCGACGAGCTGACTACATCCGTAAATACATCGGCGAGA
GATCTTCGACCATTTTTCACAAAAGTATAGATCAGCCCGATATACTTCTG
AGTAACCTTAACGAAAACATTTTCCATGACGATTGGCACAGTGAAGTTTG
GGAGAACATTTCTTTCCTCATGAACATTATGATGTTCTTCAGCGCTACGT
TGGTATTGTTGTACACCCACGTGTATGTATCTGAAGTCCGCCTAACACTA
GGGGAGTGGGCAACTCACTTCATGCGACTTGTGTCAATAGCCACCCTTTC
CGTTACGCCATACATGCACGTTGCCTTTGCCTGCGTCCGTGTAACCGAAG
CCTATAGCTACGTAGCAGAGAGCATGAGTAGTGCTTTTCAAGGGTCAAAC
AGTCATACTTCGATCCAAGAATCACACGAAGCTTCCTTAGACATTTCGCA
AGACCCGGCTGACTTAGATAGTCAAACTTGTAGTCCAAGCACTCAGAAAA
AGAATGGAGACGGGGAAAAGGCGCTCGAACGACTAGAATATCTCATCCAA
TGGCAATTCTTACAGACTAAGGTGTACAAGAAGTGTAAAGATGGGCTTAC
ATCTGGAATATTGGGTTCGTCGTACACTACTCGCAGCGGTGTCCACTTGG
CGTCGCTAGGCGTGATCATAGCTATGACATGGGAGGTTCTGGACCGTCTC
AATGATTTTGACGTGGAGAGAGCGATCAGACTTGGGAACACAAGACAGGA
AGCTTTCATTGTGACTCTCTTTGGCATTCTTGCTTTCCTACTCTGGATCT
CAGCTGCGACCATCCTTTTATGCTATCGTTTGAGGCCCAAGATATGCGAT
TGCACAAAGTGTCTTGCACCACTCACAGTTAATAGAAGACTAAGCGTGTA
CATAGTTCTTACAATACTGTACTTCACCATCATGTACGTGTCCTTCTATT
TGGTCGTTTATCAGGATGACTACTGTTACAGTTCGTCCAACCCCCTGTTC
GTATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000136 | genome | Sc0000136:676749..679330 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81457_cuf0 |
| Biotype | protein_coding |
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