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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81377_cuf0 >transcript:BL81377_cuf0-protein ID=transcript:BL81377_cuf0-protein|Name=transcript:BL81377_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=140bp
MRLLTWQYEAMPDVLYQFLHSTASAHPVEWLRRQATIALEFYFPIHVEPR
GVSPPRAASPHPSDPSEPGTPRDVSPSRPPSPYRPQLFPETDSSASMSPR
STSPVSASSRSTERSTPTDEIDPYARTPSPVVQPAAPTAS Run BLAST on NCBI mRNA from alignment at Sc0000776:13214..14083- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81377_cuf0 ID=transcript:BL81377_cuf0|Name=transcript:BL81377_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=870bp|location=Sequence derived from alignment at Sc0000776:13214..14083- (Branchiostoma lanceolatum)
CGTCTGACGAGGCAGGCTGAACGGGCCCACTAGATTCCCACCCTGGAAAA
TCCCCAAGTATCAGCCCAGTTCAAACAATGGGCTTGGGATGGTCTGATGC
GGTTACTGACGTGGCAATATGGTAAGTACACACACACACACACACACACC
CACACACACCCCTAAAAAGAGAGAAATTTCATTTCCTTGTTGTAAAGTAC
GTATCATGCTTGCTGATTCTTTGTAATTCATCTTCGTGACTAGCAACACT
CCGGTATCCTACGCTGTTAGCCATTAAGTACTTCCATAACCCAGATTGAT
GTTATGTATTCTATAATTACAGAGGCAATGCCAGACGTTCTGTACCAGTT
TCTACATTCCACTGCCTCTGCACACCCTGTAGAGTGGCTACGCCGTCAGG
CTACTATAGCATTGGAATTCTATTTCCGTAAGTTGGATATCATAATTTCC
CCAATTCTAATTGCCTTATTATATCTGTAATACCTCACAGCTAGCACACA
GTCGTTTTCTTTCTAATTCCAATTGCACAAGTACAACAATATCCTGTGTT
AATACATCGTCGCTTCCTCCCTAATTCCAGCTATCCACGTAGAACCCAGG
GGTGTGTCACCGCCTAGAGCCGCATCCCCCCACCCAAGTGACCCCTCTGA
GCCGGGTACCCCCAGGGATGTGTCTCCGTCAAGGCCCCCATCCCCCTACC
GACCACAACTCTTCCCTGAGACGGATAGCTCCGCCTCAATGTCGCCCCGG
TCGACCAGTCCTGTCTCAGCCTCAAGCCGATCGACGGAAAGGTCTACCCC
CACCGATGAGATCGACCCATACGCCCGCACGCCTAGTCCTGTCGTCCAAC
CCGCGGCCCCGACAGCCAGC Coding sequence (CDS) from alignment at Sc0000776:13214..14083- >transcript:BL81377_cuf0 ID=transcript:BL81377_cuf0|Name=transcript:BL81377_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1260bp|location=Sequence derived from alignment at Sc0000776:13214..14083- (Branchiostoma lanceolatum)
ATGCGGTTACTGACGTGGCAATATGAGGCAATGCCAGACGTTCTGTACCA
GTTTCTACATTCCACTGCCTCTGCACACCCTGTAGAGTGGCTACGCCGTC
AGGCTACTATAGCATTGGAATTCTATTTCCCTATCCACGTAGAACCCAGG
GGTGTGTCACCGCCTAGAGCCGCATCCCCCCACCCAAGTGACCCCTCTGA
GCCGGGTACCCCCAGGGATGTGTCTCCGTCAAGGCCCCCATCCCCCTACC
GACCACAACTCTTCCCTGAGACGGATAGCTCCGCCTCAATGTCGCCCCGG
TCGACCAGTCCTGTCTCAGCCTCAAGCCGATCGACGGAAAGGTCTACCCC
CACCGATGAGATCGACCCATACGCCCGCACGCCTAGTCCTGTCGTCCAAC
CCGCGGCCCCGACAGCCAGCATGCGGTTACTGACGTGGCAATATGAGGCA
ATGCCAGACGTTCTGTACCAGTTTCTACATTCCACTGCCTCTGCACACCC
TGTAGAGTGGCTACGCCGTCAGGCTACTATAGCATTGGAATTCTATTTCC
CTATCCACGTAGAACCCAGGGGTGTGTCACCGCCTAGAGCCGCATCCCCC
CACCCAAGTGACCCCTCTGAGCCGGGTACCCCCAGGGATGTGTCTCCGTC
AAGGCCCCCATCCCCCTACCGACCACAACTCTTCCCTGAGACGGATAGCT
CCGCCTCAATGTCGCCCCGGTCGACCAGTCCTGTCTCAGCCTCAAGCCGA
TCGACGGAAAGGTCTACCCCCACCGATGAGATCGACCCATACGCCCGCAC
GCCTAGTCCTGTCGTCCAACCCGCGGCCCCGACAGCCAGCATGCGGTTAC
TGACGTGGCAATATGAGGCAATGCCAGACGTTCTGTACCAGTTTCTACAT
TCCACTGCCTCTGCACACCCTGTAGAGTGGCTACGCCGTCAGGCTACTAT
AGCATTGGAATTCTATTTCCCTATCCACGTAGAACCCAGGGGTGTGTCAC
CGCCTAGAGCCGCATCCCCCCACCCAAGTGACCCCTCTGAGCCGGGTACC
CCCAGGGATGTGTCTCCGTCAAGGCCCCCATCCCCCTACCGACCACAACT
CTTCCCTGAGACGGATAGCTCCGCCTCAATGTCGCCCCGGTCGACCAGTC
CTGTCTCAGCCTCAAGCCGATCGACGGAAAGGTCTACCCCCACCGATGAG
ATCGACCCATACGCCCGCACGCCTAGTCCTGTCGTCCAACCCGCGGCCCC
GACAGCCAGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000776 | genome | Sc0000776:13214..14083 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81377_cuf0 |
| Biotype | protein_coding |
|
