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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81056_cuf0 >transcript:BL81056_cuf0-protein ID=transcript:BL81056_cuf0-protein|Name=transcript:BL81056_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=366bp
REWFCSKFLFMSCSWLRTSLFPFVQLSVRDFDNFMGKNPPITSFFRQVIQ
YWLRFQLRPPEGVDEVKQQLLCLNSNICIGQKPFFSTAFDTGGVRFLNDI
LDLENRFLSYENFILKFGDMCTKLQYNQLISAIPAHWKALLKKASHILQV
CMPICRDTTWLRKKLINKHLYLFFINDDKVCEPSYRIQLSWEELFNTPIP
WRQVYCLPYKLTIDTYTRMFQFKTLFKFLTVNKTLYTWGLVDSPLCSLCH
EEEETTIHLFWNCRIVANFWAEVEGWFFNLTKINLHMNAFNTVLGDLSDR
CPVLSNLIILLGKCYIFRYRKIHVDLSGFISFVSYFQKLEFIIAQRKNKI
QKHIGKWGKLHIVLSS Run BLAST on NCBI mRNA from alignment at Sc0000001:3764615..3765890- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81056_cuf0 ID=transcript:BL81056_cuf0|Name=transcript:BL81056_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1276bp|location=Sequence derived from alignment at Sc0000001:3764615..3765890- (Branchiostoma lanceolatum)
AGAGAATGGTTCTGTTCCAAGTTTTTATTTATGTCTTGTTCATGGTTACG
GACTTCCTTGTTCCCCTTTGTACAACTTTCTGTCCGTGATTTTGATAATT
TTATGGGTAAGAATCCGCCAATAACTTCCTTTTTCAGACAGGTCATACAA
TATTGGTTGCGCTTCCAACTCCGACCCCCAGAGGGTGTGGACGAGGTCAA
ACAACAGCTTCTCTGTTTGAACTCGAATATATGTATTGGTCAAAAACCAT
TCTTTTCCACAGCTTTTGATACTGGGGGTGTTCGATTTCTTAATGATATA
TTGGATTTAGAAAATAGATTTCTTTCTTATGAAAATTTCATTCTAAAATT
TGGGGATATGTGTACAAAATTACAATACAATCAGTTAATTTCTGCTATAC
CAGCTCACTGGAAAGCATTACTAAAGAAAGCATCTCATATCTTACAAGTT
TGCATGCCCATTTGTAGAGACACAACTTGGCTTAGAAAAAAACTCATCAA
TAAACATTTGTACCTTTTTTTTATCAACGATGACAAGGTTTGTGAACCGT
CGTATAGAATACAACTGTCTTGGGAGGAACTTTTTAACACTCCTATCCCA
TGGAGACAAGTTTACTGCTTACCTTATAAGCTCACAATTGATACTTATAC
AAGGATGTTTCAGTTTAAGACGCTTTTTAAATTCTTAACAGTAAATAAAA
CACTATACACCTGGGGCCTGGTAGACTCCCCTCTATGTAGTCTGTGTCAT
GAAGAGGAGGAAACAACCATACATTTATTTTGGAATTGTAGAATTGTAGC
TAATTTCTGGGCTGAAGTGGAGGGTTGGTTTTTTAACTTGACAAAGATAA
ATTTACATATGAATGCTTTCAATACTGTCCTTGGTGATCTAAGCGACCGA
TGCCCTGTTCTGTCAAATCTTATTATTCTATTAGGTAAATGTTATATATT
TAGATATCGTAAAATACATGTTGATTTATCTGGTTTTATTTCATTTGTTT
CCTACTTTCAAAAATTAGAATTCATTATTGCCCAACGCAAAAATAAGATT
CAGAAACACATTGGGAAGTGGGGGAAACTACATATTGTTCTATCTAGTTA
ATTTCCGTTATTTTCCTGTACAATGATAGGGGTTCTCTCGGCATTTTATG
ATCATACTTTTTTGTTCCTGGATTTTAAGTTTCAGTTTTGTTGTCACACA
TGTGCCATTATTTTCTGTATGTTTGCCATGATTTTCTTTTTGTAAAATTT
ATGTTGGTCATAAACAATAAAAAGAC Coding sequence (CDS) from alignment at Sc0000001:3764615..3765890- >transcript:BL81056_cuf0 ID=transcript:BL81056_cuf0|Name=transcript:BL81056_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1101bp|location=Sequence derived from alignment at Sc0000001:3764615..3765890- (Branchiostoma lanceolatum)
AGAGAATGGTTCTGTTCCAAGTTTTTATTTATGTCTTGTTCATGGTTACG
GACTTCCTTGTTCCCCTTTGTACAACTTTCTGTCCGTGATTTTGATAATT
TTATGGGTAAGAATCCGCCAATAACTTCCTTTTTCAGACAGGTCATACAA
TATTGGTTGCGCTTCCAACTCCGACCCCCAGAGGGTGTGGACGAGGTCAA
ACAACAGCTTCTCTGTTTGAACTCGAATATATGTATTGGTCAAAAACCAT
TCTTTTCCACAGCTTTTGATACTGGGGGTGTTCGATTTCTTAATGATATA
TTGGATTTAGAAAATAGATTTCTTTCTTATGAAAATTTCATTCTAAAATT
TGGGGATATGTGTACAAAATTACAATACAATCAGTTAATTTCTGCTATAC
CAGCTCACTGGAAAGCATTACTAAAGAAAGCATCTCATATCTTACAAGTT
TGCATGCCCATTTGTAGAGACACAACTTGGCTTAGAAAAAAACTCATCAA
TAAACATTTGTACCTTTTTTTTATCAACGATGACAAGGTTTGTGAACCGT
CGTATAGAATACAACTGTCTTGGGAGGAACTTTTTAACACTCCTATCCCA
TGGAGACAAGTTTACTGCTTACCTTATAAGCTCACAATTGATACTTATAC
AAGGATGTTTCAGTTTAAGACGCTTTTTAAATTCTTAACAGTAAATAAAA
CACTATACACCTGGGGCCTGGTAGACTCCCCTCTATGTAGTCTGTGTCAT
GAAGAGGAGGAAACAACCATACATTTATTTTGGAATTGTAGAATTGTAGC
TAATTTCTGGGCTGAAGTGGAGGGTTGGTTTTTTAACTTGACAAAGATAA
ATTTACATATGAATGCTTTCAATACTGTCCTTGGTGATCTAAGCGACCGA
TGCCCTGTTCTGTCAAATCTTATTATTCTATTAGGTAAATGTTATATATT
TAGATATCGTAAAATACATGTTGATTTATCTGGTTTTATTTCATTTGTTT
CCTACTTTCAAAAATTAGAATTCATTATTGCCCAACGCAAAAATAAGATT
CAGAAACACATTGGGAAGTGGGGGAAACTACATATTGTTCTATCTAGTTA
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:3764615..3765890 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81056_cuf0 |
| Biotype | protein_coding |
|
