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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80895_cuf0 >transcript:BL80895_cuf0-protein ID=transcript:BL80895_cuf0-protein|Name=transcript:BL80895_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=405bp
TPKYHRVENKVAKREIRPMKDSGIRSFGQWITQHQWKEVTEAQKTQDKTS
AFYTTLNEAVATHFPTKVLRTHLQDKPWISPRIKEAIKRRQRAFCDQKWK
TWRALCNKIQRMIKRARNQYYTSRVQKLKKDNPSAWYKEIKVLTGTQKKA
MTVQAEGVDPDNHHDMANFINQKFTDVTTSLPPLDLSNLPTYLPSRPPPT
VQPWDVYWKLCKIKTTKSAGPDGIDGRLLKEYAVELSEPIANILNSSLLE
GRVPHEWKEAVVVPLPKTSPPDINHLRPVSLTSLISKVCEDFVATWMLQD
TKNSISPNQFGGLKGRSTTHCLITLANQLYEAADKRGTSSTWVLTDFSKA
FDLVDHTVAMKHLINLGVRPEIIPWIVSFHSQRSQRTRYHGALSKKKELT
CGLAQ Run BLAST on NCBI mRNA from alignment at Sc0000227:27701..28918- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80895_cuf0 ID=transcript:BL80895_cuf0|Name=transcript:BL80895_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1218bp|location=Sequence derived from alignment at Sc0000227:27701..28918- (Branchiostoma lanceolatum)
TGACGCCAAAGTACCACCGGGTCGAGAACAAGGTCGCAAAACGGGAGATA
CGGCCAATGAAAGACTCCGGTATTCGGTCATTCGGCCAATGGATCACCCA
GCACCAGTGGAAGGAAGTAACAGAGGCACAGAAAACACAAGACAAAACAT
CAGCCTTCTATACAACGTTGAACGAGGCAGTAGCAACACACTTTCCCACT
AAAGTACTAAGAACACACCTGCAGGACAAGCCCTGGATTTCCCCAAGAAT
AAAGGAAGCAATCAAAAGGCGACAGCGAGCATTCTGCGATCAAAAGTGGA
AAACATGGAGGGCACTTTGCAATAAGATCCAGAGGATGATCAAAAGGGCC
AGGAATCAATACTACACCAGCAGAGTCCAGAAACTGAAGAAAGACAACCC
GAGCGCTTGGTACAAGGAGATAAAGGTTTTAACAGGCACACAGAAAAAAG
CCATGACCGTCCAAGCCGAAGGGGTCGATCCAGACAATCATCACGACATG
GCAAATTTCATCAACCAGAAATTTACCGACGTAACAACATCACTACCACC
CCTCGACCTGTCTAACTTACCAACGTATCTCCCAAGCCGTCCCCCTCCAA
CAGTGCAGCCTTGGGATGTGTACTGGAAACTGTGCAAGATCAAAACAACA
AAATCTGCAGGCCCTGACGGAATTGACGGTAGGTTGCTCAAGGAATACGC
AGTCGAACTGAGTGAACCTATTGCCAACATCTTAAACTCCTCTTTGCTTG
AAGGTAGGGTGCCACACGAGTGGAAAGAGGCAGTGGTGGTACCGCTCCCG
AAGACTAGTCCACCAGACATCAACCACCTACGACCCGTTTCGCTAACCTC
CCTCATCTCAAAAGTATGTGAGGACTTCGTGGCAACTTGGATGCTGCAGG
ATACGAAGAACAGTATCTCTCCAAACCAGTTTGGGGGGCTCAAGGGGCGA
TCAACAACGCATTGTCTTATCACTTTGGCTAATCAACTCTATGAGGCAGC
AGACAAACGAGGAACTTCCAGCACTTGGGTATTGACGGATTTTAGCAAAG
CTTTCGACCTAGTGGATCATACAGTAGCAATGAAGCACCTGATCAACCTG
GGAGTCAGGCCAGAAATTATCCCCTGGATTGTCAGTTTCCACTCACAACG
CTCGCAGAGAACCAGATACCATGGTGCGCTTTCCAAGAAGAAGGAACTCA
CGTGCGGGCTCGCTCAAG Coding sequence (CDS) from alignment at Sc0000227:27701..28918- >transcript:BL80895_cuf0 ID=transcript:BL80895_cuf0|Name=transcript:BL80895_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1215bp|location=Sequence derived from alignment at Sc0000227:27701..28918- (Branchiostoma lanceolatum)
ACGCCAAAGTACCACCGGGTCGAGAACAAGGTCGCAAAACGGGAGATACG
GCCAATGAAAGACTCCGGTATTCGGTCATTCGGCCAATGGATCACCCAGC
ACCAGTGGAAGGAAGTAACAGAGGCACAGAAAACACAAGACAAAACATCA
GCCTTCTATACAACGTTGAACGAGGCAGTAGCAACACACTTTCCCACTAA
AGTACTAAGAACACACCTGCAGGACAAGCCCTGGATTTCCCCAAGAATAA
AGGAAGCAATCAAAAGGCGACAGCGAGCATTCTGCGATCAAAAGTGGAAA
ACATGGAGGGCACTTTGCAATAAGATCCAGAGGATGATCAAAAGGGCCAG
GAATCAATACTACACCAGCAGAGTCCAGAAACTGAAGAAAGACAACCCGA
GCGCTTGGTACAAGGAGATAAAGGTTTTAACAGGCACACAGAAAAAAGCC
ATGACCGTCCAAGCCGAAGGGGTCGATCCAGACAATCATCACGACATGGC
AAATTTCATCAACCAGAAATTTACCGACGTAACAACATCACTACCACCCC
TCGACCTGTCTAACTTACCAACGTATCTCCCAAGCCGTCCCCCTCCAACA
GTGCAGCCTTGGGATGTGTACTGGAAACTGTGCAAGATCAAAACAACAAA
ATCTGCAGGCCCTGACGGAATTGACGGTAGGTTGCTCAAGGAATACGCAG
TCGAACTGAGTGAACCTATTGCCAACATCTTAAACTCCTCTTTGCTTGAA
GGTAGGGTGCCACACGAGTGGAAAGAGGCAGTGGTGGTACCGCTCCCGAA
GACTAGTCCACCAGACATCAACCACCTACGACCCGTTTCGCTAACCTCCC
TCATCTCAAAAGTATGTGAGGACTTCGTGGCAACTTGGATGCTGCAGGAT
ACGAAGAACAGTATCTCTCCAAACCAGTTTGGGGGGCTCAAGGGGCGATC
AACAACGCATTGTCTTATCACTTTGGCTAATCAACTCTATGAGGCAGCAG
ACAAACGAGGAACTTCCAGCACTTGGGTATTGACGGATTTTAGCAAAGCT
TTCGACCTAGTGGATCATACAGTAGCAATGAAGCACCTGATCAACCTGGG
AGTCAGGCCAGAAATTATCCCCTGGATTGTCAGTTTCCACTCACAACGCT
CGCAGAGAACCAGATACCATGGTGCGCTTTCCAAGAAGAAGGAACTCACG
TGCGGGCTCGCTCAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000227 | genome | Sc0000227:27701..28918 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80895_cuf0 |
| Biotype | protein_coding |
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