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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80882_cuf0 >transcript:BL80882_cuf0-protein ID=transcript:BL80882_cuf0-protein|Name=transcript:BL80882_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=429bp
NFDAPMLNTSCVSSLFYADDLVMLSTSKHGLQNAINTLGLYCNKWKLSVN
LTKTKILVFNKKGYMFSNLKFHLLNKDIEIVSSYCYLGVVFTTGCNFTTA
IKTLQKKALRALFSIKTTLGDSNPSISVYCKLFDACVVPILTYGAEVWGN
CKTGLNDKSPTEQIHLKFCKSILGVRKNASNLATRAELGRYPLWIEVCIR
LYSYYKRLVREVPPNSLQFESFLVQQDMHRRKLPCWLSSVSRILEESGFA
YLLLNRDSNTSSAQSEVKQRLKDIYVQSFYSELNSSGKKENQGNKLRTYK
TFKHTYEREKYLDITNFNHRRAMTKLRISDHLLHIEAGRYNRTPPSDRLC
IFCNENYIENEVHFVLECSLYKDIRNSPVSDILLDRRYAHLTKEEMFAHV
MSTANYDVMKKLCEFVYKCFKKREEACKS Run BLAST on NCBI mRNA from alignment at Sc0000111:620021..621323+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80882_cuf0 ID=transcript:BL80882_cuf0|Name=transcript:BL80882_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1303bp|location=Sequence derived from alignment at Sc0000111:620021..621323+ (Branchiostoma lanceolatum)
GAAACTTCGATGCGCCCATGCTAAATACATCATGCGTATCCAGTCTATTT
TACGCTGATGACCTTGTGATGCTATCAACAAGCAAACATGGTCTACAAAA
TGCAATAAATACTTTAGGCCTTTACTGTAACAAATGGAAATTATCGGTAA
ATCTTACCAAAACAAAAATACTTGTATTCAATAAAAAGGGATATATGTTT
TCAAATCTAAAATTCCATCTACTCAACAAAGACATAGAGATAGTTTCCTC
GTATTGCTATCTGGGAGTGGTATTTACAACTGGTTGTAACTTTACAACAG
CAATAAAAACATTACAAAAGAAAGCTTTAAGGGCATTGTTCAGTATAAAA
ACAACATTAGGAGACAGCAACCCCTCAATCTCCGTATACTGCAAACTATT
TGATGCCTGTGTAGTGCCAATTCTAACTTATGGTGCCGAGGTGTGGGGCA
ATTGCAAGACTGGACTAAACGACAAGTCCCCAACTGAACAAATTCATCTT
AAGTTTTGTAAATCAATCCTAGGCGTGAGAAAGAATGCGAGCAACCTGGC
AACGAGGGCAGAACTCGGCAGGTACCCACTATGGATTGAAGTATGTATTA
GACTTTACTCGTACTACAAAAGGTTAGTTAGAGAAGTACCCCCAAACAGT
CTTCAGTTTGAGTCCTTTCTAGTTCAACAAGACATGCACCGACGCAAGTT
GCCATGTTGGCTGTCCTCTGTTAGTAGAATCCTTGAGGAGTCAGGCTTTG
CCTACCTTCTACTTAACAGGGACAGTAATACATCATCTGCTCAGTCTGAA
GTAAAACAAAGACTAAAAGATATCTATGTGCAAAGTTTTTACTCAGAACT
GAACTCCAGTGGCAAAAAAGAGAACCAAGGTAATAAACTAAGAACCTACA
AAACATTTAAACATACATATGAAAGAGAGAAATATCTTGATATAACAAAC
TTTAACCATCGCCGCGCCATGACTAAGCTAAGGATTAGCGATCACTTACT
ACATATTGAAGCTGGTAGATATAACCGGACTCCTCCTAGTGACAGACTGT
GTATATTTTGTAATGAGAACTATATAGAAAATGAAGTACACTTTGTTCTA
GAATGCTCTCTTTATAAAGATATACGCAATTCTCCTGTTAGTGACATATT
GCTAGACCGAAGATATGCACATTTAACAAAGGAGGAAATGTTCGCACATG
TTATGTCAACAGCCAATTACGATGTAATGAAAAAACTCTGTGAATTTGTC
TACAAATGTTTCAAGAAGAGAGAAGAAGCATGTAAATCATAATTAAAGCA
TAG Coding sequence (CDS) from alignment at Sc0000111:620021..621323+ >transcript:BL80882_cuf0 ID=transcript:BL80882_cuf0|Name=transcript:BL80882_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1290bp|location=Sequence derived from alignment at Sc0000111:620021..621323+ (Branchiostoma lanceolatum)
AACTTCGATGCGCCCATGCTAAATACATCATGCGTATCCAGTCTATTTTA
CGCTGATGACCTTGTGATGCTATCAACAAGCAAACATGGTCTACAAAATG
CAATAAATACTTTAGGCCTTTACTGTAACAAATGGAAATTATCGGTAAAT
CTTACCAAAACAAAAATACTTGTATTCAATAAAAAGGGATATATGTTTTC
AAATCTAAAATTCCATCTACTCAACAAAGACATAGAGATAGTTTCCTCGT
ATTGCTATCTGGGAGTGGTATTTACAACTGGTTGTAACTTTACAACAGCA
ATAAAAACATTACAAAAGAAAGCTTTAAGGGCATTGTTCAGTATAAAAAC
AACATTAGGAGACAGCAACCCCTCAATCTCCGTATACTGCAAACTATTTG
ATGCCTGTGTAGTGCCAATTCTAACTTATGGTGCCGAGGTGTGGGGCAAT
TGCAAGACTGGACTAAACGACAAGTCCCCAACTGAACAAATTCATCTTAA
GTTTTGTAAATCAATCCTAGGCGTGAGAAAGAATGCGAGCAACCTGGCAA
CGAGGGCAGAACTCGGCAGGTACCCACTATGGATTGAAGTATGTATTAGA
CTTTACTCGTACTACAAAAGGTTAGTTAGAGAAGTACCCCCAAACAGTCT
TCAGTTTGAGTCCTTTCTAGTTCAACAAGACATGCACCGACGCAAGTTGC
CATGTTGGCTGTCCTCTGTTAGTAGAATCCTTGAGGAGTCAGGCTTTGCC
TACCTTCTACTTAACAGGGACAGTAATACATCATCTGCTCAGTCTGAAGT
AAAACAAAGACTAAAAGATATCTATGTGCAAAGTTTTTACTCAGAACTGA
ACTCCAGTGGCAAAAAAGAGAACCAAGGTAATAAACTAAGAACCTACAAA
ACATTTAAACATACATATGAAAGAGAGAAATATCTTGATATAACAAACTT
TAACCATCGCCGCGCCATGACTAAGCTAAGGATTAGCGATCACTTACTAC
ATATTGAAGCTGGTAGATATAACCGGACTCCTCCTAGTGACAGACTGTGT
ATATTTTGTAATGAGAACTATATAGAAAATGAAGTACACTTTGTTCTAGA
ATGCTCTCTTTATAAAGATATACGCAATTCTCCTGTTAGTGACATATTGC
TAGACCGAAGATATGCACATTTAACAAAGGAGGAAATGTTCGCACATGTT
ATGTCAACAGCCAATTACGATGTAATGAAAAAACTCTGTGAATTTGTCTA
CAAATGTTTCAAGAAGAGAGAAGAAGCATGTAAATCATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000111 | genome | Sc0000111:620021..621323 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80882_cuf0 |
| Biotype | protein_coding |
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