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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80880_cuf0 >transcript:BL80880_cuf0-protein ID=transcript:BL80880_cuf0-protein|Name=transcript:BL80880_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=240bp
FGKDLTDLCSQSDLRILNGRILGDLSGRFTCYQPSGCSTVDYAIASSPLF
HKISIFRVHQLTEFSDHCMISLNIDRFLQQPQNEISTKTSMRPFPDRFVW
GPDSHEKFTIALGSQTITDKLEKFMALSDEVPEVSLDIDKEVHEFQEIIE
MAGKMSLLVKHKRKRKALRTNKKWFNKNCYEIRSELRNLQYLLQRNPKNP
FIRGSYFRKKKEYNKLIRRRKKEYETDCLMQLQNLQNSNP Run BLAST on NCBI mRNA from alignment at Sc0000111:618398..619121+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80880_cuf0 ID=transcript:BL80880_cuf0|Name=transcript:BL80880_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=724bp|location=Sequence derived from alignment at Sc0000111:618398..619121+ (Branchiostoma lanceolatum)
CTTTTGGCAAAGATCTGACTGACCTATGCTCGCAATCTGACCTCCGCATA
TTAAATGGGCGAATCCTGGGAGATTTGAGCGGCCGATTCACGTGCTATCA
GCCCAGTGGCTGTAGCACAGTGGATTATGCTATAGCTAGCAGTCCCCTCT
TCCACAAGATTAGCATATTTAGAGTACATCAATTGACAGAATTTTCGGAC
CATTGTATGATTTCACTAAATATTGATAGATTTTTACAACAACCTCAAAA
CGAAATATCGACAAAAACTAGTATGCGGCCTTTCCCAGACAGATTTGTAT
GGGGACCAGACTCTCACGAAAAGTTTACAATTGCTTTAGGCAGTCAGACA
ATAACAGATAAGCTTGAAAAGTTCATGGCGTTAAGCGATGAAGTCCCTGA
AGTAAGTCTAGACATCGACAAAGAGGTTCACGAATTCCAGGAAATCATAG
AAATGGCGGGGAAAATGTCACTACTGGTAAAGCATAAAAGGAAACGAAAA
GCATTGAGAACGAACAAAAAATGGTTCAACAAAAATTGCTACGAGATTCG
GAGTGAACTGCGAAATCTTCAATACTTGCTTCAGCGAAACCCAAAGAACC
CTTTTATTAGAGGTAGCTACTTTAGGAAGAAAAAAGAATATAACAAACTA
ATTCGAAGGCGCAAAAAGGAATACGAAACAGATTGTTTAATGCAACTGCA
AAATCTTCAAAATAGCAACCCTAC Coding sequence (CDS) from alignment at Sc0000111:618398..619121+ >transcript:BL80880_cuf0 ID=transcript:BL80880_cuf0|Name=transcript:BL80880_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=720bp|location=Sequence derived from alignment at Sc0000111:618398..619121+ (Branchiostoma lanceolatum)
TTTGGCAAAGATCTGACTGACCTATGCTCGCAATCTGACCTCCGCATATT
AAATGGGCGAATCCTGGGAGATTTGAGCGGCCGATTCACGTGCTATCAGC
CCAGTGGCTGTAGCACAGTGGATTATGCTATAGCTAGCAGTCCCCTCTTC
CACAAGATTAGCATATTTAGAGTACATCAATTGACAGAATTTTCGGACCA
TTGTATGATTTCACTAAATATTGATAGATTTTTACAACAACCTCAAAACG
AAATATCGACAAAAACTAGTATGCGGCCTTTCCCAGACAGATTTGTATGG
GGACCAGACTCTCACGAAAAGTTTACAATTGCTTTAGGCAGTCAGACAAT
AACAGATAAGCTTGAAAAGTTCATGGCGTTAAGCGATGAAGTCCCTGAAG
TAAGTCTAGACATCGACAAAGAGGTTCACGAATTCCAGGAAATCATAGAA
ATGGCGGGGAAAATGTCACTACTGGTAAAGCATAAAAGGAAACGAAAAGC
ATTGAGAACGAACAAAAAATGGTTCAACAAAAATTGCTACGAGATTCGGA
GTGAACTGCGAAATCTTCAATACTTGCTTCAGCGAAACCCAAAGAACCCT
TTTATTAGAGGTAGCTACTTTAGGAAGAAAAAAGAATATAACAAACTAAT
TCGAAGGCGCAAAAAGGAATACGAAACAGATTGTTTAATGCAACTGCAAA
ATCTTCAAAATAGCAACCCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000111 | genome | Sc0000111:618398..619121 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80880_cuf0 |
| Biotype | protein_coding |
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