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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80866_cuf0 >transcript:BL80866_cuf0-protein ID=transcript:BL80866_cuf0-protein|Name=transcript:BL80866_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=289bp
NGVEKMLQGLNPSKASGPDQIPPWFLKMTATEIAPVLTNIFQHSLDTGEI
PKDWRDANICAIFKKGDRAVPGNYRPVSLTCISCKLLEHIIHSHVMKHLE
SFNILTDYQHGFRAKRSTETQLILTAHDIAGALNSKKQVDLAILDFTKAF
DKVPHSRLITKLEHYGIQGTTLNWLKAFLTNREQTVVVEGKASAPVRVAS
GVPQGTVLGPLLFLLYINDLPDQLDSNVRLFADDCLLYIELSTQSDSQLL
QEDLNTLEEWQSRWLMQFNPEKCYIMHITNKRNPIVTTY Run BLAST on NCBI mRNA from alignment at Sc0000535:2100..2967- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80866_cuf0 ID=transcript:BL80866_cuf0|Name=transcript:BL80866_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=868bp|location=Sequence derived from alignment at Sc0000535:2100..2967- (Branchiostoma lanceolatum)
TAATGGTGTCGAAAAAATGCTCCAAGGTCTCAATCCATCTAAAGCATCTG
GTCCAGACCAAATACCTCCTTGGTTCCTCAAAATGACAGCCACCGAAATA
GCACCTGTGTTAACCAATATTTTCCAACACTCGTTAGACACAGGAGAAAT
TCCCAAAGACTGGAGGGATGCAAATATATGTGCCATTTTTAAAAAGGGAG
ATAGAGCTGTCCCCGGCAACTACCGACCTGTATCACTGACCTGTATATCC
TGCAAACTACTTGAACACATTATCCATAGTCATGTCATGAAACACTTAGA
AAGTTTCAACATATTGACTGACTACCAACATGGATTCAGAGCAAAGCGAT
CCACAGAAACACAGCTTATATTGACAGCTCACGACATAGCTGGCGCACTG
AACAGTAAAAAACAGGTAGATCTAGCAATTCTTGATTTTACTAAAGCTTT
CGATAAAGTCCCACATAGCAGACTCATCACTAAACTAGAGCACTACGGAA
TTCAAGGCACCACACTAAATTGGTTGAAGGCTTTCTTGACCAATAGGGAA
CAGACGGTAGTGGTAGAAGGCAAGGCCTCAGCTCCAGTTAGAGTTGCGTC
AGGCGTACCACAGGGAACTGTTCTGGGACCGTTACTCTTCCTCCTGTACA
TAAATGACTTACCAGACCAGCTTGATTCAAATGTTAGGTTATTTGCCGAT
GACTGCCTGTTATATATAGAGTTGTCCACACAGAGTGATTCACAGCTTTT
GCAAGAAGATTTGAACACACTCGAAGAATGGCAAAGCAGATGGCTAATGC
AGTTTAATCCGGAAAAATGTTACATCATGCATATAACAAACAAACGAAAC
CCAATTGTAACCACCTAC Coding sequence (CDS) from alignment at Sc0000535:2100..2967- >transcript:BL80866_cuf0 ID=transcript:BL80866_cuf0|Name=transcript:BL80866_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=867bp|location=Sequence derived from alignment at Sc0000535:2100..2967- (Branchiostoma lanceolatum)
AATGGTGTCGAAAAAATGCTCCAAGGTCTCAATCCATCTAAAGCATCTGG
TCCAGACCAAATACCTCCTTGGTTCCTCAAAATGACAGCCACCGAAATAG
CACCTGTGTTAACCAATATTTTCCAACACTCGTTAGACACAGGAGAAATT
CCCAAAGACTGGAGGGATGCAAATATATGTGCCATTTTTAAAAAGGGAGA
TAGAGCTGTCCCCGGCAACTACCGACCTGTATCACTGACCTGTATATCCT
GCAAACTACTTGAACACATTATCCATAGTCATGTCATGAAACACTTAGAA
AGTTTCAACATATTGACTGACTACCAACATGGATTCAGAGCAAAGCGATC
CACAGAAACACAGCTTATATTGACAGCTCACGACATAGCTGGCGCACTGA
ACAGTAAAAAACAGGTAGATCTAGCAATTCTTGATTTTACTAAAGCTTTC
GATAAAGTCCCACATAGCAGACTCATCACTAAACTAGAGCACTACGGAAT
TCAAGGCACCACACTAAATTGGTTGAAGGCTTTCTTGACCAATAGGGAAC
AGACGGTAGTGGTAGAAGGCAAGGCCTCAGCTCCAGTTAGAGTTGCGTCA
GGCGTACCACAGGGAACTGTTCTGGGACCGTTACTCTTCCTCCTGTACAT
AAATGACTTACCAGACCAGCTTGATTCAAATGTTAGGTTATTTGCCGATG
ACTGCCTGTTATATATAGAGTTGTCCACACAGAGTGATTCACAGCTTTTG
CAAGAAGATTTGAACACACTCGAAGAATGGCAAAGCAGATGGCTAATGCA
GTTTAATCCGGAAAAATGTTACATCATGCATATAACAAACAAACGAAACC
CAATTGTAACCACCTAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000535 | genome | Sc0000535:2100..2967 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80866_cuf0 |
| Biotype | protein_coding |
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