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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80764_cuf0 >transcript:BL80764_cuf0-protein ID=transcript:BL80764_cuf0-protein|Name=transcript:BL80764_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=415bp
ALHRTRDKIDNFTGPYQSGFKRGRSCADIVWAQRMLVSVVMTKHWDFYKM
GIDMSRAFDTIKRSKILAVLDEAGCNDDELRLVRLLLARTKLKVRVKSTY
SADFETTIGSPQGDSLSPVLFTCYLASALSSIRSSSSRPDPPVSDLGMPL
EMEYADDVDFIDEEKDTLQRLLPIAANNLKESNLFVNEGKTEFTHIYLAD
TQETGENDDSLRGVESWRKSKILGSQLCSSSDIEARCIMANIAFQSFWKL
WIRRSKIPLAKKLQIYNATCISIMLYNCNSWAVPKAALDKLDACHRKHLR
KITGYQWPHKISNKALYKMCNTTQLSTKVHHLRWCMLGHILRMPEDTPAQ
KALEFATVGCNKYKARKGRHCTNLLSVLKTDLKNKGMGNLRTAKKLRELR
LLAEKKTQWKEMKKD Run BLAST on NCBI mRNA from alignment at Sc0000112:272533..273843+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80764_cuf0 ID=transcript:BL80764_cuf0|Name=transcript:BL80764_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1311bp|location=Sequence derived from alignment at Sc0000112:272533..273843+ (Branchiostoma lanceolatum)
TTGCTCTCCATCGTACCAGGGACAAAATAGACAATTTCACCGGACCCTAT
CAAAGTGGGTTCAAGAGGGGACGCAGTTGTGCAGACATTGTGTGGGCTCA
ACGCATGCTAGTTTCTGTGGTCATGACCAAGCACTGGGACTTCTACAAGA
TGGGCATAGACATGTCCCGAGCCTTTGACACCATCAAAAGGTCCAAAATC
TTGGCAGTGCTAGATGAAGCAGGGTGCAACGACGATGAACTCCGACTGGT
TAGACTACTACTGGCAAGAACCAAGCTGAAAGTCAGAGTCAAAAGTACCT
ACTCAGCAGACTTTGAAACCACTATTGGCTCCCCACAAGGAGATAGTCTT
TCCCCGGTGTTGTTCACCTGCTATCTTGCTTCTGCACTGTCATCTATACG
GAGTAGTTCATCAAGACCAGACCCCCCAGTTTCCGACCTAGGCATGCCAT
TAGAAATGGAATATGCGGATGACGTGGACTTTATTGATGAAGAGAAGGAC
ACATTACAAAGACTCCTTCCAATAGCTGCCAATAACCTCAAAGAGTCAAA
CCTGTTTGTCAACGAGGGTAAGACAGAATTTACACACATCTACCTGGCTG
ACACTCAGGAAACAGGAGAGAATGACGATTCTCTCCGAGGAGTGGAGAGC
TGGAGGAAGAGTAAGATCCTGGGATCGCAACTGTGCAGCTCCTCAGACAT
AGAGGCACGCTGCATCATGGCTAACATTGCCTTCCAATCGTTTTGGAAAC
TGTGGATCCGTAGGTCAAAGATTCCCCTGGCAAAAAAGCTGCAAATATAC
AACGCAACTTGCATCTCCATAATGCTCTACAACTGCAACAGCTGGGCAGT
GCCAAAGGCAGCATTGGACAAACTTGATGCATGTCATCGAAAACACCTGC
GCAAAATCACAGGGTACCAATGGCCCCACAAAATCTCTAACAAAGCACTA
TACAAGATGTGCAACACCACCCAACTGTCAACTAAAGTTCACCATCTAAG
GTGGTGCATGCTAGGGCACATCCTTCGCATGCCCGAAGACACTCCAGCTC
AAAAGGCACTAGAATTTGCTACAGTGGGGTGCAACAAATACAAGGCCAGG
AAAGGAAGACATTGCACGAACCTACTAAGTGTCCTAAAAACTGATCTCAA
GAACAAAGGAATGGGAAACCTAAGAACAGCAAAGAAACTCAGAGAGCTAC
GGCTGCTCGCAGAAAAGAAGACACAGTGGAAAGAAATGAAGAAAGACTGA
ATGCAGCCAGAGGCTGTTTCCACAACTCCGAGCCGCAGAATACAGTGGAT
CATCATCATCA Coding sequence (CDS) from alignment at Sc0000112:272533..273843+ >transcript:BL80764_cuf0 ID=transcript:BL80764_cuf0|Name=transcript:BL80764_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1248bp|location=Sequence derived from alignment at Sc0000112:272533..273843+ (Branchiostoma lanceolatum)
GCTCTCCATCGTACCAGGGACAAAATAGACAATTTCACCGGACCCTATCA
AAGTGGGTTCAAGAGGGGACGCAGTTGTGCAGACATTGTGTGGGCTCAAC
GCATGCTAGTTTCTGTGGTCATGACCAAGCACTGGGACTTCTACAAGATG
GGCATAGACATGTCCCGAGCCTTTGACACCATCAAAAGGTCCAAAATCTT
GGCAGTGCTAGATGAAGCAGGGTGCAACGACGATGAACTCCGACTGGTTA
GACTACTACTGGCAAGAACCAAGCTGAAAGTCAGAGTCAAAAGTACCTAC
TCAGCAGACTTTGAAACCACTATTGGCTCCCCACAAGGAGATAGTCTTTC
CCCGGTGTTGTTCACCTGCTATCTTGCTTCTGCACTGTCATCTATACGGA
GTAGTTCATCAAGACCAGACCCCCCAGTTTCCGACCTAGGCATGCCATTA
GAAATGGAATATGCGGATGACGTGGACTTTATTGATGAAGAGAAGGACAC
ATTACAAAGACTCCTTCCAATAGCTGCCAATAACCTCAAAGAGTCAAACC
TGTTTGTCAACGAGGGTAAGACAGAATTTACACACATCTACCTGGCTGAC
ACTCAGGAAACAGGAGAGAATGACGATTCTCTCCGAGGAGTGGAGAGCTG
GAGGAAGAGTAAGATCCTGGGATCGCAACTGTGCAGCTCCTCAGACATAG
AGGCACGCTGCATCATGGCTAACATTGCCTTCCAATCGTTTTGGAAACTG
TGGATCCGTAGGTCAAAGATTCCCCTGGCAAAAAAGCTGCAAATATACAA
CGCAACTTGCATCTCCATAATGCTCTACAACTGCAACAGCTGGGCAGTGC
CAAAGGCAGCATTGGACAAACTTGATGCATGTCATCGAAAACACCTGCGC
AAAATCACAGGGTACCAATGGCCCCACAAAATCTCTAACAAAGCACTATA
CAAGATGTGCAACACCACCCAACTGTCAACTAAAGTTCACCATCTAAGGT
GGTGCATGCTAGGGCACATCCTTCGCATGCCCGAAGACACTCCAGCTCAA
AAGGCACTAGAATTTGCTACAGTGGGGTGCAACAAATACAAGGCCAGGAA
AGGAAGACATTGCACGAACCTACTAAGTGTCCTAAAAACTGATCTCAAGA
ACAAAGGAATGGGAAACCTAAGAACAGCAAAGAAACTCAGAGAGCTACGG
CTGCTCGCAGAAAAGAAGACACAGTGGAAAGAAATGAAGAAAGACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000112 | genome | Sc0000112:272533..273843 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80764_cuf0 |
| Biotype | protein_coding |
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