transcript:BL80756_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL80756_cuf0
Unique Nametranscript:BL80756_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL80756_cuf0

>transcript:BL80756_cuf0-protein ID=transcript:BL80756_cuf0-protein|Name=transcript:BL80756_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=227bp
DVSYNKLQSIPPGVYELLSLENFDMSYNSVQELQTVPPTKFPNLVYLNLS
YNMFQTVPDGILKTQSLMYLNLLGNDIASLPADIARLSNLNTLCYDIRRL
QSLSHVSPELKTMPWKNIEWTVNISCNDKPTSVRSEAHFSARPDVGHYLQ
VQTDRKEVTEIGSYEHIQLQYEINCSIAWFDDTLKELILSNCSMQALPEH
IFCLSKLTILDVSSNRLSSFPSKLTSL
Run BLAST on NCBI

mRNA from alignment at Sc0000100:83900..84580-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL80756_cuf0 ID=transcript:BL80756_cuf0|Name=transcript:BL80756_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=681bp|location=Sequence derived from alignment at Sc0000100:83900..84580- (Branchiostoma lanceolatum)
GATGTTTCCTATAACAAACTCCAGTCCATTCCTCCAGGGGTATATGAATT ACTTTCATTAGAGAATTTTGACATGTCGTACAATTCTGTCCAAGAGCTAC AGACTGTACCTCCAACAAAGTTCCCAAATTTGGTGTACCTGAATTTGTCT TACAATATGTTCCAAACTGTGCCAGATGGCATTTTAAAAACACAAAGTCT AATGTACCTAAATCTGTTAGGAAATGATATTGCATCCCTCCCTGCTGACA TTGCCAGACTATCGAACCTCAATACTCTCTGTTATGATATAAGAAGACTA CAAAGTCTGAGCCATGTGTCACCTGAATTGAAGACCATGCCATGGAAGAA CATTGAATGGACTGTGAACATCAGTTGTAATGATAAGCCTACCTCTGTTA GGAGTGAAGCCCACTTCAGTGCAAGACCAGATGTAGGACATTATTTACAA GTCCAAACTGATAGGAAAGAAGTGACTGAAATTGGATCATATGAACATAT ACAGTTACAGTATGAGATCAATTGTAGTATAGCTTGGTTTGACGATACCC TAAAAGAGTTGATCTTGTCAAATTGCAGTATGCAAGCTTTACCAGAGCAT ATATTTTGCCTTTCAAAGTTAACAATATTGGATGTCAGTAGCAACAGGTT GTCAAGTTTTCCTAGTAAATTAACCAGCTTG

Coding sequence (CDS) from alignment at Sc0000100:83900..84580-

>transcript:BL80756_cuf0 ID=transcript:BL80756_cuf0|Name=transcript:BL80756_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=681bp|location=Sequence derived from alignment at Sc0000100:83900..84580- (Branchiostoma lanceolatum)
GATGTTTCCTATAACAAACTCCAGTCCATTCCTCCAGGGGTATATGAATT
ACTTTCATTAGAGAATTTTGACATGTCGTACAATTCTGTCCAAGAGCTAC
AGACTGTACCTCCAACAAAGTTCCCAAATTTGGTGTACCTGAATTTGTCT
TACAATATGTTCCAAACTGTGCCAGATGGCATTTTAAAAACACAAAGTCT
AATGTACCTAAATCTGTTAGGAAATGATATTGCATCCCTCCCTGCTGACA
TTGCCAGACTATCGAACCTCAATACTCTCTGTTATGATATAAGAAGACTA
CAAAGTCTGAGCCATGTGTCACCTGAATTGAAGACCATGCCATGGAAGAA
CATTGAATGGACTGTGAACATCAGTTGTAATGATAAGCCTACCTCTGTTA
GGAGTGAAGCCCACTTCAGTGCAAGACCAGATGTAGGACATTATTTACAA
GTCCAAACTGATAGGAAAGAAGTGACTGAAATTGGATCATATGAACATAT
ACAGTTACAGTATGAGATCAATTGTAGTATAGCTTGGTTTGACGATACCC
TAAAAGAGTTGATCTTGTCAAATTGCAGTATGCAAGCTTTACCAGAGCAT
ATATTTTGCCTTTCAAAGTTAACAATATTGGATGTCAGTAGCAACAGGTT
GTCAAGTTTTCCTAGTAAATTAACCAGCTTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL80756gene:BL80756Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL80756_cuf0-E1BL80756_cuf0-E1-1564476830-300343Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL80756_cuf0transcript:BL80756_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000100genomeSc0000100:83900..84580 -
Properties
Property NameValue
Transcript idBL80756_cuf0
Biotypeprotein_coding