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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80745_cuf0 >transcript:BL80745_cuf0-protein ID=transcript:BL80745_cuf0-protein|Name=transcript:BL80745_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=535bp
KEIPEALSLLCNLTHLDISNNIITGLPRGLVALKEIECFYINRNKIVWER
FIDLASYKKLKYVKFDLIDYPHLDSLPSSLISVTVTLCDSQINHVADIDW
DIQTSRKPHKYFDFVVRSLQGSTPNEVTLSSCDMHTISPIVLALPRGSER
VNSLLLSDNSLSEVPSDTFKLSYLQRLDLSRNNISLIPSNLWRLPNLKYL
DVSSNEIREITEEISFARRLTTFLAQANELNVLPQSISTLPLLEELCVFS
NDIDISRTPSLWSMMTLQHLKIDLANVVNCDSHLTCSESLFMHGYHQNES
VTVVSAKIFFEKMSRISMSLQQIDKQISINLADFGLVVFPGPIISHLNVE
VIDLSRNEIRYITKEVSKLHHLRKITLSHNGIQNFPQHLHLCTSLRHLDL
YLNAIQSLPDDIGEMKGLQHLNLSSNSLKGLPLSIGNLQQLEELVLEYNQ
IEQLPDSIGTLEKLTILRLSANCLRAVPSLLCNLVCLKEIDLSNNRLESI
PEIVGSLKNVVSIDLSGNSLSMLPSSICGCHSLKS Run BLAST on NCBI mRNA from alignment at Sc0000100:78067..79673- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80745_cuf0 ID=transcript:BL80745_cuf0|Name=transcript:BL80745_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1607bp|location=Sequence derived from alignment at Sc0000100:78067..79673- (Branchiostoma lanceolatum)
AAAGAGATCCCTGAGGCCTTGTCTTTACTTTGTAATCTCACCCATTTGGA
CATCAGCAACAATATCATTACAGGTTTGCCAAGAGGATTGGTTGCACTAA
AAGAAATTGAGTGCTTCTACATCAACCGAAACAAGATAGTCTGGGAAAGA
TTTATTGATCTAGCATCTTACAAGAAGCTCAAGTATGTCAAGTTTGATCT
TATTGATTACCCCCATTTGGACAGCCTGCCTTCAAGTTTGATATCTGTTA
CCGTCACCTTATGTGACAGTCAAATAAACCACGTTGCTGACATAGACTGG
GACATTCAAACATCCAGAAAACCACACAAGTATTTTGACTTTGTAGTCAG
GTCATTGCAGGGCAGCACACCTAATGAGGTTACCTTATCTAGCTGTGACA
TGCACACAATTTCTCCAATTGTTCTTGCCCTGCCACGGGGAAGTGAAAGG
GTGAATTCTCTTCTGCTCTCTGATAACAGCTTATCTGAAGTTCCATCTGA
TACTTTTAAATTATCATATCTTCAACGTCTGGATTTAAGTAGAAATAACA
TCAGCTTGATACCAAGTAACCTTTGGAGGTTGCCAAACCTCAAATATCTT
GATGTCAGTTCTAACGAGATAAGGGAAATAACAGAGGAAATCTCATTTGC
CAGAAGGTTGACAACTTTTCTAGCACAGGCTAATGAACTTAATGTATTAC
CTCAAAGTATTTCCACCTTGCCATTGCTGGAGGAACTTTGTGTTTTTTCA
AATGACATAGACATCAGCAGAACTCCAAGTTTGTGGTCCATGATGACTTT
ACAACACCTTAAAATCGATCTGGCAAATGTTGTGAATTGTGACAGCCATC
TAACATGCAGTGAAAGTCTGTTTATGCATGGTTACCATCAGAATGAGAGT
GTTACTGTCGTCTCAGCTAAAATCTTCTTTGAAAAAATGTCAAGAATAAG
TATGTCACTGCAACAAATTGACAAGCAGATTTCCATTAACCTAGCAGATT
TTGGTCTAGTAGTATTTCCTGGGCCAATTATTTCTCATCTAAATGTTGAG
GTGATAGATTTATCCCGAAATGAAATAAGGTATATTACCAAGGAGGTATC
CAAGCTCCACCATTTGCGGAAAATCACATTGTCTCATAATGGTATCCAGA
ATTTCCCTCAACATCTGCATCTTTGTACCTCACTCAGGCATCTTGATCTT
TACCTCAATGCAATACAAAGTCTTCCAGATGATATTGGAGAGATGAAAGG
GCTTCAACATCTAAACCTGTCAAGTAACAGTCTAAAAGGTTTACCACTGT
CTATTGGCAATCTTCAGCAACTTGAAGAGTTGGTTCTTGAATACAACCAA
ATAGAACAGCTACCAGATAGTATTGGAACATTAGAGAAGCTTACTATACT
AAGACTCTCTGCAAACTGCTTAAGGGCAGTTCCAAGTTTGTTATGTAACC
TGGTTTGTCTGAAAGAAATTGACCTGTCAAACAACAGACTCGAGAGTATT
CCTGAAATAGTAGGAAGTTTGAAAAATGTTGTATCCATTGACCTTAGTGG
AAATAGTTTGTCCATGTTGCCATCATCAATTTGTGGTTGTCATTCATTGA
AAAGCAT Coding sequence (CDS) from alignment at Sc0000100:78067..79673- >transcript:BL80745_cuf0 ID=transcript:BL80745_cuf0|Name=transcript:BL80745_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1605bp|location=Sequence derived from alignment at Sc0000100:78067..79673- (Branchiostoma lanceolatum)
AAAGAGATCCCTGAGGCCTTGTCTTTACTTTGTAATCTCACCCATTTGGA
CATCAGCAACAATATCATTACAGGTTTGCCAAGAGGATTGGTTGCACTAA
AAGAAATTGAGTGCTTCTACATCAACCGAAACAAGATAGTCTGGGAAAGA
TTTATTGATCTAGCATCTTACAAGAAGCTCAAGTATGTCAAGTTTGATCT
TATTGATTACCCCCATTTGGACAGCCTGCCTTCAAGTTTGATATCTGTTA
CCGTCACCTTATGTGACAGTCAAATAAACCACGTTGCTGACATAGACTGG
GACATTCAAACATCCAGAAAACCACACAAGTATTTTGACTTTGTAGTCAG
GTCATTGCAGGGCAGCACACCTAATGAGGTTACCTTATCTAGCTGTGACA
TGCACACAATTTCTCCAATTGTTCTTGCCCTGCCACGGGGAAGTGAAAGG
GTGAATTCTCTTCTGCTCTCTGATAACAGCTTATCTGAAGTTCCATCTGA
TACTTTTAAATTATCATATCTTCAACGTCTGGATTTAAGTAGAAATAACA
TCAGCTTGATACCAAGTAACCTTTGGAGGTTGCCAAACCTCAAATATCTT
GATGTCAGTTCTAACGAGATAAGGGAAATAACAGAGGAAATCTCATTTGC
CAGAAGGTTGACAACTTTTCTAGCACAGGCTAATGAACTTAATGTATTAC
CTCAAAGTATTTCCACCTTGCCATTGCTGGAGGAACTTTGTGTTTTTTCA
AATGACATAGACATCAGCAGAACTCCAAGTTTGTGGTCCATGATGACTTT
ACAACACCTTAAAATCGATCTGGCAAATGTTGTGAATTGTGACAGCCATC
TAACATGCAGTGAAAGTCTGTTTATGCATGGTTACCATCAGAATGAGAGT
GTTACTGTCGTCTCAGCTAAAATCTTCTTTGAAAAAATGTCAAGAATAAG
TATGTCACTGCAACAAATTGACAAGCAGATTTCCATTAACCTAGCAGATT
TTGGTCTAGTAGTATTTCCTGGGCCAATTATTTCTCATCTAAATGTTGAG
GTGATAGATTTATCCCGAAATGAAATAAGGTATATTACCAAGGAGGTATC
CAAGCTCCACCATTTGCGGAAAATCACATTGTCTCATAATGGTATCCAGA
ATTTCCCTCAACATCTGCATCTTTGTACCTCACTCAGGCATCTTGATCTT
TACCTCAATGCAATACAAAGTCTTCCAGATGATATTGGAGAGATGAAAGG
GCTTCAACATCTAAACCTGTCAAGTAACAGTCTAAAAGGTTTACCACTGT
CTATTGGCAATCTTCAGCAACTTGAAGAGTTGGTTCTTGAATACAACCAA
ATAGAACAGCTACCAGATAGTATTGGAACATTAGAGAAGCTTACTATACT
AAGACTCTCTGCAAACTGCTTAAGGGCAGTTCCAAGTTTGTTATGTAACC
TGGTTTGTCTGAAAGAAATTGACCTGTCAAACAACAGACTCGAGAGTATT
CCTGAAATAGTAGGAAGTTTGAAAAATGTTGTATCCATTGACCTTAGTGG
AAATAGTTTGTCCATGTTGCCATCATCAATTTGTGGTTGTCATTCATTGA
AAAGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000100 | genome | Sc0000100:78067..79673 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80745_cuf0 |
| Biotype | protein_coding |
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