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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80701_cuf0 >transcript:BL80701_cuf0-protein ID=transcript:BL80701_cuf0-protein|Name=transcript:BL80701_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=365bp
MTGLKSSPQAPPVTNDLFKATDKPGILCSLVSTDFSKAFDRVSHNVAIQR
LLQLGLRPSVTRWIVDFLSNRSQAVRYHGTLSDNLNVTCGLPQGTLLGPI
IFLAYINCAARHAASKRWKFVDDLNLLEIRNPTSSPSNMQQDLNDLDHWS
RTSHMKLHPKKCKVMHVQFRKSHSIPPPLTVDNIEVIQVKVMRVLGVILQ
ADLKWNSHVDSICTKANQRMFFLKKLKHFHLSIEDLITVYISYIRPILEY
ASPIWHPGLPKTLSDKIEKVQRRALRVILGVEFTSYSAACSLMGLPTLNS
RRRTLTESFAKKLVRSGQFQHLLPPTRGNISGRQTRSSHKLDLQYGRTDR
YMNSALPHMIRFLNT Run BLAST on NCBI mRNA from alignment at Sc0000443:140720..142647- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80701_cuf0 ID=transcript:BL80701_cuf0|Name=transcript:BL80701_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1928bp|location=Sequence derived from alignment at Sc0000443:140720..142647- (Branchiostoma lanceolatum)
GATCACAACTTGGTGAACTTTCAACCCAAAGCAAGGAGGATGATCAACAG
GATGGTGAAACGTGTGCACAGACCCATGAAGGACTCGTCATTGCGATCTT
TCGGGCAGTGGATTGCGTCTTATGACTGGCCTGAAGTCTTCACCGCAAGC
ACCGCCTGTNACTAATGACTTATTCAAAGCTACGGATAAACCTGGGATAC
TTTGCTCTCTTGTCTCAACGGATTTCAGTAAGGCCTTTGATCGTGTAAGT
CATAACGTTGCAATCCAACGCCTGCTTCAACTCGGACTGCGCCCGTCAGT
GACGAGATGGATTGTAGACTTTCTTAGTAACAGAAGCCAGGCTGTTCGTT
ACCACGGAACACTTTCCGACAACTTGAACGTTACCTGTGGATTACCCCAG
GGGACTTTACTCGGACCAATAATATTTCTAGCCTACATTAACTGTGCCGC
GCGTCACGCTGCCTCCAAACGCTGGAAATTTGTAGACGACTTGAACCTAT
TAGAGATAAGGAACCCCACCTCAAGTCCTTCAAACATGCAACAGGACCTT
AACGACTTGGATCATTGGTCTCGCACGAGTCACATGAAGTTACACCCGAA
GAAATGTAAAGTGATGCATGTCCAATTCAGAAAGTCCCATTCCATCCCCC
CTCCTCTTACTGTTGACAACATTGAAGTTATACAGGTGAAGGTGATGAGA
GTTTTGGGTGTTATCCTCCAGGCTGACCTTAAATGGAACTCACACGTGGA
CTCAATCTGTACTAAAGCTAATCAGCGCATGTTTTTTCTCAAGAAACTGA
AGCACTTCCATCTCTCCATAGAGGACCTGATCACGGTGTACATTTCCTAC
ATTCGGCCAATTTTGGAATATGCCTCTCCGATTTGGCACCCCGGACTGCC
TAAGACCTTAAGTGACAAAATCGAGAAAGTCCAAAGAAGAGCCCTGCGCG
TCATCCTGGGTGTTGAGTTCACATCGTACTCCGCTGCTTGCTCTCTTATG
GGACTGCCAACCCTCAACTCACGACGGAGAACTCTGACAGAGTCGTTTGC
GAAGAAGCTTGTACGATCAGGTCAATTCCAGCACCTACTTCCACCAACTA
GAGGGAACATCAGTGGCCGGCAAACACGGTCGTCACATAAACTTGACCTT
CAATATGGTCGAACTGACCGGTATATGAACAGTGCGTTACCACACATGAT
TCGCTTTCTGAACACTTAAAAAATCCACGACTATTTGTGTTACGAGATGA
AGCTTTCCTTGTGTATACTGCCGTATTTTAACATGTATTGTTAGGTATAT
TGTTTATTTTAACAAGTATTGTTGTGTATATTGTCATATTTTAACAAGCA
TCGTTGTATTTTAACGAGTATTCCTTAATTATTGCGGATGAAATGAAGTA
CTTGTTTTAAATGAAATGTAAATGTGTCTCGGCAATTCAGCCTCACAGCT
GCTTATGAGATCATTCAAATAAACCAGTCTTATTNTTGCGAAGAAGCTTG
TACGATCAGGTCAATTCCAGCACCTACTTCCACCAACTAGAGGGAACATC
AGTGGCCGGCAAACACGGTCGTCACATAAACTTGACCTTCAATATGGTCG
AACTGACCGGTATATGAACAGTGCGTTACCACACATGATTCGCTTTCTGA
ACACTTAAAAAATCCACGACTATATGTGTTACGAGATGAAGCTTTCCCTT
TGTATACTGCCGTATTTTAACATGCATTGTTAGGTATATTGTTTATTTTA
ACAAATATTGTTGTGTATATTGTCATATTTTAACAAGCATCGTTGTATTT
TAACGAGTATTCCTTAATTATTGCGGATGAAATGAAGTACTTGTTCTAAA
TGAAATGTAAATGTGTCTCGGCAATTCAGCCTCACAGCTGCTTATGAGAT
CATTCAAATAAACCAGTCTTATTTTGAT Coding sequence (CDS) from alignment at Sc0000443:140720..142647- >transcript:BL80701_cuf0 ID=transcript:BL80701_cuf0|Name=transcript:BL80701_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1098bp|location=Sequence derived from alignment at Sc0000443:140720..142647- (Branchiostoma lanceolatum)
ATGACTGGCCTGAAGTCTTCACCGCAAGCACCGCCTGTNACTAATGACTT
ATTCAAAGCTACGGATAAACCTGGGATACTTTGCTCTCTTGTCTCAACGG
ATTTCAGTAAGGCCTTTGATCGTGTAAGTCATAACGTTGCAATCCAACGC
CTGCTTCAACTCGGACTGCGCCCGTCAGTGACGAGATGGATTGTAGACTT
TCTTAGTAACAGAAGCCAGGCTGTTCGTTACCACGGAACACTTTCCGACA
ACTTGAACGTTACCTGTGGATTACCCCAGGGGACTTTACTCGGACCAATA
ATATTTCTAGCCTACATTAACTGTGCCGCGCGTCACGCTGCCTCCAAACG
CTGGAAATTTGTAGACGACTTGAACCTATTAGAGATAAGGAACCCCACCT
CAAGTCCTTCAAACATGCAACAGGACCTTAACGACTTGGATCATTGGTCT
CGCACGAGTCACATGAAGTTACACCCGAAGAAATGTAAAGTGATGCATGT
CCAATTCAGAAAGTCCCATTCCATCCCCCCTCCTCTTACTGTTGACAACA
TTGAAGTTATACAGGTGAAGGTGATGAGAGTTTTGGGTGTTATCCTCCAG
GCTGACCTTAAATGGAACTCACACGTGGACTCAATCTGTACTAAAGCTAA
TCAGCGCATGTTTTTTCTCAAGAAACTGAAGCACTTCCATCTCTCCATAG
AGGACCTGATCACGGTGTACATTTCCTACATTCGGCCAATTTTGGAATAT
GCCTCTCCGATTTGGCACCCCGGACTGCCTAAGACCTTAAGTGACAAAAT
CGAGAAAGTCCAAAGAAGAGCCCTGCGCGTCATCCTGGGTGTTGAGTTCA
CATCGTACTCCGCTGCTTGCTCTCTTATGGGACTGCCAACCCTCAACTCA
CGACGGAGAACTCTGACAGAGTCGTTTGCGAAGAAGCTTGTACGATCAGG
TCAATTCCAGCACCTACTTCCACCAACTAGAGGGAACATCAGTGGCCGGC
AAACACGGTCGTCACATAAACTTGACCTTCAATATGGTCGAACTGACCGG
TATATGAACAGTGCGTTACCACACATGATTCGCTTTCTGAACACTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000443 | genome | Sc0000443:140720..142647 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80701_cuf0 |
| Biotype | protein_coding |
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