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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80682_cuf0 >transcript:BL80682_cuf0-protein ID=transcript:BL80682_cuf0-protein|Name=transcript:BL80682_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=111bp
AMVLSSWSHCSLEQVAAAAPRGVRWFYLLFYRDRGRMKRLLERAERAGYT
AIVLTVDSPIYPFTLRKTPVVFPVQFRLPNVWLDDDVVPGVPGSLEHEAG
LTRIAKNAATW Run BLAST on NCBI mRNA from alignment at xpSc0039704:34574..35640+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80682_cuf0 ID=transcript:BL80682_cuf0|Name=transcript:BL80682_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1067bp|location=Sequence derived from alignment at xpSc0039704:34574..35640+ (Branchiostoma lanceolatum)
CAGCGATGGTCCTGAGCTCCTGGTCGCACTGCTCCTTGGAACAGGTGGCT
GCCGCGGCTCCGCGGGGGGTCCGCTGGTTCTACCTGCTGTTCTACCGAGA
CCGAGGCCGGATGAAGCGGCTCCTGGAGCGGGCAGAGCGGGCGGGCTACA
CCGCCATAGTCCTCACCGTCGACTCCCCTATTTACCCGTTTACTCTTCGC
AAGACTCCCGTAGTTTTTCCTGTACAATTTAGGTAAGAAAACCCGACTTC
TTATGTCACATCATTTAACCATCATACGACCTTACCAGTTAGCCTCCGTT
GCAGTCCTTCCCACTAGCGTACTACGATTTCCCAACTTATCGGGTCCAGT
ATCTGCTTTAGGCCCCGTATCTGCTTGGGATCCTGTAACCGCTGTAATGT
TGTAGCCACAGCGAATACAAGACCACAGCAGTTACAGGATCCCAAGCAGA
TACGGGGCCTCAAGCAGATACGGCTAGTACGCTAGTGGGAAGGACTGCAA
CGGAGGCTACTTACCATTAAGACCCCCATTCCACTATACGGCGATCGCCC
TGTAACCTAAATCGAATAGGTCCATTTCTTTTATTTCATAATTGGAATGT
CATGCAAAATGTAAAAGTATGGCTGAGAAAACAACAAAACACACAAAGCG
TACAAATATTTTTTTTATCTATGAAATTCGGTGAGCGCTCTGGTCAATTT
GAGGTTGCATCGAGTCAGCGCGGCGAGAGCTACTCTCCAAGCAGAGCTAG
GGTTGGCGACACAACAAAAACGATGACAAAGTAGAAGGCATGACAAAAAC
GCCTAAAAACACGTCAAAAACCAGCCGAAACCCTAGCTCTGCTTGGAGAG
TAGGCGAGAGCGCCGTCCTAGTGGAATAGTGTCATTAACTTTAAGCAAGG
AGGTTATTGCTTTAAGGGAGGAAGGGTTGCTCATTCACTGAAACAGATGG
AAGTTCCTCCAGGTTGCCGAACGTCTGGCTGGATGACGACGTTGTCCCCG
GCGTTCCCGGCTCGCTGGAACACGAGGCCGGCCTGACCAGGATCGCGAAG
AACGCCGCTACGTGGGA Coding sequence (CDS) from alignment at xpSc0039704:34574..35640+ >transcript:BL80682_cuf0 ID=transcript:BL80682_cuf0|Name=transcript:BL80682_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=666bp|location=Sequence derived from alignment at xpSc0039704:34574..35640+ (Branchiostoma lanceolatum)
GCGATGGTCCTGAGCTCCTGGTCGCACTGCTCCTTGGAACAGGTGGCTGC
CGCGGCTCCGCGGGGGGTCCGCTGGTTCTACCTGCTGTTCTACCGAGACC
GAGGCCGGATGAAGCGGCTCCTGGAGCGGGCAGAGCGGGCGGGCTACACC
GCCATAGTCCTCACCGTCGACTCCCCTATTTACCCGTTTACTCTTCGCAA
GACTCCCGTAGTTTTTCCTGTACAATTTAGGTTGCCGAACGTCTGGCTGG
ATGACGACGTTGTCCCCGGCGTTCCCGGCTCGCTGGAACACGAGGCCGGC
CTGACCAGGATCGCGAAGAACGCCGCTACGTGGGCGATGGTCCTGAGCTC
CTGGTCGCACTGCTCCTTGGAACAGGTGGCTGCCGCGGCTCCGCGGGGGG
TCCGCTGGTTCTACCTGCTGTTCTACCGAGACCGAGGCCGGATGAAGCGG
CTCCTGGAGCGGGCAGAGCGGGCGGGCTACACCGCCATAGTCCTCACCGT
CGACTCCCCTATTTACCCGTTTACTCTTCGCAAGACTCCCGTAGTTTTTC
CTGTACAATTTAGGTTGCCGAACGTCTGGCTGGATGACGACGTTGTCCCC
GGCGTTCCCGGCTCGCTGGAACACGAGGCCGGCCTGACCAGGATCGCGAA
GAACGCCGCTACGTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039704 | genome | xpSc0039704:34574..35640 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80682_cuf0 |
| Biotype | protein_coding |
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