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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80663_cuf0 >transcript:BL80663_cuf0-protein ID=transcript:BL80663_cuf0-protein|Name=transcript:BL80663_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=241bp
MSFQKFLLGVNSKSSNDGIRGELGTFPIIIDAKIKLIKYWHRLINLPEDT
LLREAYDVLHSADSDWVNHVNDIFNYNGFGHAWTNPRSYKVDVLTDQLRT
RLQDIYLQKWRTSIQNNSKLSIYSVLKKRYGQEKYLSDIHNFEVRRAITK
IRICSHRLNVEIGRYQKIPRDQRFCPFCPNEIEDERHFILDCPRYHDKRS
KLFNLLSACSTEFDAFHSIDKFKYILEGDNPYCVQIGKYIR Run BLAST on NCBI mRNA from alignment at Sc0000065:517898..519454- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80663_cuf0 ID=transcript:BL80663_cuf0|Name=transcript:BL80663_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1557bp|location=Sequence derived from alignment at Sc0000065:517898..519454- (Branchiostoma lanceolatum)
GAAAGCTTCAATGAATCTTTATGATTTTTGGTAGGTGTGTAGTGGTTGCG
CAAAGAAAAGTCAAGTTCGAAAATGGTTCACCTTGGACGTGGGTGTTTTT
GTTTTGACATTCGGACATGAATAACTTAAGAAGGGGTCGAAAAATCGTCT
TGATGTTTGGTATGTAAAGAGCTCAGATTGTGCTTTACATTATCAATAAC
TAATTATGCAAATCATGAGCTAATTTGCATAATTAGTAAGGAAAGTTTGT
TAGCCTACTGCATTTCAATGGGACATGGGACAGTGTCAGGTCATGTAAAC
AGATGGCCTTGCATAAACATACTTGTAGATCAAATAAATAAACTATTCTC
CAAGCAGAGGTGTGGGTCCTGCTGGTTTAACGCGTTCAGTTTAGGCCTTT
TTGTTCAAAACGGTTGGCGACATAACGAAATAGGGACAAAATAGAAAGCC
TGACAAAAACACCTAAAAACACCTAGAAACACGTCAACAACCAGCCAGAT
TTATTCTGTTCATATATATAAAAATCAGATAAGGATAAATTGTTAAGACT
CGCGTCTGGCCTTAAATTAGAAAATGACAACATAGCAATTGAAAATATAC
ATCTTCCCCTACAAATCCCAGAATTTGATACCATAGATATGAGCTTCCAG
AAATTTTTACTTGGAGTAAATTCCAAATCATCAAATGACGGAATTCGTGG
TGAATTGGGAACTTTCCCAATCATTATTGATGCTAAAATAAAACTTATCA
AATACTGGCACCGGTTAATAAATTTACCCGAAGACACTCTACTTCGTGAA
GCATACGACGTTTTACATTCCGCCGACTCTGACTGGGTGAATCATGTAAA
TGACATTTTTAATTATAACGGTTTTGGGCATGCATGGACGAACCCTAGGT
CATACAAAGTTGATGTGTTGACTGATCAATTACGAACCCGTTTACAAGAT
ATATACTTACAAAAATGGCGTACTTCTATTCAAAACAATTCAAAACTTTC
CATTTATTCTGTGTTAAAGAAAAGGTACGGACAAGAAAAGTACCTATCGG
ATATACATAATTTCGAAGTTCGTAGAGCAATCACCAAGATAAGAATATGT
AGTCATAGATTAAATGTGGAAATCGGAAGATACCAAAAAATTCCCCGTGA
CCAGAGGTTTTGTCCATTCTGTCCAAATGAGATTGAAGATGAGCGACACT
TTATCCTAGATTGTCCACGATATCATGATAAGCGCTCAAAGCTGTTCAAC
CTTCTTTCCGCCTGCTCAACAGAATTTGATGCATTCCATTCTATAGATAA
ATTCAAATACATTCTAGAAGGAGACAACCCTTACTGTGTACAAATAGGTA
AATATATCAGATAATGTTTAGATCTTAGAACTAGTAGTGTAAGTGATAGT
TTAAACTCGACATGTTAAAGTATTCATATACTTGTTATACTTGTACTAAG
GTGAATTATTTTGTATCCCATTGTTGTTGTTTGCATGTTTAGTTGTAGAA
GACCTTACGGAAGTCGCTGTACTTTTGTTGTGTCAATAAAGATTTCTCTG
TTATATT Coding sequence (CDS) from alignment at Sc0000065:517898..519454- >transcript:BL80663_cuf0 ID=transcript:BL80663_cuf0|Name=transcript:BL80663_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=726bp|location=Sequence derived from alignment at Sc0000065:517898..519454- (Branchiostoma lanceolatum)
ATGAGCTTCCAGAAATTTTTACTTGGAGTAAATTCCAAATCATCAAATGA
CGGAATTCGTGGTGAATTGGGAACTTTCCCAATCATTATTGATGCTAAAA
TAAAACTTATCAAATACTGGCACCGGTTAATAAATTTACCCGAAGACACT
CTACTTCGTGAAGCATACGACGTTTTACATTCCGCCGACTCTGACTGGGT
GAATCATGTAAATGACATTTTTAATTATAACGGTTTTGGGCATGCATGGA
CGAACCCTAGGTCATACAAAGTTGATGTGTTGACTGATCAATTACGAACC
CGTTTACAAGATATATACTTACAAAAATGGCGTACTTCTATTCAAAACAA
TTCAAAACTTTCCATTTATTCTGTGTTAAAGAAAAGGTACGGACAAGAAA
AGTACCTATCGGATATACATAATTTCGAAGTTCGTAGAGCAATCACCAAG
ATAAGAATATGTAGTCATAGATTAAATGTGGAAATCGGAAGATACCAAAA
AATTCCCCGTGACCAGAGGTTTTGTCCATTCTGTCCAAATGAGATTGAAG
ATGAGCGACACTTTATCCTAGATTGTCCACGATATCATGATAAGCGCTCA
AAGCTGTTCAACCTTCTTTCCGCCTGCTCAACAGAATTTGATGCATTCCA
TTCTATAGATAAATTCAAATACATTCTAGAAGGAGACAACCCTTACTGTG
TACAAATAGGTAAATATATCAGATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000065 | genome | Sc0000065:517898..519454 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80663_cuf0 |
| Biotype | protein_coding |
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