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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79199_cuf5 >transcript:BL79199_cuf5-protein ID=transcript:BL79199_cuf5-protein|Name=transcript:BL79199_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=100bp
FPPEDREVFGVLYSVLILIFPPEDREVFGVLYSVLILIFPPEDREVFGVL
YSVLILIFPPEDREVFGVLYSVLILLFLPEDREVFGVLYSVLILDLLFLP Run BLAST on NCBI mRNA from alignment at Sc0000208:440434..443368+ Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79199_cuf5 ID=transcript:BL79199_cuf5|Name=transcript:BL79199_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=2935bp|location=Sequence derived from alignment at Sc0000208:440434..443368+ (Branchiostoma lanceolatum)
TTTCCCCCTGAAGACAGAGAGGTGTTTGGCGTTCTATACTCTGTACTGAT
TCTGATATTTCCCCCTGAAGACAGAGAGGTGTTTGGCGTTCTATACTCTG
TACTGATTCTGATATTTCCTCCTGAAGACAGAGAGGTGTTTGGCGTTCTA
TACTCTGTACTGATTCTGATATTTCCTCCTGAAGACAGAGAGGTGTTTGG
CGTTCTATACTCTGTACTTATTCTGCTCTTTCTCCCTGAAGACAGAGAGG
TGTTTGGCGTTCTATACTCTGTATTGATTCTAGATCTGCTCTTTCTCCCT
TAAGACAGAGAGGTGTTTGGCTGTCAGTACTCTGTACAGATGCAACTCCT
TTTCCCCTGAAGACAGTGGTGTTTGGATGCTGTACATAACTGTTTTTCCC
CAGAAGACAGAGATACACCTGATGTGTATTCGTATACATGTATAGGATAT
ATTATGTCTGTTTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTTTTTA
TATAATCACATTAGTGTCTTTCCACCTGTCCATAGTCGAGAATAAAATGC
ACAATATGTGTTTTGCTTTGTCCTACACTGTCTTCACACCTGTCCATAAT
TGTGAATTAATTGCACTTATGTGTTTGTCTTCGTTGGGGGTTAGGGGGCT
CTGGGTAGTGATAGCTTAGCAGCTGCACTCAAGACTCTTTAAGAGTGGCT
AAGCACACGGTTCCTTCTGCTCTACTCTTCACCATAGGGTGTGTAGCATA
CAGGTTCCTCCCATCCCCTAAAGCCTCTCACGTTCTGGCTCCTCGTTGCC
AACCCCTGGTCAACGGTTTCAGCTGGCCGGCCAAACGACGTGAGGGGGTG
GTGTTGACACCTTGCAGTGCCAAGCAGTACTTCCAGTGACAAGCAAAGGT
TGGAGGGAGAATTGCTACCTTCTTCTGATTGGTACATTTGGAAATCAAAG
GGTGTACCATTCAGAAAAAAGGTAACATTTTCTCCCTACAACCTCTACTT
GAAGAGTGAAGAGGTTATCATCACTCATCATCATTTTAAGTACAAATCCA
TTCCAATTCAGTCTTTTTATGAAATTGAGATGTTGGCTGCTGTTCCCTAA
ATACACTTTAGCAGACACTTATGTGAAGCTTCAGGTCTAAATGCAATGAG
GTAGGCAAGAAGCAGACAGTTCTATTTGACATCTAGCTCATCCTAATACA
TGTGACTGCAAAGCTGATGAATGTGTATGATAACTCTGTCACAAGTTATA
TACTGTATCTGATGTCTATGTGATATACCAATTCACCTTATCTGGGCCAT
CCAAACCTTTTCAGCCAGCCAAGTAGATATGAATGTCCAGAAGCGTTGAA
TGCTGTTTGTATTGTTCCACAAAACATGCTGAACACAAACATAGGCAAAC
TGCTGAATACTGATGCACAAAGGGAGGGATATTGGTTGTTATTGAAAAAT
GTATAAATAAAAAGTACTCAATAAAACTTCACATCCTCTGTTACGCCTGT
GCCGGACTTTCCTTTAGTAAACGTTTGATCTGTTTACCAGCAATAGCCTT
GAAATTCAAAGTTATTTATAATTATGAAGTTTGCATTTGATATACAGATA
AGGCATGTGTTAGATATTACACCTAAAATTGTCTCTGCTTAAGTGCATTC
TTTTTAATTTGGTCCTTCACACTTTGCACTTAGTTTTTCAATCATGATAT
ATTTATGATAGATGTATGTAATATCTTGGGTCAGAGTAAAAGTTAGGTCT
GTTAACAGGTAATGCACATCTGAAGTAGAGGTATCAGAGTGACATAACGG
TTCTGGGAGACACCTTAAATGTACTAGCTTGTCTCCCTGAACTCTGATAC
CGCCCTACTATTTTTTATTCAGAAAGTGAGCTATGTAATTAGGGTAGTCC
ACCTAGAGAATTGATTTTGAGTCGGGAACCACGTAGAATTGAATGACAAT
CACAAGTTTAACTTAAGACATCCTGCACAAAATAATTTGGTGCCTTGTGA
CAAGACTACGGCATGCAACAGGTAATTTGATATTATTAGTGAACTTCGAG
GCTCTAGCAATATTTGGGTAACTTGTAAGGTCCTGAAACCATACAGGTGA
TGTTTCGACCGCCATGGCAATCGATTAGATAAATCCTCTGCAGTAATCTT
TGCAGACCAGGTAAAAACGTATGAGCAGACACCTGTGCGGCATTACAATG
TGAACCAGTCAATGTGAATTGCCTTGAAGAAGGTGACAGATGGTCACCGA
AACGTCGATGGATTAAATCTATTGGTTGTGTAAAAAAAAATAGTCTTTTT
ATTCCGTGACTTACCAGCCTAATGAAACTTTTCATGGATGTGAGCAGATA
CACGTAACACATTCTGTGTGATGCTTCAGGCCAAGGCAATACATCTCGTG
AGTAGTTACTGGTTTTCATAAAGTTTCGGGACAAATCATTTTTGGTTCAA
CTCTGGGACCAAGTTTGCATGCAGAGTAAGTACACTGTGACTTTGCAATA
GATGGGTATGTAAGTATTTGATTTCGGACTAAACAAGTAGTGAGAAGTTA
AGATAAGTTTTTAAGCAACTTTAAAAATTCGCATTCTGTGTTGAGGAACA
TTAGATATTATAATAAACATTAAAAATCGCACTCATATATCCAATGAACG
GAGACTGGTGTCATATGCCTAACTAGTCTGTTGTCCGTGCGCTCCAATGG
CCAATACACATCCCAGTTTTGAAGGTGTCGTAAAGGTGTGAAGTGAACAA
GGTGTTAATGAGGCCCCCCATAGAGTTAATCCTCGCACGACCGTGTTTTA
GGGCCCGACCGTGTTTTAACTGAAGACCGTATTTTAACTGAAGACCGTAT
TTTAACTGAAGACCGTACTTTAACTATCGACCGTATTTTAACTAAAGACC
GTACTTTAACTAAAGACCGTATTTTAACTCAAGAC Coding sequence (CDS) from alignment at Sc0000208:440434..443368+ >transcript:BL79199_cuf5 ID=transcript:BL79199_cuf5|Name=transcript:BL79199_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=303bp|location=Sequence derived from alignment at Sc0000208:440434..443368+ (Branchiostoma lanceolatum)
TTTCCCCCTGAAGACAGAGAGGTGTTTGGCGTTCTATACTCTGTACTGAT
TCTGATATTTCCCCCTGAAGACAGAGAGGTGTTTGGCGTTCTATACTCTG
TACTGATTCTGATATTTCCTCCTGAAGACAGAGAGGTGTTTGGCGTTCTA
TACTCTGTACTGATTCTGATATTTCCTCCTGAAGACAGAGAGGTGTTTGG
CGTTCTATACTCTGTACTTATTCTGCTCTTTCTCCCTGAAGACAGAGAGG
TGTTTGGCGTTCTATACTCTGTATTGATTCTAGATCTGCTCTTTCTCCCT
TAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000208 | genome | Sc0000208:440434..443368 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79199_cuf5 |
| Biotype | protein_coding |
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