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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL79123_cuf1 >transcript:BL79123_cuf1-protein ID=transcript:BL79123_cuf1-protein|Name=transcript:BL79123_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=99bp
RFTVALSCNTYTQDWSKWAFRQDSSSSDSDEEERIVITKKPPPRRRKFNM
NASGAKTGNIYMGRVKDLFSVNMATLSHKHDSGEMLDFEYFTRYKIQLC Run BLAST on NCBI mRNA from alignment at xfSc0003981:694..1717+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL79123_cuf1 ID=transcript:BL79123_cuf1|Name=transcript:BL79123_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1024bp|location=Sequence derived from alignment at xfSc0003981:694..1717+ (Branchiostoma lanceolatum)
CTCGCTTTACAGTAGCTCTTAGTTGTAACACGTATACTCAAGATTGGTCA
AAATGGGTGAGCACATTATCGATCTACATAATCAACCATCTTTGTCATCA
AGCATGATATTGTTTTAGTACTGTAACACAGCTTTGTTTTCAGTTTCAGT
CCCAGTCATAAGGTATTGTTTGTTGGTAAACATGTTCATATCAGAATCAG
ATACAGTATACCGGATCCAGCATAATTGTGTCTATGCAGAGGGACTATGC
TATGGTTCATTGTACAGAAGCTGACTTAGTGATAGAAGCTAGGTAAAGCA
TTACTTCAATTGTTAGTATCTATTATAAGTTTTAGTTTTTTCATAGACAA
AAAAACATCCCATTATGAAAATGCCTGAGGTAAGAATTACTAGAGATTCC
TTCAAAATCTTGCTTTGAAATATGGTGTTGCTTTTTAGTTAAAAAACAAA
CAAATTATAAACTTTATACAATTGTATCTTCTTTGTTTTCCAAGGCTTTC
CGCCAAGACAGCAGTTCTAGTGACAGTGATGAGGAGGAGAGGATTGTCAT
CACTAAGAAGCCACCTCCAAGAAGAAGGAAGTTCAACATGAATGCCAGCG
GCGCCAAGACTGGCAACATCTACATGGGCCGAGTGAAGGACCTGTTTTCT
GTAAACATGGCCACTCTTTCACACAAACATGATTCTGGTGAGATGCTAGA
CTTTGAGTATTTTACAAGATACAAGATACAACTTTGCTGAAATGTGCAGG
GCTTGAAATACTCGGTAACAGCGTGCATATGCCGGTGGTTAGTGACCCTG
CCTGTGGACCAAGAAGCTAGAAGGCTACAGTCCTTAGGAGGGGACGTTAA
GCTGTTCATTTTGCTTGTAGAAAAGAGGTAGCAGGGTGTTTCCCAATAGG
ATTAACAATTATTATAGTCCTTTAGGAGCCCCCTGCAAAAGTAGGGGTCT
AATTTCCTTGTTTTCTTAGCATAGGGTTAGACATTAAACTGGATAATTAG
TGAGTGAGTGAGTGAGTGAGTGAG Coding sequence (CDS) from alignment at xfSc0003981:694..1717+ >transcript:BL79123_cuf1 ID=transcript:BL79123_cuf1|Name=transcript:BL79123_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=600bp|location=Sequence derived from alignment at xfSc0003981:694..1717+ (Branchiostoma lanceolatum)
CGCTTTACAGTAGCTCTTAGTTGTAACACGTATACTCAAGATTGGTCAAA
ATGGGCTTTCCGCCAAGACAGCAGTTCTAGTGACAGTGATGAGGAGGAGA
GGATTGTCATCACTAAGAAGCCACCTCCAAGAAGAAGGAAGTTCAACATG
AATGCCAGCGGCGCCAAGACTGGCAACATCTACATGGGCCGAGTGAAGGA
CCTGTTTTCTGTAAACATGGCCACTCTTTCACACAAACATGATTCTGGTG
AGATGCTAGACTTTGAGTATTTTACAAGATACAAGATACAACTTTGCTGA
CGCTTTACAGTAGCTCTTAGTTGTAACACGTATACTCAAGATTGGTCAAA
ATGGGCTTTCCGCCAAGACAGCAGTTCTAGTGACAGTGATGAGGAGGAGA
GGATTGTCATCACTAAGAAGCCACCTCCAAGAAGAAGGAAGTTCAACATG
AATGCCAGCGGCGCCAAGACTGGCAACATCTACATGGGCCGAGTGAAGGA
CCTGTTTTCTGTAAACATGGCCACTCTTTCACACAAACATGATTCTGGTG
AGATGCTAGACTTTGAGTATTTTACAAGATACAAGATACAACTTTGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0003981 | genome | xfSc0003981:694..1717 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL79123_cuf1 |
| Biotype | protein_coding |
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