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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL78943_cuf0 >transcript:BL78943_cuf0-protein ID=transcript:BL78943_cuf0-protein|Name=transcript:BL78943_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=343bp
VPTCTQIVTTAEFVSTTLPETTIVVLTTAPTTTLPETTLTETAVLTTTTA
PKTTVPETTLLETTVTETTIMTTTTAPTTTLPDTTLTETTVMTTTTEPQT
TMLDTTLPETTLPDTTLPDTTAMTTTIEPPTTMLETTLPETTLPETTLPE
TTLPDTTMPDTTLPETTLPDTTLPDTTMPDTALPETRMPETTLPETTLSG
TTLPDTTLPETTLPETTLLETPLPDTTLPDTTLPETTLPETTLLETPLPD
TTLPKTTLPDTTLPETTLPDTTLPGTTLPDTTLPEKTIVATTTTEPTTTV
LKTMLPVTTVVTTPAEPTTAVPETTLAITTGMTTTTEILTTVP Run BLAST on NCBI mRNA from alignment at Sc0000002:8344974..8346260+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL78943_cuf0 ID=transcript:BL78943_cuf0|Name=transcript:BL78943_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1287bp|location=Sequence derived from alignment at Sc0000002:8344974..8346260+ (Branchiostoma lanceolatum)
CTGTTCCAACTTGCACGCGTAAGATGCGTTTCAAAAGTCTACTTCATAAA
AAAGGGCCATTCCATTTTGTGTCATGTAAGTGGTCATCAGGACCCGCTAC
TGTGCATTTCTTTCCTGTAATGACAGTCGTGTCTATTCCACAGTTACTCT
ACATGTTGGAATACTTGCATTGTGCCTTGTGTCATGTTTTGTACTTTACC
ATTCAGCTTAGGAAAGGTGCATTGTGCCCCGATGGTCGGTGATCATAGAC
TAATCTATTCTATTCCTCTCATAGAAATCGTTACAACGGCGGAGTTTGTC
TCTACCACGCTGCCGGAAACCACCATCGTGGTACTGACTACAGCGCCCAC
AACAACACTACCAGAAACAACGCTAACGGAGACAGCTGTCTTGACAACGA
CTACAGCGCCCAAAACAACGGTGCCGGAAACAACTCTTCTGGAAACAACG
GTAACAGAAACGACTATTATGACAACGACTACAGCACCCACAACAACGCT
ACCGGACACAACGCTAACGGAGACAACTGTCATGACAACGACTACTGAAC
CCCAAACAACGATGCTGGACACAACGCTACCGGAGACAACGCTACCTGAC
ACAACGCTACCGGACACAACTGCCATGACAACGACTATTGAACCCCCAAC
AACGATGCTTGAAACAACGCTACCGGAGACAACGTTACCAGAGACAACGC
TACCAGAGACAACGCTACCGGATACAACGATGCCGGACACAACGCTACCA
GAGACAACGCTACCGGACACAACGCTACCGGATACAACGATGCCGGACAC
AGCGCTACCGGAAACAAGGATGCCAGAGACAACGCTACCAGAGACAACGC
TATCGGGTACAACGCTACCGGACACAACGCTACCGGAGACAACGCTACCA
GAGACAACGCTGCTTGAAACACCGCTACCGGACACAACGCTACCGGACAC
AACGCTACCGGAGACAACGCTACCAGAGACAACGCTGCTTGAAACACCGC
TACCAGACACAACGCTACCGAAGACAACGCTACCGGACACAACGCTACCG
GAGACAACGCTACCGGACACAACGCTACCGGGCACTACGCTACCGGACAC
AACGCTACCGGAGAAAACTATCGTGGCAACGACGACTACAGAGCCAACAA
CAACGGTGCTGAAAACCATGCTACCGGTTACAACTGTCGTCACCACGCCT
GCAGAGCCCACAACAGCTGTACCGGAAACCACGCTAGCGATAACAACTGG
CATGACGACGACTACAGAGATCTTGACAACGGTGCCG Coding sequence (CDS) from alignment at Sc0000002:8344974..8346260+ >transcript:BL78943_cuf0 ID=transcript:BL78943_cuf0|Name=transcript:BL78943_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2058bp|location=Sequence derived from alignment at Sc0000002:8344974..8346260+ (Branchiostoma lanceolatum)
GTTCCAACTTGCACGCAAATCGTTACAACGGCGGAGTTTGTCTCTACCAC
GCTGCCGGAAACCACCATCGTGGTACTGACTACAGCGCCCACAACAACAC
TACCAGAAACAACGCTAACGGAGACAGCTGTCTTGACAACGACTACAGCG
CCCAAAACAACGGTGCCGGAAACAACTCTTCTGGAAACAACGGTAACAGA
AACGACTATTATGACAACGACTACAGCACCCACAACAACGCTACCGGACA
CAACGCTAACGGAGACAACTGTCATGACAACGACTACTGAACCCCAAACA
ACGATGCTGGACACAACGCTACCGGAGACAACGCTACCTGACACAACGCT
ACCGGACACAACTGCCATGACAACGACTATTGAACCCCCAACAACGATGC
TTGAAACAACGCTACCGGAGACAACGTTACCAGAGACAACGCTACCAGAG
ACAACGCTACCGGATACAACGATGCCGGACACAACGCTACCAGAGACAAC
GCTACCGGACACAACGCTACCGGATACAACGATGCCGGACACAGCGCTAC
CGGAAACAAGGATGCCAGAGACAACGCTACCAGAGACAACGCTATCGGGT
ACAACGCTACCGGACACAACGCTACCGGAGACAACGCTACCAGAGACAAC
GCTGCTTGAAACACCGCTACCGGACACAACGCTACCGGACACAACGCTAC
CGGAGACAACGCTACCAGAGACAACGCTGCTTGAAACACCGCTACCAGAC
ACAACGCTACCGAAGACAACGCTACCGGACACAACGCTACCGGAGACAAC
GCTACCGGACACAACGCTACCGGGCACTACGCTACCGGACACAACGCTAC
CGGAGAAAACTATCGTGGCAACGACGACTACAGAGCCAACAACAACGGTG
CTGAAAACCATGCTACCGGTTACAACTGTCGTCACCACGCCTGCAGAGCC
CACAACAGCTGTACCGGAAACCACGCTAGCGATAACAACTGGCATGACGA
CGACTACAGAGATCTTGACAACGGTGCCGGTTCCAACTTGCACGCAAATC
GTTACAACGGCGGAGTTTGTCTCTACCACGCTGCCGGAAACCACCATCGT
GGTACTGACTACAGCGCCCACAACAACACTACCAGAAACAACGCTAACGG
AGACAGCTGTCTTGACAACGACTACAGCGCCCAAAACAACGGTGCCGGAA
ACAACTCTTCTGGAAACAACGGTAACAGAAACGACTATTATGACAACGAC
TACAGCACCCACAACAACGCTACCGGACACAACGCTAACGGAGACAACTG
TCATGACAACGACTACTGAACCCCAAACAACGATGCTGGACACAACGCTA
CCGGAGACAACGCTACCTGACACAACGCTACCGGACACAACTGCCATGAC
AACGACTATTGAACCCCCAACAACGATGCTTGAAACAACGCTACCGGAGA
CAACGTTACCAGAGACAACGCTACCAGAGACAACGCTACCGGATACAACG
ATGCCGGACACAACGCTACCAGAGACAACGCTACCGGACACAACGCTACC
GGATACAACGATGCCGGACACAGCGCTACCGGAAACAAGGATGCCAGAGA
CAACGCTACCAGAGACAACGCTATCGGGTACAACGCTACCGGACACAACG
CTACCGGAGACAACGCTACCAGAGACAACGCTGCTTGAAACACCGCTACC
GGACACAACGCTACCGGACACAACGCTACCGGAGACAACGCTACCAGAGA
CAACGCTGCTTGAAACACCGCTACCAGACACAACGCTACCGAAGACAACG
CTACCGGACACAACGCTACCGGAGACAACGCTACCGGACACAACGCTACC
GGGCACTACGCTACCGGACACAACGCTACCGGAGAAAACTATCGTGGCAA
CGACGACTACAGAGCCAACAACAACGGTGCTGAAAACCATGCTACCGGTT
ACAACTGTCGTCACCACGCCTGCAGAGCCCACAACAGCTGTACCGGAAAC
CACGCTAGCGATAACAACTGGCATGACGACGACTACAGAGATCTTGACAA
CGGTGCCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:8344974..8346260 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL78943_cuf0 |
| Biotype | protein_coding |
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