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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL78870_cuf0 >transcript:BL78870_cuf0-protein ID=transcript:BL78870_cuf0-protein|Name=transcript:BL78870_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=261bp
IDDAATGALSFALKYVDDMNFLETRTLHVPSCLQNDLDELNSWTRKNHML
LNGTKCLAMHITFCRNPPPFPTLQIDSSTLSAVPCLKILGLRIQKDLRWN
EQVSYMSAQAARKLFILKRLRKFNLSPEELLTIYIGYIRPLLEYAVPIWN
PGLTHRQRDQLERIQRRACRIILGRAYPGYAEALTQLGLTTLSERRERLC
LKFGRSLLGSEFEHWLPCRRSEISGRRTRNGHKLNIPRANTLRFSNSPIP
YLTKLLNQYGC Run BLAST on NCBI mRNA from alignment at Sc0000114:357658..358651+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL78870_cuf0 ID=transcript:BL78870_cuf0|Name=transcript:BL78870_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=994bp|location=Sequence derived from alignment at Sc0000114:357658..358651+ (Branchiostoma lanceolatum)
GATAGATGACGCTGCAACTGGCGCACTCAGTTTTGCTTTGAAATATGTAG
ATGATATGAACTTCCTGGAAACAAGAACGCTCCATGTCCCCTCCTGTCTG
CAAAATGACCTAGACGAGCTAAACTCTTGGACAAGGAAAAACCACATGCT
TTTGAATGGTACCAAGTGTCTAGCAATGCACATTACGTTCTGCAGGAACC
CGCCACCGTTCCCTACATTGCAAATCGACTCCTCAACTCTGTCTGCTGTG
CCTTGTTTAAAAATACTTGGTCTCCGCATTCAGAAAGACCTACGTTGGAA
TGAGCAAGTCAGTTACATGTCAGCGCAAGCCGCAAGAAAACTGTTCATTC
TCAAGCGACTCAGAAAGTTCAACCTCTCACCTGAAGAACTACTTACCATC
TATATAGGGTACATTAGACCCCTCCTCGAATATGCTGTCCCCATTTGGAA
TCCCGGACTTACACATCGCCAAAGGGACCAGCTGGAGAGAATTCAGAGAA
GAGCCTGCCGTATCATCCTCGGCAGAGCCTACCCTGGATATGCGGAGGCA
CTGACTCAGCTGGGTCTCACCACCCTGTCTGAAAGGCGCGAGAGACTGTG
TTTGAAGTTTGGCAGATCCCTGCTAGGTTCCGAATTCGAACACTGGTTGC
CTTGTAGAAGATCTGAAATCTCGGGTAGACGCACTCGTAATGGGCACAAA
CTGAACATTCCTAGGGCAAATACGCTGAGATTCAGTAACTCGCCGATTCC
GTACCTCACGAAATTGCTCAACCAGTATGGTTGCTGAATCTCGGTGTGTT
TGCCTTGGGAATGCTCTGTTCAGTAACTAGTATCTTTTTCTGCGCCATAT
TTGCCGATTTTTTGAAGAAACAATATTGTCTACTATGTGTATTATGTATA
AGATTTTATATGCGCACGAGATTTTATGTACGTCGACAGCAGTGGAACTT
ACTGTACATTGGTTTTTAATTCAGTGTATGTGAACTGCGATAAA Coding sequence (CDS) from alignment at Sc0000114:357658..358651+ >transcript:BL78870_cuf0 ID=transcript:BL78870_cuf0|Name=transcript:BL78870_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=786bp|location=Sequence derived from alignment at Sc0000114:357658..358651+ (Branchiostoma lanceolatum)
ATAGATGACGCTGCAACTGGCGCACTCAGTTTTGCTTTGAAATATGTAGA
TGATATGAACTTCCTGGAAACAAGAACGCTCCATGTCCCCTCCTGTCTGC
AAAATGACCTAGACGAGCTAAACTCTTGGACAAGGAAAAACCACATGCTT
TTGAATGGTACCAAGTGTCTAGCAATGCACATTACGTTCTGCAGGAACCC
GCCACCGTTCCCTACATTGCAAATCGACTCCTCAACTCTGTCTGCTGTGC
CTTGTTTAAAAATACTTGGTCTCCGCATTCAGAAAGACCTACGTTGGAAT
GAGCAAGTCAGTTACATGTCAGCGCAAGCCGCAAGAAAACTGTTCATTCT
CAAGCGACTCAGAAAGTTCAACCTCTCACCTGAAGAACTACTTACCATCT
ATATAGGGTACATTAGACCCCTCCTCGAATATGCTGTCCCCATTTGGAAT
CCCGGACTTACACATCGCCAAAGGGACCAGCTGGAGAGAATTCAGAGAAG
AGCCTGCCGTATCATCCTCGGCAGAGCCTACCCTGGATATGCGGAGGCAC
TGACTCAGCTGGGTCTCACCACCCTGTCTGAAAGGCGCGAGAGACTGTGT
TTGAAGTTTGGCAGATCCCTGCTAGGTTCCGAATTCGAACACTGGTTGCC
TTGTAGAAGATCTGAAATCTCGGGTAGACGCACTCGTAATGGGCACAAAC
TGAACATTCCTAGGGCAAATACGCTGAGATTCAGTAACTCGCCGATTCCG
TACCTCACGAAATTGCTCAACCAGTATGGTTGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000114 | genome | Sc0000114:357658..358651 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL78870_cuf0 |
| Biotype | protein_coding |
|
