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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL78869_cuf0 >transcript:BL78869_cuf0-protein ID=transcript:BL78869_cuf0-protein|Name=transcript:BL78869_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=325bp
GAILLTIHFTLLIVNPEHHPSLFTPRHEGTSHTLNKTINSPLPLTTLLDI
RHAIHPSKLALVSIFINSKDKLAPHRRPKLTLFCITLIILLSGDVELNPG
PRAPKYPCGVCHQAVGWETVSGRHAICCDSCDVWYHTDCMGMSTPVYNTI
NNPNVSWICCSCGLPNFSSSLFNSTVFETSNCFSSFDTSTCSSPARSIGS
PIATSSPISHNVTQPPRDRTHTKPVRTCVVNFRSIRNKIPELHAFCEAVQ
PDIFVGTETWLDSSVGSSEVFSDTFNVFRRDRAGRGGGVLVAVKNNIIAT
HHPEPECPCELTWVQVQLANSKSIY Run BLAST on NCBI mRNA from alignment at Sc0000573:28522..29498+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL78869_cuf0 ID=transcript:BL78869_cuf0|Name=transcript:BL78869_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=977bp|location=Sequence derived from alignment at Sc0000573:28522..29498+ (Branchiostoma lanceolatum)
GGGCGCCATTTTACTTACCATCCACTTCACTTTGTTAATTGTAAATCCGG
AACACCATCCCTCCCTCTTCACTCCAAGGCATGAAGGTACATCTCACACC
CTTAACAAGACCATTAACAGTCCTCTCCCATTAACCACCTTGCTGGACAT
CAGACATGCCATTCACCCCTCCAAGCTTGCACTAGTTTCTATTTTTATAA
ACTCTAAGGATAAACTGGCACCCCACCGCAGACCTAAACTCACCCTTTTT
TGTATCACCCTCATAATACTTCTGTCTGGAGATGTGGAGTTGAATCCAGG
ACCTAGGGCACCGAAGTACCCCTGCGGCGTATGCCATCAAGCTGTCGGGT
GGGAAACGGTCAGTGGCCGGCATGCCATCTGTTGCGACTCATGCGATGTC
TGGTACCATACTGACTGCATGGGTATGTCAACACCGGTCTACAATACCAT
CAATAACCCTAATGTGTCCTGGATTTGCTGCTCTTGCGGCCTACCCAACT
TCAGCTCCAGTCTTTTTAACTCTACAGTCTTTGAAACATCTAATTGTTTT
TCCTCTTTCGACACCAGCACCTGTTCCAGTCCAGCAAGATCTATAGGCTC
CCCTATCGCTACCTCTTCGCCTATTAGTCACAACGTTACCCAACCACCTC
GTGACCGCACACACACCAAACCAGTCAGGACCTGTGTTGTCAACTTTAGA
TCCATTCGCAACAAGATACCTGAACTGCATGCATTTTGCGAAGCTGTGCA
ACCAGACATTTTTGTTGGCACTGAGACATGGTTGGACTCGTCAGTGGGCA
GCAGTGAAGTCTTTTCGGACACGTTCAATGTGTTCAGGAGAGACCGAGCT
GGCCGGGGAGGGGGTGTGCTTGTTGCTGTAAAGAACAACATCATTGCAAC
CCACCACCCTGAACCGGAATGTCCCTGCGAGTTAACGTGGGTCCAGGTCC
AGCTGGCTAACAGTAAGTCCATTTACA Coding sequence (CDS) from alignment at Sc0000573:28522..29498+ >transcript:BL78869_cuf0 ID=transcript:BL78869_cuf0|Name=transcript:BL78869_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=975bp|location=Sequence derived from alignment at Sc0000573:28522..29498+ (Branchiostoma lanceolatum)
GGCGCCATTTTACTTACCATCCACTTCACTTTGTTAATTGTAAATCCGGA
ACACCATCCCTCCCTCTTCACTCCAAGGCATGAAGGTACATCTCACACCC
TTAACAAGACCATTAACAGTCCTCTCCCATTAACCACCTTGCTGGACATC
AGACATGCCATTCACCCCTCCAAGCTTGCACTAGTTTCTATTTTTATAAA
CTCTAAGGATAAACTGGCACCCCACCGCAGACCTAAACTCACCCTTTTTT
GTATCACCCTCATAATACTTCTGTCTGGAGATGTGGAGTTGAATCCAGGA
CCTAGGGCACCGAAGTACCCCTGCGGCGTATGCCATCAAGCTGTCGGGTG
GGAAACGGTCAGTGGCCGGCATGCCATCTGTTGCGACTCATGCGATGTCT
GGTACCATACTGACTGCATGGGTATGTCAACACCGGTCTACAATACCATC
AATAACCCTAATGTGTCCTGGATTTGCTGCTCTTGCGGCCTACCCAACTT
CAGCTCCAGTCTTTTTAACTCTACAGTCTTTGAAACATCTAATTGTTTTT
CCTCTTTCGACACCAGCACCTGTTCCAGTCCAGCAAGATCTATAGGCTCC
CCTATCGCTACCTCTTCGCCTATTAGTCACAACGTTACCCAACCACCTCG
TGACCGCACACACACCAAACCAGTCAGGACCTGTGTTGTCAACTTTAGAT
CCATTCGCAACAAGATACCTGAACTGCATGCATTTTGCGAAGCTGTGCAA
CCAGACATTTTTGTTGGCACTGAGACATGGTTGGACTCGTCAGTGGGCAG
CAGTGAAGTCTTTTCGGACACGTTCAATGTGTTCAGGAGAGACCGAGCTG
GCCGGGGAGGGGGTGTGCTTGTTGCTGTAAAGAACAACATCATTGCAACC
CACCACCCTGAACCGGAATGTCCCTGCGAGTTAACGTGGGTCCAGGTCCA
GCTGGCTAACAGTAAGTCCATTTAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000573 | genome | Sc0000573:28522..29498 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL78869_cuf0 |
| Biotype | protein_coding |
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