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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL78850_cuf0 >transcript:BL78850_cuf0-protein ID=transcript:BL78850_cuf0-protein|Name=transcript:BL78850_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=281bp
EHQILNKFQSGFRPAHSTATTLIHVTDTILDNMEKGLFTGAVFLDLKKAF
DTVCHTILLDKLRISDFQDTELTWFRSYLNDKQQTTVVNGVSSDFMNISV
GVPQGSVLGPLLFILYISDMPDVLQHGKVVLYADDTALFYASSTISDVNR
ALNQDLRSIEIWLESNKLTLNVKKCKAMLFGTRAKLRLGKDQLTAILSGT
CLEVVSSFKYLGVWLDSCLTWQDHIDKLCNGVSARLGVLRRLTQVLPQCT
LEMLFNCMILPKLDYCDVVWXNVPLRCYSTV Run BLAST on NCBI mRNA from alignment at Sc0000190:429252..430737- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL78850_cuf0 ID=transcript:BL78850_cuf0|Name=transcript:BL78850_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1486bp|location=Sequence derived from alignment at Sc0000190:429252..430737- (Branchiostoma lanceolatum)
CGAACATCAGATACTTAACAAATTTCAGTCAGGTTTTAGACCCGCTCATT
CTACAGCAACAACATTGATCCATGTCACTGACACTATTCTTGACAACATG
GAGAAGGGACTCTTTACCGGTGCAGTCTTTCTTGATTTAAAGAAGGCCTT
CGACACGGTATGTCACACGATCCTTCTCGATAAGTTAAGAATAAGTGATT
TCCAAGACACAGAACTGACATGGTTCCGCTCCTACTTAAACGACAAACAG
CAGACCACAGTGGTAAATGGGGTCTCAAGTGATTTCATGAACATCTCGGT
GGGAGTCCCCCAAGGGTCTGTACTGGGACCGTTACTATTTATTCTTTATA
TCAGCGACATGCCTGATGTCCTACAGCATGGAAAAGTAGTACTGTATGCA
GACGACACTGCACTGTTCTATGCGTCCAGTACAATCAGTGATGTAAATAG
AGCACTGAACCAAGATCTCCGAAGTATAGAAATATGGCTAGAATCAAACA
AACTAACTTTAAATGTGAAGAAGTGTAAAGCCATGCTTTTTGGCACTAGG
GCGAAGCTGCGACTAGGTAAAGACCAACTGACAGCAATTCTTTCTGGCAC
ATGTTTGGAAGTTGTCTCCAGCTTTAAATATCTCGGTGTCTGGCTTGACT
CGTGTCTAACATGGCAAGATCACATAGATAAGTTATGCAATGGTGTGTCG
GCGAGACTGGGTGTCTTGCGGCGCCTTACCCAAGTTTTGCCACAATGTAC
CCTTGAGATGCTATTCAACTGTATGATCCTGCCCAAACTGGACTACTGTG
ATGTAGTGTGGAGNAATGTACCCTTGAGATGCTATTCAACTGTATGATCC
TGCCCAAACTGGACTATTGTGATGTAGTGTGGGGTAACTGTGGTAAAGGC
CTCTTAGATAAGATACAAAAGCTACACAATCGGGCTGCTAGAATTATACT
TGGGCTGTCATATGTATCTCACATTGGTAATACTGAACTCTCAAGTCTAC
ATTGGAAAACCTTAGCAACTAGGAGAAATGAGCACCTGCTACGAACAGTT
TATAAGTCTGTTCACCAACAACTGCCAGAATATCTCAACGTCTTTCAGAT
GGTATCGGAGTATCATAACTATCCCACACGCCACAGTCTAAATCGATCTA
TGCAACTGCCTCAGACACGTCTGGAATGTGGAAGGCGAAAGTTCAGCCAC
AGAGGTGTTGGTGAATGGAACAAGCTACCACTTTCAATGAAAAATGCTCC
AAACAGTGTAACGTTTAAGAGGATGTTGAAACAAATGAACTGACCTCTGA
CCTCACCTTACGATGGGAACGGAATATAGACTACGAGTATGGATTATGGC
TCTGTAAATTTTGTATGTATCGGTGTATATGTATTTTAGACTTATGTTTT
GTACTGATTGTATTGTGTTATCCAGGGCCCCACTGCAAAGCAGTGTATAG
TGCACTGAGTTGGGCCACCCTGGCTAAATAAAACAG Coding sequence (CDS) from alignment at Sc0000190:429252..430737- >transcript:BL78850_cuf0 ID=transcript:BL78850_cuf0|Name=transcript:BL78850_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=846bp|location=Sequence derived from alignment at Sc0000190:429252..430737- (Branchiostoma lanceolatum)
GAACATCAGATACTTAACAAATTTCAGTCAGGTTTTAGACCCGCTCATTC
TACAGCAACAACATTGATCCATGTCACTGACACTATTCTTGACAACATGG
AGAAGGGACTCTTTACCGGTGCAGTCTTTCTTGATTTAAAGAAGGCCTTC
GACACGGTATGTCACACGATCCTTCTCGATAAGTTAAGAATAAGTGATTT
CCAAGACACAGAACTGACATGGTTCCGCTCCTACTTAAACGACAAACAGC
AGACCACAGTGGTAAATGGGGTCTCAAGTGATTTCATGAACATCTCGGTG
GGAGTCCCCCAAGGGTCTGTACTGGGACCGTTACTATTTATTCTTTATAT
CAGCGACATGCCTGATGTCCTACAGCATGGAAAAGTAGTACTGTATGCAG
ACGACACTGCACTGTTCTATGCGTCCAGTACAATCAGTGATGTAAATAGA
GCACTGAACCAAGATCTCCGAAGTATAGAAATATGGCTAGAATCAAACAA
ACTAACTTTAAATGTGAAGAAGTGTAAAGCCATGCTTTTTGGCACTAGGG
CGAAGCTGCGACTAGGTAAAGACCAACTGACAGCAATTCTTTCTGGCACA
TGTTTGGAAGTTGTCTCCAGCTTTAAATATCTCGGTGTCTGGCTTGACTC
GTGTCTAACATGGCAAGATCACATAGATAAGTTATGCAATGGTGTGTCGG
CGAGACTGGGTGTCTTGCGGCGCCTTACCCAAGTTTTGCCACAATGTACC
CTTGAGATGCTATTCAACTGTATGATCCTGCCCAAACTGGACTACTGTGA
TGTAGTGTGGAGNAATGTACCCTTGAGATGCTATTCAACTGTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000190 | genome | Sc0000190:429252..430737 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL78850_cuf0 |
| Biotype | protein_coding |
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