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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL78775_cuf0 >transcript:BL78775_cuf0-protein ID=transcript:BL78775_cuf0-protein|Name=transcript:BL78775_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=390bp
MIEEWTEAMDSGEIVGCVFLDLRKAFDKVWHAGLLSKLRAYGISGSMHNW
FSSYLSERRQRVVIQGVASDWKSPLAGVPQGSVLGPTLFILYINDLASSC
IQSQPNLFADDTSLSSSHHSIQHVVASLNRDLSSVSTWLSQWKLEANIDK
CKAMFITTRAIPRPIPPVTLGGTVLQVVTSHKHLGVTLTNTLSWSNHIDI
ISTKARRSSGLLCALRKNIPKDLLLRLYMTIVRPNLEYADIVWSGLTKRD
QRTVESVQYQTTRIISGHFGLPYPSYESLYTELSLPSLQYRRKFHTTVTL
YRLLNGRCPPHLQSLLPQTRAPDTNSRYPLRNSEHLTTPTCKTTRSQRTF
ISRAISLWNSLPSNIRTSLTVSSFKNKLCTSLGNKYSVNN Run BLAST on NCBI mRNA from alignment at Sc0000299:121539..123466- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL78775_cuf0 ID=transcript:BL78775_cuf0|Name=transcript:BL78775_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1928bp|location=Sequence derived from alignment at Sc0000299:121539..123466- (Branchiostoma lanceolatum)
GTCATTTTGACGTCAACGTAGTTACCATTTACGTAATATGTCTTGGTATA
CCTTAAAATTAACAATACATACTATTTTGTTTAATACCTTTAGATATTGC
GGGAATTCCCTATTTAGCCACCTCCTNGCCTAGTAGCAGATCCTATATCA
GGACCTCTAACTCAGCTATACAACAAGTCCCTCCTCCTTGGACAAGTTCC
TTCGGGGTGGAAAAAAGCAAACGTTACCCCCATCCACAAAGCCGGAAACC
GACACCTAACAAACAACTACAGGCCTATATCCCTACTTAGCATTGTATCA
AAGGTTCTAGAAACCCTTGTCAACAAACGTCTAACGGCACATGTCAATCC
AATACTGACAGATCACCAAAGCGGATTCAGACCTCTTGACAACACTACGC
TACAGCTGGCTCGAATGATAGAGGAATGGACTGAAGCCATGGATAGCGGA
GAGATAGTGGGATGCGTGTTCCTTGACCTTCGAAAAGCATTTGACAAGGT
CTGGCACGCAGGACTGCTATCCAAACTAAGAGCGTATGGAATCAGTGGAT
CCATGCACAACTGGTTTTCCAGCTACCTGTCCGAGAGACGCCAACGAGTG
GTCATCCAGGGAGTGGCATCAGACTGGAAGTCTCCCCTAGCCGGCGTACC
ACAGGGTTCTGTCCTCGGACCAACGCTTTTCATACTCTATATCAACGACC
TTGCCTCTAGCTGTATACAATCCCAACCAAATTTATTCGCCGACGACACT
TCACTGTCCTCCTCCCATCACTCTATCCAACATGTAGTTGCATCACTGAA
CAGAGACCTGAGCTCTGTGTCTACCTGGCTGTCTCAATGGAAACTTGAAG
CCAACATAGACAAGTGTAAAGCTATGTTCATCACGACACGCGCCATTCCA
CGACCGATTCCTCCCGTGACCCTAGGTGGAACCGTATTGCAAGTTGTCAC
CAGCCATAAACACCTCGGCGTTACTCTCACAAATACCCTCTCCTGGTCAA
ACCATATCGACATCATCTCTACAAAGGCTAGACGATCTTCTGGTTTGCTA
TGTGCTCTGAGGAAGAATATACCGAAGGACCTACTCCTTAGACTATACAT
GACAATCGTAAGGCCAAACCTCGAGTATGCAGACATTGTCTGGTCTGGTC
TTACCAAACGCGACCAAAGGACTGTGGAATCTGTCCAATACCAGACTACC
AGAATCATCAGTGGACACTTCGGGCTACCGTATCCTTCCTACGAAAGTCT
CTACACCGAACTATCACTACCATCACTCCAGTACCGACGCAAGTTCCACA
CAACTGTGACTCTCTACAGACTCTTGAATGGACGCTGCCCTCCACATCTC
CAGAGTTTGCTACCCCAAACACGTGCGCCTGATACCAACTCCCGCTATCC
CCTAAGGAACAGTGAACACCTGACTACTCCAACGTGCAAAACTACCAGAT
CTCAGAGAACATTCATTAGTCGAGCGATCTCACTCTGGAACTCTCTTCCC
AGTAATATCCGCACATCTCTCACTGTCAGCTCCTTCAAAAACAAACTCTG
TACATCACTCGGCAACAAATACTCTGTAAATAATTGACTGACCTACCACA
AGTATTAGATGACATGTTGTATAATCTGCTAACCTAGTATGTAATATAAA
CCTAAGTTTTGGCTTGACATTGTTAACGATTTATATATAGCTTAGTCTTG
TGCATTTTTTTTTCCATATGCGCTTCAGTCTTGTGATGATTTTTGTTAAT
TTTGTTTCTTCGATGTAATTTTACTTTGTGTTCTGTGTCCGCCGCTATGT
GTGTGTTTGACGCATGCGCACTTTGTGAAAGTTTGTATTGAACTTTGAAT
ATACTGTTCCCAGGGCTAACCCTTTGTAATAGCCTTCGGCTAGTTGGGTA
GTCCTGGCTGTACTTTCCTACAGTCAAA Coding sequence (CDS) from alignment at Sc0000299:121539..123466- >transcript:BL78775_cuf0 ID=transcript:BL78775_cuf0|Name=transcript:BL78775_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1173bp|location=Sequence derived from alignment at Sc0000299:121539..123466- (Branchiostoma lanceolatum)
ATGATAGAGGAATGGACTGAAGCCATGGATAGCGGAGAGATAGTGGGATG
CGTGTTCCTTGACCTTCGAAAAGCATTTGACAAGGTCTGGCACGCAGGAC
TGCTATCCAAACTAAGAGCGTATGGAATCAGTGGATCCATGCACAACTGG
TTTTCCAGCTACCTGTCCGAGAGACGCCAACGAGTGGTCATCCAGGGAGT
GGCATCAGACTGGAAGTCTCCCCTAGCCGGCGTACCACAGGGTTCTGTCC
TCGGACCAACGCTTTTCATACTCTATATCAACGACCTTGCCTCTAGCTGT
ATACAATCCCAACCAAATTTATTCGCCGACGACACTTCACTGTCCTCCTC
CCATCACTCTATCCAACATGTAGTTGCATCACTGAACAGAGACCTGAGCT
CTGTGTCTACCTGGCTGTCTCAATGGAAACTTGAAGCCAACATAGACAAG
TGTAAAGCTATGTTCATCACGACACGCGCCATTCCACGACCGATTCCTCC
CGTGACCCTAGGTGGAACCGTATTGCAAGTTGTCACCAGCCATAAACACC
TCGGCGTTACTCTCACAAATACCCTCTCCTGGTCAAACCATATCGACATC
ATCTCTACAAAGGCTAGACGATCTTCTGGTTTGCTATGTGCTCTGAGGAA
GAATATACCGAAGGACCTACTCCTTAGACTATACATGACAATCGTAAGGC
CAAACCTCGAGTATGCAGACATTGTCTGGTCTGGTCTTACCAAACGCGAC
CAAAGGACTGTGGAATCTGTCCAATACCAGACTACCAGAATCATCAGTGG
ACACTTCGGGCTACCGTATCCTTCCTACGAAAGTCTCTACACCGAACTAT
CACTACCATCACTCCAGTACCGACGCAAGTTCCACACAACTGTGACTCTC
TACAGACTCTTGAATGGACGCTGCCCTCCACATCTCCAGAGTTTGCTACC
CCAAACACGTGCGCCTGATACCAACTCCCGCTATCCCCTAAGGAACAGTG
AACACCTGACTACTCCAACGTGCAAAACTACCAGATCTCAGAGAACATTC
ATTAGTCGAGCGATCTCACTCTGGAACTCTCTTCCCAGTAATATCCGCAC
ATCTCTCACTGTCAGCTCCTTCAAAAACAAACTCTGTACATCACTCGGCA
ACAAATACTCTGTAAATAATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000299 | genome | Sc0000299:121539..123466 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL78775_cuf0 |
| Biotype | protein_coding |
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