transcript:BL78669_cuf1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL78669_cuf1
Unique Nametranscript:BL78669_cuf1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL78669_cuf1

>transcript:BL78669_cuf1-protein ID=transcript:BL78669_cuf1-protein|Name=transcript:BL78669_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=1279bp
MRCHAVYTGTDIKYRYCLNLTIADNETLCDVAVFGTCLEPFLGISANGLK
SFLYEHLKTSKASTFNDPDSLLHKALQNSLVGLMFLFGFKVKCERSRSQR
ERHSPVRISNILEKSYQQRNGHHGKLPQLVAHQMVHANRDTPFVSVLDLL
KQILKTYTEDNKVREGSREFGVPRNTLPSRKSVSNSDISWCSTSSSRASF
GQSMSRVSLGQQSLVLSCDESGSESLISSSMSDDLQSEPMEKTDSIAHHS
SQDETYFEENLESESYRWQANDYRQNEVSDTDIVGIHEKMENRTCSATTH
GEINVNVEDNVDVPDEKHEGYNQEHSNTSRCENMSSQLLEGAFDETCWEG
ELPGNLCQKGQQKDHLSAIGDGEMEESAQKEQVKDKAMIDGMCYASTSTN
LDASDETRVDSDEIEVPYNPQYAEKGAGRPCEHDVTTSTEEEVLHENSGF
DESVNDSYLLLAELNDHDTASFAHFDDQNHDVCRRDGNPTHQHSSSSDDI
QHHVTKTSCDDLPYSEGLNTFIDQLDQPMQYPPERICQTGNYKVMADSNA
EDQNSKHDENMVQQEREISDASRSCTNLSEDNGLDMKQEPNTNVENVEED
KEMQAMWQEDFPYSEDLDAFLAEMDENITVESERKEEAGVFEEPVQQPIE
DEVVFSVETNIDIHPCRTETGSTCDMEGSRGNLSFLHTDKKGVNTDKKGR
TKSLFEQLVRRKTLVALDIAETSQTAEVLTKGKGTEKKESRKDTGEIDSE
RHSTSHDRDKIVSDSDSVLSVTSSVKQSSLERSDSAVSIPDSEKSQKSSG
KLPAGKSTVQSQSQDSMENAVFTTALVENHDFSILFDDSFGHLSDTESPD
SCRNSCGDAGGMNELPDTPAPPSRAASLARPSRTSTRSFNLVHTETAPVT
NNGKTTAATRMPTERNGACSTQIECSNLQPPLSNNLKTMAATRMPAACNG
ANPTQTECSTLHSAYSDCDSPDSSPNELADTPHDSRCRSFLSVRGMLSFN
STTDDGKCSDSAYSSSHTHLLPSDERKNISAEEPKQETQRRKSVHFSSHL
ESVHEISKLTGTKEVFDDYSVSKSVLKTLPTVSQYALPRKPACHKYRKSP
LQSIDNYGCDVQYEGTPELYSQRLMSDKKMVNSVTSYRMRTPMSNEGTPN
FFSQVSPTSADRRGGKSTRKKSVGTDSTPNFFSQFSPHDSGSEGIIPGTE
DRPCRKRVSCMLKNVISYPTDDTYQGTPDMFEASLHGGNECGDLGASPDL
FGDSPIPDSPANVRHTGVMSLCKRLFHRQ
Run BLAST on NCBI

mRNA from alignment at Sc0000104:607045..613694+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL78669_cuf1 ID=transcript:BL78669_cuf1|Name=transcript:BL78669_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=6650bp|location=Sequence derived from alignment at Sc0000104:607045..613694+ (Branchiostoma lanceolatum)
GGCGACAAGGCGATTTCTTCTCGATGTTCTTATCAAGATGGGATAGACAT ACGTTCTGCAGCTGTAAGTGTAACATACGGAAGATATAATATTCCCGTTT GTAGCTAACTGTTATGGGATAACAGGAAACGCGATGTGGTTAACTTCGTG TGTGGGGAGGGGGGCGGCTTTCAAGTTTCAGCTACTTTTGCTTCATAATT TTGAAGATTGACATCAAATTATATCAGCACCTTGTGACCACGTCTGTCAG AAGAATAGACATCAATACCTGTTAACAACAACTACAACTTCAATATCATA CTGGTGACTTAGCTTAGACCATTTTTGTGCCATACCTGCCTGTATGTTAT TTAATATTTATCTTTTAAGTGTGCCATACCTGCCTGTACAGTATTCTATG TTGTGTCTGGCTATTCAACTCAGTATCAAATGTTGAAAGGTCATCAATGC ATTGGGGAAGGAATATCACTTTTGCAGTCAAGATACTGTATCAAACAGAT AACAATTATACTGAAATAAACAATTTGATTTGTCTTGTATGCTTTTGAAT GACATTGTCATGCTTTCTGAGTTTCTCTTGATATTTTTTTATGAAAAGAA GTCAAAGATACCGTACTTAATACGAGAGGAACATATATTCTAAAGGAAGC GAGATATAACATTATAACATTTCTTTGCCAGGTCTATGGGAGAGTTCCGT TCCCTGGTGCTGGCGAAGGTGCTGTCCGTGAGAGACAGCAGCTGTTTGTA CCCCAGCTGTACCCACTGCTACTGCAAGCTGCATCTGCACACAGACAGTA ACAGGTAGGAGGAAAGTACCCAATCCTTGCTGATATTTAGATTAAGGTTA GAATGTTGCTGGCACAATATACATGTACAACACCTGGCAATGGCATTGGA CTGAAAAGTAAAATGAAAAGGAATCTTTAGTTTGTATGGAATTTGTGCAT TTTAACTATTTACCTTTTAAAACTGTCTGTCTAATTTCTGCTGTTAGTGT TAGCAAGCAAATGGTTGCATAGATGGACCTACAACAGGCATGACAGGGAA ATTTTGATTACAGTACAGTAAGATTAGTAATGTTATGTAAACGATATAGT TGCATCTGTATTTGCAGTCAGATGTGCAAAAGACAGGTGTGACAGGCCAT TCAGTCTACTATAAGTATAACCAGCTACTGCCAGCGCTGCGTGCCCGCAA AGCTGGTGTGTTACGCCAAAGGGCGGTTATACAGAAATATGATTGTGTCT TTTAATTTTTCGACTACTGTAATCTTTTTCCACAGGTATGAGTGCATGAG ATGCCACGCTGTGTACACAGGTACAGACATCAAGTACAGGTACTGCCTCA ATCTCACCATCGCAGACAACGAGACCTTGTGTGACGTTGCTGTGTTTGGG ACCTGTTTGGAACCTTTCCTGGGGATCAGTGCAAATGGACTCAAGAGGTG GGTTTTTCAAAAGAGATACATTTTTATGTCAATAAAGGTTAGACATACAG GTAATGAGATAGTCAATACAAAAGTTTCTCAAGCAGCGGGATAAGTTTTT AAAACAGATGTTTCAGACAGTATCCTCTGTGTCTCGTCAGTTCTCAGTCA CTGACGAATGACAGCAGATGCCGTCTGAAACATCTGACTGTTTTAGAATC CTTCTAGTTGCTTGAAGCATTGAGTAACTTTTGAATACATTTTGTTCTAT CTTGAAAACTGCTTTCTTAGACTCAAACTGGTTTGAGGAACAGGTCTTGA AATTAAGTCTTGAAATGGATGGAAAAAGTTTATAAAAATTCATGGGTTAA CTTACACTTACAGGCTATTGTTTTTTTTTTCAGATTCAGTTTTATTGATA TCGACTGGCATGTCACAATATGTTACATGAGATATGTCAAAATCTTAAAG AATGGCACCGTACTCTACCAATTACAAGCAGGAAAAATAAACATAACATT ATTGAATATGTGCTAAGGTATACATCATTAATCATCAGTGGAATCAGTTG GTCATCGTACTAGTACCTGAAAAGATACTGCCTGAATCGTCCAATTTGAT ATGAGGTCTGGTGTCTTTTACAATAATCTTTCAATTTTTCCCCTCAGTTT TCTTTATGAACATCTGAAAACAAGCAAGGCCTCAACATTCAATGATCCAG ACTCCCTCCTACACAAGGCACTACAGAATTCTCTCGTTGGATTGATGTTC CTATTTGGGTTCAAGGTTAAATGTGAAAGGTCAAGGTCACAGAGGGAGCG ACACTCGCCTGTCAGGATAAGCAACATCTTAGAGAAGAGCTACCAGCAGA GGAACGGGCACCACGGCAAATTACCTCAACTTGTGGCTCACCAGATGGTC CATGCCAATAGAGACACGCCGTTTGTAAGTGTGCTAGATTTGCTCAAACA GATTCTGAAAACCTACACTGAAGACAACAAAGTGAGAGAAGGTAGTAGAG AATTTGGTGTTCCTAGAAACACACTGCCATCCAGAAAGAGTGTGAGCAAC TCTGATATCTCATGGTGTTCAACCAGCAGTTCTAGAGCTTCGTTTGGACA GTCTATGTCAAGAGTGAGCCTCGGTCAGCAGTCGTTGGTTCTGAGCTGTG ATGAAAGTGGGAGTGAGAGTCTGATATCTTCCAGCATGTCGGATGACTTA CAGAGTGAACCAATGGAGAAAACTGACTCTATTGCCCACCACAGCTCTCA GGATGAGACATATTTTGAAGAAAACCTGGAAAGTGAGTCTTATAGATGGC AGGCAAATGACTATAGACAAAATGAGGTTTCTGATACTGATATAGTAGGT ATACATGAAAAAATGGAAAATAGAACATGCTCAGCAACCACACATGGTGA GATAAATGTCAATGTTGAGGACAATGTTGATGTGCCGGATGAAAAGCATG AAGGATATAATCAAGAGCACTCGAACACTAGCAGATGTGAGAATATGTCA TCTCAGCTCCTGGAGGGAGCGTTTGATGAGACGTGTTGGGAAGGGGAGTT ACCAGGAAATCTGTGTCAGAAGGGGCAACAAAAGGACCATCTGTCAGCCA TAGGAGACGGTGAAATGGAAGAGAGTGCACAGAAGGAGCAGGTGAAAGAC AAAGCAATGATAGATGGGATGTGTTATGCCTCTACCAGTACCAACCTGGA TGCATCAGATGAGACTCGTGTAGACTCTGATGAGATAGAAGTACCATACA ACCCACAGTATGCTGAAAAGGGAGCTGGTAGGCCATGTGAGCATGATGTC ACAACAAGTACAGAAGAGGAGGTTCTACATGAAAATTCAGGTTTTGATGA GTCTGTCAATGACAGCTATCTGCTGTTGGCAGAGCTGAATGACCATGATA CAGCTTCTTTTGCCCATTTTGATGATCAAAACCATGATGTATGCAGGAGG GATGGCAACCCAACTCACCAACACAGCAGTAGTAGTGATGACATACAGCA TCATGTGACGAAAACTTCATGTGATGACTTACCATATTCAGAGGGTCTGA ACACCTTTATAGACCAGTTGGACCAGCCTATGCAATATCCTCCAGAAAGA ATTTGTCAAACTGGCAACTATAAGGTTATGGCAGACTCAAATGCAGAAGA TCAAAACTCAAAGCATGATGAGAATATGGTACAACAAGAGAGGGAGATTT CTGATGCATCAAGAAGCTGCACCAACCTATCTGAAGACAATGGATTGGAT ATGAAACAAGAGCCAAACACAAATGTAGAAAATGTTGAAGAAGACAAAGA GATGCAGGCCATGTGGCAGGAGGATTTTCCATACTCTGAAGATCTGGATG CATTCTTGGCGGAAATGGATGAAAACATTACTGTAGAAAGTGAAAGAAAA GAGGAGGCAGGTGTGTTCGAAGAGCCAGTTCAGCAGCCCATTGAAGATGA AGTGGTTTTCTCAGTTGAGACAAATATAGACATTCATCCATGTAGGACAG AAACTGGTAGTACTTGTGACATGGAAGGTAGTAGAGGAAATTTATCCTTC CTTCACACTGACAAGAAAGGTGTAAACACTGACAAGAAAGGCAGAACAAA GTCTCTTTTTGAACAGTTGGTGAGACGGAAAACTCTTGTGGCTCTAGATA TTGCAGAAACCAGTCAAACAGCTGAGGTATTGACTAAAGGCAAAGGGACA GAGAAGAAAGAGTCTAGAAAAGATACTGGAGAAATTGATAGTGAACGTCA CAGCACATCACATGACAGAGATAAAATTGTCTCAGACTCTGATTCAGTTT TGTCTGTGACATCTTCAGTTAAGCAGTCATCACTAGAGAGATCAGATTCT GCTGTTTCCATTCCAGACTCTGAAAAAAGTCAGAAATCTTCAGGAAAGTT GCCAGCAGGCAAGAGCACGGTACAGTCGCAGTCACAGGACTCTATGGAGA ATGCAGTTTTTACGACTGCATTGGTGGAAAATCATGACTTCTCCATACTG TTTGATGACTCGTTTGGCCATCTGAGCGACACAGAGTCTCCTGACTCCTG CAGGAATAGTTGTGGGGATGCAGGGGGCATGAACGAGCTACCAGACACTC CTGCCCCCCCATCTAGAGCAGCTTCCCTGGCAAGACCCAGTAGAACAAGT ACGAGAAGTTTTAACTTAGTTCATACAGAAACGGCTCCAGTTACAAACAA TGGCAAAACCACAGCTGCTACAAGAATGCCAACAGAGCGCAATGGTGCAT GTTCTACACAGATTGAGTGCAGTAACCTCCAACCTCCATTGTCAAACAAT TTGAAAACTATGGCTGCTACAAGAATGCCAGCAGCATGCAATGGTGCAAA TCCTACACAGACAGAATGCAGTACCTTACATTCAGCTTACAGTGACTGCG ACAGCCCCGACAGTTCACCCAATGAGCTTGCAGACACCCCCCATGATAGC CGATGTAGGAGTTTCCTTTCCGTGAGAGGCATGCTGTCTTTCAACTCTAC AACTGATGATGGGAAGTGCTCGGACAGTGCCTACAGTAGCTCTCATACTC ACCTGTTGCCAAGTGATGAAAGAAAGAACATATCTGCTGAAGAACCAAAG CAAGAAACACAGAGAAGGAAGAGTGTCCACTTTTCAAGTCATTTAGAATC AGTGCACGAGATCAGCAAGCTGACAGGAACCAAGGAAGTGTTTGATGATT ACAGTGTCTCAAAATCTGTCTTAAAGACTCTCCCAACAGTTTCTCAATAT GCTTTGCCAAGGAAACCTGCCTGTCACAAGTACAGGAAATCCCCACTTCA GTCCATAGATAACTATGGCTGTGATGTTCAATATGAGGGGACCCCAGAAT TGTATTCCCAGAGGTTGATGAGTGACAAGAAAATGGTAAACAGCGTAACT AGCTATAGAATGAGGACACCAATGTCAAATGAGGGAACACCAAACTTCTT CTCACAAGTGTCCCCAACATCAGCCGACAGAAGAGGAGGGAAATCTACTA GAAAGAAATCAGTAGGTACAGATTCCACTCCCAACTTCTTTTCCCAGTTC TCACCGCACGACAGTGGCAGTGAAGGAATTATCCCGGGAACAGAGGACAG GCCATGCAGAAAAAGGGTTTCCTGCATGTTAAAGAATGTTATCAGCTACC CTACAGATGACACATACCAGGGCACTCCTGATATGTTTGAGGCTAGTTTG CATGGTGGCAATGAATGTGGTGATCTGGGGGCATCTCCTGATTTGTTTGG TGATTCTCCCATTCCAGACTCGCCGGCGAATGTGCGACACACCGGTGTCA TGTCGCTTTGCAAACGGCTTTTTCACAGACAGTAAAATGATGGCATGCCA TATTTACCTTCCAAGTCATTGTTTGTTGAAATAATAGGAAATTATAGTAT TGTTTCTTAAGTAGCCTTTTGGTGCCAAATTTGCATTGGTTACAGAGTTA GCGAGCAGGGAGAAGGTTAAAATTACCCATTTTGAAAATTTTATGTTTTG ACTTTCTTTTTTTGAATCTAGGATACGAATGTTACACAGTCACATAGAAA ACTTTCTCAACCCAAATGAATCATTCCTATTTGTCTGGCTATTACTAAAA ATCTGTGTTTTGCACACAGCCAGCTATGTCTGTCATGATGTCATGCTGCT TAATGAGTCTTGTACTGTGAGATAGTAGTGACAGTTACTTGCTGTAATGC CTACTTGGTATACATTGTCATTCATCATACTGTTATGTCTGAACTTTATT TACCATACACATGTACCACATTACATGTAGTAATAGCCTGAATTGAGTTT GCATTTACAGAAGAAGAACTTTATTGCACTACAATCGTACACGGTACATG TATGGCAACAACTATTAAACATGGTACAAAATAAAGGTATAGAATAGTGC AGCCATCGCAAATTATCATTAGACCAGAGCATTAAAATAATTGACTATTG AAACAGTTATGTACAATTTGGTTATCCACTAATAGTAATAGTAAAATTGG ACAAATGCACATGAATAAGCATGGAACATCACATGCAAAGTTAATTGTGT TCTGTTGCACCTATTACTATTTCATGATTGTAAAGTTCTTGTTTTCTGTG TCTCTGAGGTCAATCTTTGAAAATGATGGAAAGCTTTATCCGTACATGTA TATTCTATATATTAACAAATTATGAAGAACAAATAAACAAAACTGTGCAG

Coding sequence (CDS) from alignment at Sc0000104:607045..613694+

>transcript:BL78669_cuf1 ID=transcript:BL78669_cuf1|Name=transcript:BL78669_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=7680bp|location=Sequence derived from alignment at Sc0000104:607045..613694+ (Branchiostoma lanceolatum)
ATGAGATGCCACGCTGTGTACACAGGTACAGACATCAAGTACAGGTACTG
CCTCAATCTCACCATCGCAGACAACGAGACCTTGTGTGACGTTGCTGTGT
TTGGGACCTGTTTGGAACCTTTCCTGGGGATCAGTGCAAATGGACTCAAG
AGTTTTCTTTATGAACATCTGAAAACAAGCAAGGCCTCAACATTCAATGA
TCCAGACTCCCTCCTACACAAGGCACTACAGAATTCTCTCGTTGGATTGA
TGTTCCTATTTGGGTTCAAGGTTAAATGTGAAAGGTCAAGGTCACAGAGG
GAGCGACACTCGCCTGTCAGGATAAGCAACATCTTAGAGAAGAGCTACCA
GCAGAGGAACGGGCACCACGGCAAATTACCTCAACTTGTGGCTCACCAGA
TGGTCCATGCCAATAGAGACACGCCGTTTGTAAGTGTGCTAGATTTGCTC
AAACAGATTCTGAAAACCTACACTGAAGACAACAAAGTGAGAGAAGGTAG
TAGAGAATTTGGTGTTCCTAGAAACACACTGCCATCCAGAAAGAGTGTGA
GCAACTCTGATATCTCATGGTGTTCAACCAGCAGTTCTAGAGCTTCGTTT
GGACAGTCTATGTCAAGAGTGAGCCTCGGTCAGCAGTCGTTGGTTCTGAG
CTGTGATGAAAGTGGGAGTGAGAGTCTGATATCTTCCAGCATGTCGGATG
ACTTACAGAGTGAACCAATGGAGAAAACTGACTCTATTGCCCACCACAGC
TCTCAGGATGAGACATATTTTGAAGAAAACCTGGAAAGTGAGTCTTATAG
ATGGCAGGCAAATGACTATAGACAAAATGAGGTTTCTGATACTGATATAG
TAGGTATACATGAAAAAATGGAAAATAGAACATGCTCAGCAACCACACAT
GGTGAGATAAATGTCAATGTTGAGGACAATGTTGATGTGCCGGATGAAAA
GCATGAAGGATATAATCAAGAGCACTCGAACACTAGCAGATGTGAGAATA
TGTCATCTCAGCTCCTGGAGGGAGCGTTTGATGAGACGTGTTGGGAAGGG
GAGTTACCAGGAAATCTGTGTCAGAAGGGGCAACAAAAGGACCATCTGTC
AGCCATAGGAGACGGTGAAATGGAAGAGAGTGCACAGAAGGAGCAGGTGA
AAGACAAAGCAATGATAGATGGGATGTGTTATGCCTCTACCAGTACCAAC
CTGGATGCATCAGATGAGACTCGTGTAGACTCTGATGAGATAGAAGTACC
ATACAACCCACAGTATGCTGAAAAGGGAGCTGGTAGGCCATGTGAGCATG
ATGTCACAACAAGTACAGAAGAGGAGGTTCTACATGAAAATTCAGGTTTT
GATGAGTCTGTCAATGACAGCTATCTGCTGTTGGCAGAGCTGAATGACCA
TGATACAGCTTCTTTTGCCCATTTTGATGATCAAAACCATGATGTATGCA
GGAGGGATGGCAACCCAACTCACCAACACAGCAGTAGTAGTGATGACATA
CAGCATCATGTGACGAAAACTTCATGTGATGACTTACCATATTCAGAGGG
TCTGAACACCTTTATAGACCAGTTGGACCAGCCTATGCAATATCCTCCAG
AAAGAATTTGTCAAACTGGCAACTATAAGGTTATGGCAGACTCAAATGCA
GAAGATCAAAACTCAAAGCATGATGAGAATATGGTACAACAAGAGAGGGA
GATTTCTGATGCATCAAGAAGCTGCACCAACCTATCTGAAGACAATGGAT
TGGATATGAAACAAGAGCCAAACACAAATGTAGAAAATGTTGAAGAAGAC
AAAGAGATGCAGGCCATGTGGCAGGAGGATTTTCCATACTCTGAAGATCT
GGATGCATTCTTGGCGGAAATGGATGAAAACATTACTGTAGAAAGTGAAA
GAAAAGAGGAGGCAGGTGTGTTCGAAGAGCCAGTTCAGCAGCCCATTGAA
GATGAAGTGGTTTTCTCAGTTGAGACAAATATAGACATTCATCCATGTAG
GACAGAAACTGGTAGTACTTGTGACATGGAAGGTAGTAGAGGAAATTTAT
CCTTCCTTCACACTGACAAGAAAGGTGTAAACACTGACAAGAAAGGCAGA
ACAAAGTCTCTTTTTGAACAGTTGGTGAGACGGAAAACTCTTGTGGCTCT
AGATATTGCAGAAACCAGTCAAACAGCTGAGGTATTGACTAAAGGCAAAG
GGACAGAGAAGAAAGAGTCTAGAAAAGATACTGGAGAAATTGATAGTGAA
CGTCACAGCACATCACATGACAGAGATAAAATTGTCTCAGACTCTGATTC
AGTTTTGTCTGTGACATCTTCAGTTAAGCAGTCATCACTAGAGAGATCAG
ATTCTGCTGTTTCCATTCCAGACTCTGAAAAAAGTCAGAAATCTTCAGGA
AAGTTGCCAGCAGGCAAGAGCACGGTACAGTCGCAGTCACAGGACTCTAT
GGAGAATGCAGTTTTTACGACTGCATTGGTGGAAAATCATGACTTCTCCA
TACTGTTTGATGACTCGTTTGGCCATCTGAGCGACACAGAGTCTCCTGAC
TCCTGCAGGAATAGTTGTGGGGATGCAGGGGGCATGAACGAGCTACCAGA
CACTCCTGCCCCCCCATCTAGAGCAGCTTCCCTGGCAAGACCCAGTAGAA
CAAGTACGAGAAGTTTTAACTTAGTTCATACAGAAACGGCTCCAGTTACA
AACAATGGCAAAACCACAGCTGCTACAAGAATGCCAACAGAGCGCAATGG
TGCATGTTCTACACAGATTGAGTGCAGTAACCTCCAACCTCCATTGTCAA
ACAATTTGAAAACTATGGCTGCTACAAGAATGCCAGCAGCATGCAATGGT
GCAAATCCTACACAGACAGAATGCAGTACCTTACATTCAGCTTACAGTGA
CTGCGACAGCCCCGACAGTTCACCCAATGAGCTTGCAGACACCCCCCATG
ATAGCCGATGTAGGAGTTTCCTTTCCGTGAGAGGCATGCTGTCTTTCAAC
TCTACAACTGATGATGGGAAGTGCTCGGACAGTGCCTACAGTAGCTCTCA
TACTCACCTGTTGCCAAGTGATGAAAGAAAGAACATATCTGCTGAAGAAC
CAAAGCAAGAAACACAGAGAAGGAAGAGTGTCCACTTTTCAAGTCATTTA
GAATCAGTGCACGAGATCAGCAAGCTGACAGGAACCAAGGAAGTGTTTGA
TGATTACAGTGTCTCAAAATCTGTCTTAAAGACTCTCCCAACAGTTTCTC
AATATGCTTTGCCAAGGAAACCTGCCTGTCACAAGTACAGGAAATCCCCA
CTTCAGTCCATAGATAACTATGGCTGTGATGTTCAATATGAGGGGACCCC
AGAATTGTATTCCCAGAGGTTGATGAGTGACAAGAAAATGGTAAACAGCG
TAACTAGCTATAGAATGAGGACACCAATGTCAAATGAGGGAACACCAAAC
TTCTTCTCACAAGTGTCCCCAACATCAGCCGACAGAAGAGGAGGGAAATC
TACTAGAAAGAAATCAGTAGGTACAGATTCCACTCCCAACTTCTTTTCCC
AGTTCTCACCGCACGACAGTGGCAGTGAAGGAATTATCCCGGGAACAGAG
GACAGGCCATGCAGAAAAAGGGTTTCCTGCATGTTAAAGAATGTTATCAG
CTACCCTACAGATGACACATACCAGGGCACTCCTGATATGTTTGAGGCTA
GTTTGCATGGTGGCAATGAATGTGGTGATCTGGGGGCATCTCCTGATTTG
TTTGGTGATTCTCCCATTCCAGACTCGCCGGCGAATGTGCGACACACCGG
TGTCATGTCGCTTTGCAAACGGCTTTTTCACAGACAGTAAATGAGATGCC
ACGCTGTGTACACAGGTACAGACATCAAGTACAGGTACTGCCTCAATCTC
ACCATCGCAGACAACGAGACCTTGTGTGACGTTGCTGTGTTTGGGACCTG
TTTGGAACCTTTCCTGGGGATCAGTGCAAATGGACTCAAGAGTTTTCTTT
ATGAACATCTGAAAACAAGCAAGGCCTCAACATTCAATGATCCAGACTCC
CTCCTACACAAGGCACTACAGAATTCTCTCGTTGGATTGATGTTCCTATT
TGGGTTCAAGGTTAAATGTGAAAGGTCAAGGTCACAGAGGGAGCGACACT
CGCCTGTCAGGATAAGCAACATCTTAGAGAAGAGCTACCAGCAGAGGAAC
GGGCACCACGGCAAATTACCTCAACTTGTGGCTCACCAGATGGTCCATGC
CAATAGAGACACGCCGTTTGTAAGTGTGCTAGATTTGCTCAAACAGATTC
TGAAAACCTACACTGAAGACAACAAAGTGAGAGAAGGTAGTAGAGAATTT
GGTGTTCCTAGAAACACACTGCCATCCAGAAAGAGTGTGAGCAACTCTGA
TATCTCATGGTGTTCAACCAGCAGTTCTAGAGCTTCGTTTGGACAGTCTA
TGTCAAGAGTGAGCCTCGGTCAGCAGTCGTTGGTTCTGAGCTGTGATGAA
AGTGGGAGTGAGAGTCTGATATCTTCCAGCATGTCGGATGACTTACAGAG
TGAACCAATGGAGAAAACTGACTCTATTGCCCACCACAGCTCTCAGGATG
AGACATATTTTGAAGAAAACCTGGAAAGTGAGTCTTATAGATGGCAGGCA
AATGACTATAGACAAAATGAGGTTTCTGATACTGATATAGTAGGTATACA
TGAAAAAATGGAAAATAGAACATGCTCAGCAACCACACATGGTGAGATAA
ATGTCAATGTTGAGGACAATGTTGATGTGCCGGATGAAAAGCATGAAGGA
TATAATCAAGAGCACTCGAACACTAGCAGATGTGAGAATATGTCATCTCA
GCTCCTGGAGGGAGCGTTTGATGAGACGTGTTGGGAAGGGGAGTTACCAG
GAAATCTGTGTCAGAAGGGGCAACAAAAGGACCATCTGTCAGCCATAGGA
GACGGTGAAATGGAAGAGAGTGCACAGAAGGAGCAGGTGAAAGACAAAGC
AATGATAGATGGGATGTGTTATGCCTCTACCAGTACCAACCTGGATGCAT
CAGATGAGACTCGTGTAGACTCTGATGAGATAGAAGTACCATACAACCCA
CAGTATGCTGAAAAGGGAGCTGGTAGGCCATGTGAGCATGATGTCACAAC
AAGTACAGAAGAGGAGGTTCTACATGAAAATTCAGGTTTTGATGAGTCTG
TCAATGACAGCTATCTGCTGTTGGCAGAGCTGAATGACCATGATACAGCT
TCTTTTGCCCATTTTGATGATCAAAACCATGATGTATGCAGGAGGGATGG
CAACCCAACTCACCAACACAGCAGTAGTAGTGATGACATACAGCATCATG
TGACGAAAACTTCATGTGATGACTTACCATATTCAGAGGGTCTGAACACC
TTTATAGACCAGTTGGACCAGCCTATGCAATATCCTCCAGAAAGAATTTG
TCAAACTGGCAACTATAAGGTTATGGCAGACTCAAATGCAGAAGATCAAA
ACTCAAAGCATGATGAGAATATGGTACAACAAGAGAGGGAGATTTCTGAT
GCATCAAGAAGCTGCACCAACCTATCTGAAGACAATGGATTGGATATGAA
ACAAGAGCCAAACACAAATGTAGAAAATGTTGAAGAAGACAAAGAGATGC
AGGCCATGTGGCAGGAGGATTTTCCATACTCTGAAGATCTGGATGCATTC
TTGGCGGAAATGGATGAAAACATTACTGTAGAAAGTGAAAGAAAAGAGGA
GGCAGGTGTGTTCGAAGAGCCAGTTCAGCAGCCCATTGAAGATGAAGTGG
TTTTCTCAGTTGAGACAAATATAGACATTCATCCATGTAGGACAGAAACT
GGTAGTACTTGTGACATGGAAGGTAGTAGAGGAAATTTATCCTTCCTTCA
CACTGACAAGAAAGGTGTAAACACTGACAAGAAAGGCAGAACAAAGTCTC
TTTTTGAACAGTTGGTGAGACGGAAAACTCTTGTGGCTCTAGATATTGCA
GAAACCAGTCAAACAGCTGAGGTATTGACTAAAGGCAAAGGGACAGAGAA
GAAAGAGTCTAGAAAAGATACTGGAGAAATTGATAGTGAACGTCACAGCA
CATCACATGACAGAGATAAAATTGTCTCAGACTCTGATTCAGTTTTGTCT
GTGACATCTTCAGTTAAGCAGTCATCACTAGAGAGATCAGATTCTGCTGT
TTCCATTCCAGACTCTGAAAAAAGTCAGAAATCTTCAGGAAAGTTGCCAG
CAGGCAAGAGCACGGTACAGTCGCAGTCACAGGACTCTATGGAGAATGCA
GTTTTTACGACTGCATTGGTGGAAAATCATGACTTCTCCATACTGTTTGA
TGACTCGTTTGGCCATCTGAGCGACACAGAGTCTCCTGACTCCTGCAGGA
ATAGTTGTGGGGATGCAGGGGGCATGAACGAGCTACCAGACACTCCTGCC
CCCCCATCTAGAGCAGCTTCCCTGGCAAGACCCAGTAGAACAAGTACGAG
AAGTTTTAACTTAGTTCATACAGAAACGGCTCCAGTTACAAACAATGGCA
AAACCACAGCTGCTACAAGAATGCCAACAGAGCGCAATGGTGCATGTTCT
ACACAGATTGAGTGCAGTAACCTCCAACCTCCATTGTCAAACAATTTGAA
AACTATGGCTGCTACAAGAATGCCAGCAGCATGCAATGGTGCAAATCCTA
CACAGACAGAATGCAGTACCTTACATTCAGCTTACAGTGACTGCGACAGC
CCCGACAGTTCACCCAATGAGCTTGCAGACACCCCCCATGATAGCCGATG
TAGGAGTTTCCTTTCCGTGAGAGGCATGCTGTCTTTCAACTCTACAACTG
ATGATGGGAAGTGCTCGGACAGTGCCTACAGTAGCTCTCATACTCACCTG
TTGCCAAGTGATGAAAGAAAGAACATATCTGCTGAAGAACCAAAGCAAGA
AACACAGAGAAGGAAGAGTGTCCACTTTTCAAGTCATTTAGAATCAGTGC
ACGAGATCAGCAAGCTGACAGGAACCAAGGAAGTGTTTGATGATTACAGT
GTCTCAAAATCTGTCTTAAAGACTCTCCCAACAGTTTCTCAATATGCTTT
GCCAAGGAAACCTGCCTGTCACAAGTACAGGAAATCCCCACTTCAGTCCA
TAGATAACTATGGCTGTGATGTTCAATATGAGGGGACCCCAGAATTGTAT
TCCCAGAGGTTGATGAGTGACAAGAAAATGGTAAACAGCGTAACTAGCTA
TAGAATGAGGACACCAATGTCAAATGAGGGAACACCAAACTTCTTCTCAC
AAGTGTCCCCAACATCAGCCGACAGAAGAGGAGGGAAATCTACTAGAAAG
AAATCAGTAGGTACAGATTCCACTCCCAACTTCTTTTCCCAGTTCTCACC
GCACGACAGTGGCAGTGAAGGAATTATCCCGGGAACAGAGGACAGGCCAT
GCAGAAAAAGGGTTTCCTGCATGTTAAAGAATGTTATCAGCTACCCTACA
GATGACACATACCAGGGCACTCCTGATATGTTTGAGGCTAGTTTGCATGG
TGGCAATGAATGTGGTGATCTGGGGGCATCTCCTGATTTGTTTGGTGATT
CTCCCATTCCAGACTCGCCGGCGAATGTGCGACACACCGGTGTCATGTCG
CTTTGCAAACGGCTTTTTCACAGACAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL78669gene:BL78669Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL78669_cuf1transcript:BL78669_cuf1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL78669_cuf1-E1BL78669_cuf1-E1-1564476830-305903Branchiostoma lanceolatumexon
BL78669_cuf1-E2BL78669_cuf1-E2-1564476830-305905Branchiostoma lanceolatumexon
BL78669_cuf1-E3BL78669_cuf1-E3-1564476830-305908Branchiostoma lanceolatumexon
BL78669_cuf1-E4BL78669_cuf1-E4-1564476830-305911Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000104genomeSc0000104:607045..613694 +
Properties
Property NameValue
Transcript idBL78669_cuf1
Biotypeprotein_coding