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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL78578_cuf0 >transcript:BL78578_cuf0-protein ID=transcript:BL78578_cuf0-protein|Name=transcript:BL78578_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=197bp
MWLLISLFIVSSVYTSSFICEPLNNMTSPRLMQNKKGLNLAHVNGCSLRN
KVVDLECLLSNNNVHLIGISETHLDANIRDGELQIPNYDIIRLNRNNRGG
GVAFYIRNHIPYKVRSDLTMDGVEMLWIQVHLPFSKPILAAVLYRPPGSN
RAYFDSLLMCIGKASRENLEMCVLGDFNIDWNVASPMKEDLLNCATG Run BLAST on NCBI mRNA from alignment at Sc0000137:810756..812155+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL78578_cuf0 ID=transcript:BL78578_cuf0|Name=transcript:BL78578_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1400bp|location=Sequence derived from alignment at Sc0000137:810756..812155+ (Branchiostoma lanceolatum)
GTCACCAAACAAGATGGCTGCTGTCATGGGGAGTTCTCTGCAGTGAGGAT
AGAACTCCATCACAATCCTCCTCCAGAGTAGCCCTTACAGGTCTGCACTC
TTGTCAGTTGATATTTTAGATAGGGTTTCAAGTTTTCTTGTGTTTATTGT
GTTGATTTTGTTTTGTTAGATAGCCATATTTCCAACGTCAGTCTCTGCCC
CTCCCACCGACATCCATGCCGGATGGATAGTGGCGATTACGCTCTTTATT
CTTTGAGTTTATCAATTTTTTCTTCATTTTCTGGAAAACCTGCAACTTGA
AGTCAACATATGATCAGACAAATAGAATTGCTGGCTTGCACAGTTCAATA
GAGCATCGAATAAGTGTGCTTAGTACACCCCCTCCCACCTCAAGGATGTG
GCTTCTCATCAGTCTGTTTATCGTCAGTTCAGTCTACACATCTTCTTTCA
TCTGTGAACCGTTGAACAACATGACCTCGCCCAGACTCATGCAGAACAAA
AAGGGCCTAAATCTAGCCCATGTAAACGGGTGCAGCCTGAGGAACAAAGT
CGTCGACTTGGAATGCCTTCTCAGTAACAACAATGTGCACCTAATCGGTA
TCAGTGAAACTCACCTCGATGCAAACATCCGAGATGGTGAGCTACAGATT
CCAAACTACGACATCATTAGACTCAACAGGAACAATCGTGGAGGAGGGGT
AGCCTTCTACATCAGAAATCACATTCCATACAAGGTACGATCAGACTTGA
CAATGGATGGGGTGGAGATGCTCTGGATTCAAGTTCATTTGCCATTTTCC
AAGCCAATACTGGCTGCAGTTCTCTACAGACCTCCAGGATCTAATCGAGC
GTACTTTGACTCACTTCTCATGTGCATAGGGAAGGCATCTAGGGAAAACT
TGGAAATGTGTGTGCTTGGCGATTTTAACATCGATTGGAATGTAGCTTCA
CCCATGAAAGAAGACTTACTAAACTGTGCCACAGGGTAAAATCTGACTCA
AATCGTCAGTGTGCCTACACGAAAGAGCCTGAATAAACATGGGTAAGTAA
CATCAACGTGTATTGACCTTGTATTCGTCACATCTCCAACCATGTACAGC
AAAGCGAAGGCAACATCCTGGGGTTGTCAGTACAGACCATGACATCATCA
CTGTTACAAGGAACACTAAAGTGCCGAAACAACCACCTCGAGCAAAATAT
AAACGAAGTTATAAGACTTTTGACACAAATGACTTTATTGATGATATTAT
GTCCGCACCTTGGAATGTTGTAGAATTGTTTGATGATGTTGAGGATTCAG
TGTATGTTTTCACTACCATTTTTAACACGATAGCCAATTTCCATGCACCC
GTAAGGCGTTTTACGGTCCGGTCTAATCAGGTTCCGTGGTTAGATGCAGA
Coding sequence (CDS) from alignment at Sc0000137:810756..812155+ >transcript:BL78578_cuf0 ID=transcript:BL78578_cuf0|Name=transcript:BL78578_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=594bp|location=Sequence derived from alignment at Sc0000137:810756..812155+ (Branchiostoma lanceolatum)
ATGTGGCTTCTCATCAGTCTGTTTATCGTCAGTTCAGTCTACACATCTTC
TTTCATCTGTGAACCGTTGAACAACATGACCTCGCCCAGACTCATGCAGA
ACAAAAAGGGCCTAAATCTAGCCCATGTAAACGGGTGCAGCCTGAGGAAC
AAAGTCGTCGACTTGGAATGCCTTCTCAGTAACAACAATGTGCACCTAAT
CGGTATCAGTGAAACTCACCTCGATGCAAACATCCGAGATGGTGAGCTAC
AGATTCCAAACTACGACATCATTAGACTCAACAGGAACAATCGTGGAGGA
GGGGTAGCCTTCTACATCAGAAATCACATTCCATACAAGGTACGATCAGA
CTTGACAATGGATGGGGTGGAGATGCTCTGGATTCAAGTTCATTTGCCAT
TTTCCAAGCCAATACTGGCTGCAGTTCTCTACAGACCTCCAGGATCTAAT
CGAGCGTACTTTGACTCACTTCTCATGTGCATAGGGAAGGCATCTAGGGA
AAACTTGGAAATGTGTGTGCTTGGCGATTTTAACATCGATTGGAATGTAG
CTTCACCCATGAAAGAAGACTTACTAAACTGTGCCACAGGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000137 | genome | Sc0000137:810756..812155 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL78578_cuf0 |
| Biotype | protein_coding |
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