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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL78551_cuf0 >transcript:BL78551_cuf0-protein ID=transcript:BL78551_cuf0-protein|Name=transcript:BL78551_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=389bp
YNPANYRPVSLTCISCKILEHIVVSSMMQHFESHKILNDNQHGFRRGRSC
ESQLLELAEELTSNLEGGKQTDILILDFAKAFDRVNHSLLLHKLQCYGIK
GLPLTWITSFLNDRRQAVVVDGCHSPFVGVQSGVPQGSVLGPCLFLAYIN
DLPDKLTATSRLFADDTGVYKVTANAEQQEELQQDLQRLSEWESQWDMQF
HPSKCVSMSVTRSRNPLVSSYVLHGHTLDTVSTVNYLGVTLSRDMAWDTH
INNVTNKANRVLGFLRRNLKISSSSIKEKAYKSFVRPLLEYSATVWDPHT
RKNIVKLEAVQRRAARYVLGRYHNTSSVSSMLSSLGWKSLEERRRSARLT
ALYKIQHDMLRCPIIKSKLVTLPPRPRRTHNQQLQLINT Run BLAST on NCBI mRNA from alignment at Sc0000005:7911154..7912321- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL78551_cuf0 ID=transcript:BL78551_cuf0|Name=transcript:BL78551_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1168bp|location=Sequence derived from alignment at Sc0000005:7911154..7912321- (Branchiostoma lanceolatum)
GTACAATCCCGCCAATTATAGGCCGGTTTCGCTTACTTGTATTAGTTGTA
AAATCTTGGAACATATAGTTGTCAGCTCTATGATGCAGCACTTTGAGTCT
CATAAAATTCTCAACGACAATCAACATGGTTTTCGACGAGGGAGATCCTG
CGAGAGCCAACTACTAGAGCTTGCAGAGGAACTGACGTCCAACCTAGAGG
GGGGAAAGCAGACAGATATCCTAATATTGGATTTCGCGAAAGCTTTCGAC
CGGGTAAACCACAGCTTACTGTTACACAAACTTCAGTGCTATGGCATCAA
AGGCCTGCCCCTTACATGGATTACCAGTTTCCTCAATGATCGCCGTCAAG
CCGTAGTAGTTGATGGCTGTCACTCTCCTTTCGTCGGTGTCCAGTCAGGC
GTACCCCAGGGCTCTGTGTTAGGCCCATGCTTGTTCCTGGCCTACATTAA
TGATTTACCAGACAAGCTAACAGCGACGTCACGGTTGTTCGCAGACGATA
CTGGAGTGTACAAAGTCACAGCTAACGCCGAACAACAAGAAGAACTCCAG
CAAGACCTCCAACGCCTGTCCGAGTGGGAAAGTCAATGGGACATGCAGTT
CCATCCTTCCAAATGCGTGTCGATGTCAGTAACAAGGAGTAGGAATCCTC
TTGTGAGCTCCTACGTCCTACATGGACATACTTTGGACACAGTTAGTACA
GTTAACTACTTGGGTGTTACATTGAGCCGGGACATGGCCTGGGACACACA
CATCAATAACGTCACCAACAAGGCTAATAGAGTCCTTGGCTTCCTAAGGC
GCAACCTCAAGATAAGCTCGTCAAGCATAAAGGAGAAGGCATATAAGTCA
TTTGTGAGGCCCCTCCTTGAATACTCAGCCACAGTATGGGACCCCCACAC
CAGGAAGAACATCGTCAAGCTAGAAGCCGTACAGAGACGGGCAGCAAGGT
ACGTACTCGGCCGCTACCACAACACATCTAGTGTGAGTAGTATGTTAAGT
TCACTAGGGTGGAAGTCGTTAGAGGAACGTAGAAGGTCAGCACGCTTAAC
AGCACTGTATAAGATCCAACATGACATGTTGAGATGCCCCATCATTAAGA
GTAAATTGGTTACACTGCCACCGCGTCCGCGCCGTACCCACAACCAACAG
CTTCAGCTTATCAATACC Coding sequence (CDS) from alignment at Sc0000005:7911154..7912321- >transcript:BL78551_cuf0 ID=transcript:BL78551_cuf0|Name=transcript:BL78551_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1167bp|location=Sequence derived from alignment at Sc0000005:7911154..7912321- (Branchiostoma lanceolatum)
TACAATCCCGCCAATTATAGGCCGGTTTCGCTTACTTGTATTAGTTGTAA
AATCTTGGAACATATAGTTGTCAGCTCTATGATGCAGCACTTTGAGTCTC
ATAAAATTCTCAACGACAATCAACATGGTTTTCGACGAGGGAGATCCTGC
GAGAGCCAACTACTAGAGCTTGCAGAGGAACTGACGTCCAACCTAGAGGG
GGGAAAGCAGACAGATATCCTAATATTGGATTTCGCGAAAGCTTTCGACC
GGGTAAACCACAGCTTACTGTTACACAAACTTCAGTGCTATGGCATCAAA
GGCCTGCCCCTTACATGGATTACCAGTTTCCTCAATGATCGCCGTCAAGC
CGTAGTAGTTGATGGCTGTCACTCTCCTTTCGTCGGTGTCCAGTCAGGCG
TACCCCAGGGCTCTGTGTTAGGCCCATGCTTGTTCCTGGCCTACATTAAT
GATTTACCAGACAAGCTAACAGCGACGTCACGGTTGTTCGCAGACGATAC
TGGAGTGTACAAAGTCACAGCTAACGCCGAACAACAAGAAGAACTCCAGC
AAGACCTCCAACGCCTGTCCGAGTGGGAAAGTCAATGGGACATGCAGTTC
CATCCTTCCAAATGCGTGTCGATGTCAGTAACAAGGAGTAGGAATCCTCT
TGTGAGCTCCTACGTCCTACATGGACATACTTTGGACACAGTTAGTACAG
TTAACTACTTGGGTGTTACATTGAGCCGGGACATGGCCTGGGACACACAC
ATCAATAACGTCACCAACAAGGCTAATAGAGTCCTTGGCTTCCTAAGGCG
CAACCTCAAGATAAGCTCGTCAAGCATAAAGGAGAAGGCATATAAGTCAT
TTGTGAGGCCCCTCCTTGAATACTCAGCCACAGTATGGGACCCCCACACC
AGGAAGAACATCGTCAAGCTAGAAGCCGTACAGAGACGGGCAGCAAGGTA
CGTACTCGGCCGCTACCACAACACATCTAGTGTGAGTAGTATGTTAAGTT
CACTAGGGTGGAAGTCGTTAGAGGAACGTAGAAGGTCAGCACGCTTAACA
GCACTGTATAAGATCCAACATGACATGTTGAGATGCCCCATCATTAAGAG
TAAATTGGTTACACTGCCACCGCGTCCGCGCCGTACCCACAACCAACAGC
TTCAGCTTATCAATACC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:7911154..7912321 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL78551_cuf0 |
| Biotype | protein_coding |
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