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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL78530_cuf0 >transcript:BL78530_cuf0-protein ID=transcript:BL78530_cuf0-protein|Name=transcript:BL78530_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=208bp
MRRVLASILHHVGEDPNTYFMPASDDPAASDDPAASDDPTASDDPTASDD
PTASDDPTASDDPTVSDNPTASDDPTVALNEPATASNSPIVANILSHSLS
LSDFSRLASPNPSPLPNATFTMSPAYSQPITSSPVTSSPVTSSPVTYSSP
IIPEQEQSPIIQDLRRPSPPVYRRAKQKRLPTPRAPSKRAKKAKVSYTPS
THRKSSRK Run BLAST on NCBI mRNA from alignment at Sc0000018:3265107..3267288- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL78530_cuf0 ID=transcript:BL78530_cuf0|Name=transcript:BL78530_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2182bp|location=Sequence derived from alignment at Sc0000018:3265107..3267288- (Branchiostoma lanceolatum)
AAAAACATTGTTAAAAAAACTGCTAAAAATATATAATGATACTCATGTGC
ATCAGTGATCTGGGGTTTTCCGTCGAGCATCCATATTCCTGACCGCCAAG
AACAAGGAAGCGTGAAACATGAAGTTCGGAGGCTTCATGTACGACAGCTG
TGACTTCATCCTGGCGAGACCGGAGTTGGCTTGCTCGTTGACCTGGGAGT
TGATAGTGCGGATGTCCACTGAAGCGGAGTAGCTGTCCATACAATACCCA
AGTGAGCAACCGACATGGCCTTTCCAGTGGAACCTGTCAACAAGAAATTG
AGTCTTCTTGAAGAAGTGCGGATCCCTGTTCATCACATACCTGTGCAGCT
GGCAGGCGTTGTCGTACACGATGGTTCTAGGTGCCGTCTTGAACCGCGTC
CTGATGATCTCGTACAGACTGGGCCGGGGCAATGAGGCGGGTGCTTGCCA
GCATTCTTCACCATGTCGGGGAAGACCCCAACACGTACTTCATGCCCGCC
TCCGACGATCCCGCCGCCTCCGACGATCCCGCCGCCTCCGACGATCCCAC
CGCCTCCGACGATCCCACCGCCTCCGACGATCCCACCGCCTCCGACGATC
CCACCGCCTCCGACGATCCCACCGTCTCCGACAATCCCACCGCCTCCGAC
GATCCCACCGTCGCCCTCAACGAACCTGCCACCGCCTCCAATAGTCCCAT
CGTCGCCAACATCCTCTCTCACAGCCTCTCTCTGTCCGACTTTTCACGAC
TAGCCTCACCAAACCCCTCCCCATTGCCCAACGCAACGTTCACCATGTCC
CCCGCCTATTCTCAACCCATCACCTCATCGCCAGTCACCTCATCGCCAGT
CACCTCATCGCCAGTCACCTACAGCTCACCCATCATTCCGGAACAGGAAC
AGTCACCCATCATTCAGGATCTACGCCGCCCTTCACCACCCGTGTACCGT
CGAGCCAAACAGAAGAGACTGCCAACCCCCAGAGCCCCCAGTAAACGGGC
AAAAAAGGCGAAAGTAAGTTATACGCCTTCAACCCACCGTAAATCATCCC
GCAAGTAGATTTGTATGTTTTTTCTTTGTTCTATATAGTTAGAAGTTGAT
TTCATAACGTTTTCCAATTTAGCATGAAAGTTCATCTGAGTTGGTAAAAG
TCATTATGGGCCAAACTCGATTTCCTGATTTGTACCTAATCGCTTTTTGT
ATGTTGATATAGTATGTTTTGATGTTTTATGTGCAGTTAGCAAGATATTG
ATAATTATTACTTTTGAAATATGTTCGTCGTAAAATCTCAGATGTTTTCT
GAAATAGTCGGCTCGTACAAACTGCAATGATTCCTGGGATAGCATCATAT
TTTCATGGTCGCCATTTTGTTTGAATTTTTGTTGTTGTGGTGAAGGTCTA
CGTAGTTTCAGTCTGATTTATCGGACCCCGACTTTAGTGTAATGTTCGCT
TTATAGAAGTAATTCTGCCGTGAGTAGAGTAGCTTCAGCAGGAAATCTTT
GCCATGGTCGTGAATAAAGGATGTATTATTTGTACAATAGATTCTGAAAC
TGGAGCAAATAATGTACTTAGAACACACACTATCCCATTCTTGCCACTAT
TTTGTCATAATGCATTTGTATCGATTTGTTATTATTCTCAGCCCCGTAAT
AAGGTCCTGTAACAGAAAAAAAACAGAATGTTAATGATATAAACGATTAT
AAAGAAAGCAACAATTGCTGGCTAATTGTTACCCATACACGATAAGTTTC
GTAAATATGCACTTCGCTCCACCTCTGGTTGGACGAATACACTTACTCCT
TGGTCTGTGCGTGTTTTGTACTACGATTCGCTGACTACAAGCATCATAAT
TTAAACTTTAACAGAATGGCTAAATCGCAAGACGATACTCGGGTCCGTGT
TTCGTAAATATGCGCTTCGCTGCCACCGCTGGTTGGACATATAGTTACGT
AACTCATGCTGTCAGTACATTGCGGGCCTCGCGTTGTCCCTTCCGGGTGG
ACGAATTCGAGATCTCGAGTTTCGCCCCCCGGTGGCGCTATTCGTGCCAT
GTCAGTGCCGGTTTTGTATTACGCTTCGAGCTACCGCTTCCGCGTGGACG
AATTCGAGATCTCGAGTTTAGCCCCCCGGTGGCGCTTTGCGCGCCACGAA
TTGCGCCTCTACGTGGCGCAATTCGTATCTCG Coding sequence (CDS) from alignment at Sc0000018:3265107..3267288- >transcript:BL78530_cuf0 ID=transcript:BL78530_cuf0|Name=transcript:BL78530_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=627bp|location=Sequence derived from alignment at Sc0000018:3265107..3267288- (Branchiostoma lanceolatum)
ATGAGGCGGGTGCTTGCCAGCATTCTTCACCATGTCGGGGAAGACCCCAA
CACGTACTTCATGCCCGCCTCCGACGATCCCGCCGCCTCCGACGATCCCG
CCGCCTCCGACGATCCCACCGCCTCCGACGATCCCACCGCCTCCGACGAT
CCCACCGCCTCCGACGATCCCACCGCCTCCGACGATCCCACCGTCTCCGA
CAATCCCACCGCCTCCGACGATCCCACCGTCGCCCTCAACGAACCTGCCA
CCGCCTCCAATAGTCCCATCGTCGCCAACATCCTCTCTCACAGCCTCTCT
CTGTCCGACTTTTCACGACTAGCCTCACCAAACCCCTCCCCATTGCCCAA
CGCAACGTTCACCATGTCCCCCGCCTATTCTCAACCCATCACCTCATCGC
CAGTCACCTCATCGCCAGTCACCTCATCGCCAGTCACCTACAGCTCACCC
ATCATTCCGGAACAGGAACAGTCACCCATCATTCAGGATCTACGCCGCCC
TTCACCACCCGTGTACCGTCGAGCCAAACAGAAGAGACTGCCAACCCCCA
GAGCCCCCAGTAAACGGGCAAAAAAGGCGAAAGTAAGTTATACGCCTTCA
ACCCACCGTAAATCATCCCGCAAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000018 | genome | Sc0000018:3265107..3267288 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL78530_cuf0 |
| Biotype | protein_coding |
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