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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77501_cuf0 >transcript:BL77501_cuf0-protein ID=transcript:BL77501_cuf0-protein|Name=transcript:BL77501_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=222bp
XTYRCEECSRQFSRLDHLKRHIRTHTGEKPYRCEECSKQFSQLDNLKTHM
QTHTGEKPYRCEECSRQFSYTSLLKKHMQTHTGEKPFMCGECSKQFSQLH
HLKTHMRTHTGEKPYKCGECSRQFSQLCHLKTHMQMHTGEKPYRCEECSR
QFSFPSHLKVHMRTHTGEKPYMCEECSKQFGQLGHLQKHMRTHTGGKPYK
CEECSRQFSCLKNLKKHMLTHK Run BLAST on NCBI mRNA from alignment at Sc0000042:149092..150535- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77501_cuf0 ID=transcript:BL77501_cuf0|Name=transcript:BL77501_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1444bp|location=Sequence derived from alignment at Sc0000042:149092..150535- (Branchiostoma lanceolatum)
AAANACTTACAGATGTGAGGAGTGCAGCAGGCAGTTCAGTAGGCTGGACC
ATCTTAAGAGGCATATACGGACTCACACAGGGGAGAAACCCTACAGGTGT
GAGGAGTGTAGCAAGCAGTTCAGTCAGCTGGATAATCTGAAGACTCACAT
GCAGACTCATACAGGGGAGAAACCCTACAGATGTGAGGAGTGCAGCAGGC
AGTTCAGTTATACATCTCTTCTAAAGAAACACATGCAAACTCACACAGGG
GAGAAACCTTTCATGTGTGGGGAGTGCAGTAAGCAGTTCAGTCAACTGCA
TCATCTGAAGACTCACATGCGGACTCATACAGGGGAGAAACCCTACAAAT
GTGGGGAGTGCAGCAGGCAGTTTAGTCAGCTATGTCATTTAAAGACTCAC
ATGCAAATGCACACTGGGGAGAAGCCCTACAGGTGTGAGGAGTGCAGCAG
GCAGTTCAGTTTTCCATCTCATCTGAAGGTACACATGCGGACTCACACAG
GGGAGAAACCCTACATGTGTGAGGAGTGCAGTAAGCAGTTTGGTCAGCTG
GGTCATCTTCAGAAACACATGAGAACTCACACAGGTGGGAAACCCTACAA
GTGTGAGGAGTGCAGCAGGCAGTTCAGTTGTCTGAAAAATCTGAAGAAAC
ACATGCTTACTCACAAGTGAGATACCCGGCAGTTTTGAGTGGAATGAGTA
GTGAGTCATATAAACGGTAAAACCCCAGACAGGTAAGAAACTCTGGTAGT
GTGAGGAATGCAGTTTGCACGTTCAATTTTTTTCCTATAGAGATGGCCAA
TGTTAACACTTTTTAGTTATGTTTTCTTAGAATTAGAATTCTTGTTTATT
TAATAATGGTTGTAGGTGATAGAATTTGTGCAGGTAATCATAAATGGATA
GAGAAAGGCTGGTGGTGTTGTTGGTATTGTCTATCTGTATCCAAAACATT
TTGTTGTAAATGTAACACATGTTGAACCAGAATCCACTTGTTAGAGAGCC
TAATGTACATATACGAGTTTGGTAGGGACCTTTTTTCATCTTTGGTTTTG
TTAACAAGTGTTGGCTCAAGCTATTTTTGGTTGTTGTAAGTAAAGGTTCT
TTTTTAATCTTACACTTTTCCTGATGTACGAGATGATAAATGTGCGGGTC
TTAGCTAACCTCAGTTTGCACGTTGAATTTTTTTTCTATAGAGATGGCCA
ATGTTAGATTCTAACACTTTTTAGTTATATTTTCTTAGAATTATAATTTG
GATTTTATTGTTTATTTAATAATGGTTGTAGGTGATACAATCAGTGCAGG
TAATTGTAAATGGATGGAGAAAGGCTGGTGGTGGTGTTGGTATTGTCTAT
CTGTTATTCTGTATCCAATACATTTTGTTGTAAATGTAACACATGTTTGG
TAGGGACCTTTTGTTGTAAATAAAAGTTCTTTTTGAATCTTACA Coding sequence (CDS) from alignment at Sc0000042:149092..150535- >transcript:BL77501_cuf0 ID=transcript:BL77501_cuf0|Name=transcript:BL77501_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=669bp|location=Sequence derived from alignment at Sc0000042:149092..150535- (Branchiostoma lanceolatum)
AANACTTACAGATGTGAGGAGTGCAGCAGGCAGTTCAGTAGGCTGGACCA
TCTTAAGAGGCATATACGGACTCACACAGGGGAGAAACCCTACAGGTGTG
AGGAGTGTAGCAAGCAGTTCAGTCAGCTGGATAATCTGAAGACTCACATG
CAGACTCATACAGGGGAGAAACCCTACAGATGTGAGGAGTGCAGCAGGCA
GTTCAGTTATACATCTCTTCTAAAGAAACACATGCAAACTCACACAGGGG
AGAAACCTTTCATGTGTGGGGAGTGCAGTAAGCAGTTCAGTCAACTGCAT
CATCTGAAGACTCACATGCGGACTCATACAGGGGAGAAACCCTACAAATG
TGGGGAGTGCAGCAGGCAGTTTAGTCAGCTATGTCATTTAAAGACTCACA
TGCAAATGCACACTGGGGAGAAGCCCTACAGGTGTGAGGAGTGCAGCAGG
CAGTTCAGTTTTCCATCTCATCTGAAGGTACACATGCGGACTCACACAGG
GGAGAAACCCTACATGTGTGAGGAGTGCAGTAAGCAGTTTGGTCAGCTGG
GTCATCTTCAGAAACACATGAGAACTCACACAGGTGGGAAACCCTACAAG
TGTGAGGAGTGCAGCAGGCAGTTCAGTTGTCTGAAAAATCTGAAGAAACA
CATGCTTACTCACAAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:149092..150535 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77501_cuf0 |
| Biotype | protein_coding |
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