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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77322_cuf0 >transcript:BL77322_cuf0-protein ID=transcript:BL77322_cuf0-protein|Name=transcript:BL77322_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=144bp
MSSWSRFKASTAVDMSSWSRFKASTVVDSWRMSSWSRFKASTAVDMSSWS
RFKALTVVDMSSWSRFKASTVVHSWRMSSWSRFKASTAVDMSSWSRFKAS
TVVDSWRMSSLSRLKASTVVHSWRMSSWSRFKASTVVDTLSWLC Run BLAST on NCBI mRNA from alignment at Sc0000394:71653..73741- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77322_cuf0 ID=transcript:BL77322_cuf0|Name=transcript:BL77322_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2089bp|location=Sequence derived from alignment at Sc0000394:71653..73741- (Branchiostoma lanceolatum)
GAAGCGAATACTAGTTTTGCATGGTACGTCGGCCCACTTGTCTTTCCAGG
GTGAGACTGCGGAGTAATATACGCAATCTTTGTTGCTCTGTCGGTTGTTG
GGTTGTCCCTCACCCCAAGAGTTGTACGTCCCAAGTGCAGAACCATCCAC
CCACTCAAAGCTTCCCTCTTTACGCCGATCGTGCAGACCGAACCAGAAGG
GCGAGTAGCCGTTCACGGACTTGTACAAGGAGATCAGGAAGGTGTTGGTC
TCAGAGTCTCGGGGCATGGCGAGGGTGCCGCCGTCGTCATGACAGGTCGC
GCTCGCATCGCTGAAAGTCTTACGTCTGTTGAAGGCTTTGTAACAGATTC
CACGCCACATCGTGTAACCTTTAGGACAGGATACTGAAATAAAATAGAGT
CAACGACAAACGTAGGGATGGATATTCAATTTCGTGATAATGAAATGGTC
CAGATATTCAATCGCTGACTAACCATTAGATTCATTTACTTCATTAGTGG
AAAATACGTTGTATAGTTTTATTTCAAAACCAGAATAACTAATATGAGAC
AGTAAAACACTATGTACACCTGTAAATACATTTCTAATGAGGAAATTTAA
AACAATGTGATGAGTTATGCCACAATATGTACTTTATCAATTAATGCAAA
TCATCCTGCATGGCAGATACATGACAAAGGCAGCTAAAGCCATTAAGTGT
GTTTACTTTTACGTGCACTTTTTCCATTAATGCAAAACATTCAGCAGGCA
TAGAGTCAATTCCATGCCTCAGACAGGGTTTTCAGATAATATTGCTAATA
AGCTTGAACAATTTTAGATAAAATACTATTTCGGTCAAAATTCTTCTAGA
GTGTTCAAACATTTAAGAATGTTAAGTTTGAACATGTTTGAACTTATCTA
TATATTTTGGAAATATTTTGAAAGTAATTGCACAAATATCTCTTTATTTA
GAACAATTTTCAAACATCTATGTGATTGTTTCACTGTTGGAACATGTTCC
AAAACTCTGCATCATTTTTCAAATGGTAGATTTTAGTTCTTGCCCCCATA
AAAGTAGGTGCTAATCGCATTACATTGTCTCTCTCTGTCACGTCTGGAAA
CTGGCAACTCTTTTGTCTTGAGGTGTCTATGCCTGGCACCTAGGCCTAAC
CCCTATACTTTGAAGGAATGTGTGAATTGCCCTGTTCCCAGCCCACTGAC
CCAGTTACACAATGTTTGTATAATGTTGGAACATGTTGGAACAAATTATG
AATCTATGTTGCAACAGTTAACTAATACAAATAACATGTGCAATGTTAGA
AATTTGTCTAACATGTTGGAACACAGTAGAAACTATTTAGAACATCAAAT
AAATGTTGGAAATTGTTCTAAACAGTTACCTATCTCACTTAGATTGTTAC
AAAGGTTTTGAAAATGTTAGAACAAAAGGCAAAAACACCCACACGGTAAT
GTGGAATTGACTAGGAACTATATATTAATGATTGAAATATTATGAATGCA
AAACTATATCACCATAAATAGTACACATAATAGCTGAACCCGAACTTACC
TGGCATCTTACTCATTTCGTGAAGACGCTGCTCCAAGGCGGCGACTCGGT
TTCGCTCCTTGTCCTGATTGACTTTCAATGCGTCACCTGTGGTGCACAGT
TGGCACATGTCGTCTTGGTCGCGCTTCAAGGCGTCAACAGCGGTGGACAT
GTCGTCTTGGTCGCGCTTCAAGGCGTCAACAGTGGTGGACAGTTGGCGCA
TGTCGTCTTGGTCGCGCTTCAAGGCGTCAACAGCGGTGGACATGTCGTCT
TGGTCGCGCTTCAAGGCGTTAACAGTGGTGGACATGTCGTCTTGGTCGCG
CTTCAAGGCGTCAACAGTGGTGCACAGTTGGCGCATGTCATCTTGGTCGC
GCTTCAAGGCGTCAACAGCGGTGGACATGTCGTCTTGGTCGCGCTTCAAG
GCGTCAACAGTGGTGGACAGTTGGCGCATGTCGTCTTTGTCACGCTTAAA
GGCGTCAACAGTGGTGCACAGTTGGCGCATGTCGTCTTGGTCGCGCTTCA
AGGCGTCAACAGTGGTGGACACGTTGTCTTGGTTGTGCT Coding sequence (CDS) from alignment at Sc0000394:71653..73741- >transcript:BL77322_cuf0 ID=transcript:BL77322_cuf0|Name=transcript:BL77322_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=432bp|location=Sequence derived from alignment at Sc0000394:71653..73741- (Branchiostoma lanceolatum)
ATGTCGTCTTGGTCGCGCTTCAAGGCGTCAACAGCGGTGGACATGTCGTC
TTGGTCGCGCTTCAAGGCGTCAACAGTGGTGGACAGTTGGCGCATGTCGT
CTTGGTCGCGCTTCAAGGCGTCAACAGCGGTGGACATGTCGTCTTGGTCG
CGCTTCAAGGCGTTAACAGTGGTGGACATGTCGTCTTGGTCGCGCTTCAA
GGCGTCAACAGTGGTGCACAGTTGGCGCATGTCATCTTGGTCGCGCTTCA
AGGCGTCAACAGCGGTGGACATGTCGTCTTGGTCGCGCTTCAAGGCGTCA
ACAGTGGTGGACAGTTGGCGCATGTCGTCTTTGTCACGCTTAAAGGCGTC
AACAGTGGTGCACAGTTGGCGCATGTCGTCTTGGTCGCGCTTCAAGGCGT
CAACAGTGGTGGACACGTTGTCTTGGTTGTGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000394 | genome | Sc0000394:71653..73741 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77322_cuf0 |
| Biotype | protein_coding |
|
