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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77295_cuf2 >transcript:BL77295_cuf2-protein ID=transcript:BL77295_cuf2-protein|Name=transcript:BL77295_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=225bp
MPHLLWEIFAAEKLKAALLGKRRSRHRSSKKVYLKKVEPRHLTDLKQTAH
GKRSPTPELKFKVKERSTITRYYRLREVVTMLLLIFFLLYYCLCPVHRLE
NIYDSFECIVSDVAVTCSLGSGQTLRMAWITNITILITGTLVLLYHVITT
FLWHDGKVGLENGGRSSKHHRETAYAEQQLSQAWDSCGTELNGSASDTKL
LAMFSESNPGLFMGYGNVKLAKSTV Run BLAST on NCBI mRNA from alignment at Sc0000008:2778301..2779485+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77295_cuf2 ID=transcript:BL77295_cuf2|Name=transcript:BL77295_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1185bp|location=Sequence derived from alignment at Sc0000008:2778301..2779485+ (Branchiostoma lanceolatum)
TGGAACAGAACCATGAGGCAAATATTTTCGCGAGGAAGCACAAAAGCCTT
TTGTCCCAAACGATCTTGACAGAAGAAAAAATGGGCACGTGCTTGTGAAT
GCTAATTAACTAGGGGAGCAATAAGACAAGAATGTTGTCCGCTTAGCCCG
TGAAATTTAGATAAGGCAGTGACCTACATAAATTGTTCGTCGAACTTGTA
GAAACTCGACACTTCATGATCTTGCATATGTTTTACAGGACCACCTGGCG
TGAAGTGTTACGCCACCTACTGTCGCCCGCAGAACTGCAGTCTCTACGCG
CTCCATGCGGCGCAGGTTGCTGAAGCATCCTGTCTGTCCAGCTCGGTCCA
ACCGCCGGTTTCCCGCCCGGACGGCCCGCTCAACCAGTACCTGATCCCGC
TGGCCTTCTTCATACAAGCCGTTCTCTGCTACATGCCGCATCTACTGTGG
GAAATATTCGCGGCGGAAAAGCTGAAGGCAGCTCTGCTCGGGAAAAGGCG
AAGCCGCCATCGTTCCTCCAAGAAAGTGTACTTGAAGAAGGTCGAGCCAC
GCCACCTAACGGATCTCAAACAAACTGCTCACGGCAAGCGTTCTCCTACT
CCAGAACTGAAGTTCAAAGTCAAGGAGAGAAGCACCATCACTAGATATTA
CCGTCTTAGAGAAGTTGTCACAATGCTGTTGCTCATTTTCTTCCTTTTGT
ACTATTGCCTTTGTCCTGTGCATCGTTTGGAAAACATCTACGATTCTTTC
GAATGCATCGTAAGTGACGTAGCCGTGACGTGTTCGCTTGGATCCGGACA
GACGTTGCGGATGGCCTGGATCACCAACATCACGATCCTGATCACGGGAA
CTCTCGTGCTCCTGTATCACGTGATCACCACGTTCCTGTGGCATGACGGG
AAGGTTGGGTTAGAAAATGGCGGCAGAAGTTCGAAACACCACAGGGAGAC
GGCGTACGCTGAACAGCAGCTGAGCCAAGCGTGGGATTCGTGTGGCACGG
AGTTGAACGGTTCTGCGAGCGACACAAAACTGTTGGCCATGTTTTCAGAG
TCAAATCCAGGTCTTTTCATGGGATACGGTAACGTCAAACTGGCAAAATC
AACTGTCTGAAAATTTGTACCATGTTTTTTCAAGTTACTTATAAGATCTG
GAATTTTGTACAAATTTGTTCCTTCGGATACCAAT Coding sequence (CDS) from alignment at Sc0000008:2778301..2779485+ >transcript:BL77295_cuf2 ID=transcript:BL77295_cuf2|Name=transcript:BL77295_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=678bp|location=Sequence derived from alignment at Sc0000008:2778301..2779485+ (Branchiostoma lanceolatum)
ATGCCGCATCTACTGTGGGAAATATTCGCGGCGGAAAAGCTGAAGGCAGC
TCTGCTCGGGAAAAGGCGAAGCCGCCATCGTTCCTCCAAGAAAGTGTACT
TGAAGAAGGTCGAGCCACGCCACCTAACGGATCTCAAACAAACTGCTCAC
GGCAAGCGTTCTCCTACTCCAGAACTGAAGTTCAAAGTCAAGGAGAGAAG
CACCATCACTAGATATTACCGTCTTAGAGAAGTTGTCACAATGCTGTTGC
TCATTTTCTTCCTTTTGTACTATTGCCTTTGTCCTGTGCATCGTTTGGAA
AACATCTACGATTCTTTCGAATGCATCGTAAGTGACGTAGCCGTGACGTG
TTCGCTTGGATCCGGACAGACGTTGCGGATGGCCTGGATCACCAACATCA
CGATCCTGATCACGGGAACTCTCGTGCTCCTGTATCACGTGATCACCACG
TTCCTGTGGCATGACGGGAAGGTTGGGTTAGAAAATGGCGGCAGAAGTTC
GAAACACCACAGGGAGACGGCGTACGCTGAACAGCAGCTGAGCCAAGCGT
GGGATTCGTGTGGCACGGAGTTGAACGGTTCTGCGAGCGACACAAAACTG
TTGGCCATGTTTTCAGAGTCAAATCCAGGTCTTTTCATGGGATACGGTAA
CGTCAAACTGGCAAAATCAACTGTCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:2778301..2779485 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77295_cuf2 |
| Biotype | protein_coding |
|
